miRNEST 2.0, an integrative microRNA resource :: deep sequencing predictions

Please select library, species and/or miRNA sequence.

selected mature miRNA sequence: GAAGTTGTTCGTGGTGGATTCG

selected species: Mus musculus

18 records found

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
1	Mus musculus	GSM527274-2107	GAAGTTGTTCGTGGTGGATTCG	AATCATTCACGGACAACACTTTT	up	3	1

Secondary structure

CTTTTCTGTGGTACTTGAAGAGAAGTTGTTCGTGGTGGATTCGCTTTACTTGTGACGAATCATTCACGGACAACACTTTTTTCAGTACCAAATGCTAC
-TTTTCTGTGGTACTTGAAGA 	1
--------------------AGAAGTTGTTCGTGGTGGATTCG 	5
--------------------AGAAGTTGTTCGTGGTGGATT 	2
---------------------GAAGTTGTTCGTGGTGGATTCG 	3441
---------------------GAAGTTGTTCGTGGTGGATTC 	168
---------------------GAAGTTGTTCGTGGTGGATT 	140
---------------------GAAGTTGTTCGTGGTGGAT 	25
----------------------AAGTTGTTCGTGGTGGATTC 	9
----------------------AAGTTGTTCGTGGTGGATTCG 	290
----------------------AAGTTGTTCGTGGTGGATT 	3
----------------------AAGTTGTTCGTGGTGGATTCGCT 	1
----------------------AAGTTGTTCGTGGTGGATTCGC 	7
-----------------------AGTTGTTCGTGGTGGATTCGCTT 	3
-----------------------AGTTGTTCGTGGTGGATTCG 	64
-----------------------AGTTGTTCGTGGTGGATTCGCT 	57
-----------------------AGTTGTTCGTGGTGGATTC 	19
-----------------------AGTTGTTCGTGGTGGATTCGC 	73
------------------------GTTGTTCGTGGTGGATTCG 	9
---------------------------------------------------------AATCATTCACGGACAACAC 	5
---------------------------------------------------------AATCATTCACGGACAACACTTTT 	13
---------------------------------------------------------AATCATTCACGGACAACACTT 	44
---------------------------------------------------------AATCATTCACGGACAACACTTTTT 	5
---------------------------------------------------------AATCATTCACGGACAACACT 	11
---------------------------------------------------------AATCATTCACGGACAACACTTT 	485
----------------------------------------------------------ATCATTCACGGACAACACTTT 	16
----------------------------------------------------------ATCATTCACGGACAACACTT 	1
----------------------------------------------------------ATCATTCACGGACAACACTTTT 	10
-----------------------------------------------------------TCATTCACGGACAACACTT 	1
-----------------------------------------------------------TCATTCACGGACAACACTTT 	1

Overlaps with: MNEST033092
Overlaps with miRBase pre-miRNAs: cgr-mir-382 rno-mir-3592 rno-mir-382 mmu-mir-382
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
2	Mus musculus	GSM527280	GAAGTTGTTCGTGGTGGATTCG	AATCATTCACGGACAACACTTTT	up	3	1

Secondary structure

CTTTTCTGTGGTACTTGAAGAGAAGTTGTTCGTGGTGGATTCGCTTTACTTGTGACGAATCATTCACGGACAACACTTTTTTCAGTACCAAATGCTAC
--------------------AGAAGTTGTTCGTGGTGGATTCG 	2
---------------------GAAGTTGTTCGTGGTGGATTCG 	904
---------------------GAAGTTGTTCGTGGTGGATTC 	38
---------------------GAAGTTGTTCGTGGTGGATT 	49
---------------------GAAGTTGTTCGTGGTGGAT 	10
----------------------AAGTTGTTCGTGGTGGATTCG 	69
----------------------AAGTTGTTCGTGGTGGATTCGC 	1
----------------------AAGTTGTTCGTGGTGGATTC 	6
-----------------------AGTTGTTCGTGGTGGATTC 	3
-----------------------AGTTGTTCGTGGTGGATTCGCT 	19
-----------------------AGTTGTTCGTGGTGGATTCGC 	36
-----------------------AGTTGTTCGTGGTGGATTCG 	21
------------------------GTTGTTCGTGGTGGATTCG 	3
---------------------------------------------------------AATCATTCACGGACAACACTTTT 	19
---------------------------------------------------------AATCATTCACGGACAACACTT 	23
---------------------------------------------------------AATCATTCACGGACAACACTTTTT 	1
---------------------------------------------------------AATCATTCACGGACAACACT 	2
---------------------------------------------------------AATCATTCACGGACAACACTTT 	199
----------------------------------------------------------ATCATTCACGGACAACACTTT 	9
----------------------------------------------------------ATCATTCACGGACAACACTT 	1
----------------------------------------------------------ATCATTCACGGACAACACTTTT 	5
------------------------------------------------------------CATTCACGGACAACACTTT 	1

Overlaps with: MNEST033092
Overlaps with miRBase pre-miRNAs: cgr-mir-382 rno-mir-3592 rno-mir-382 mmu-mir-382
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
3	Mus musculus	GSM539868	GAAGTTGTTCGTGGTGGATTCG	AATCATTCACGGACAACACTTTT	up	3	1

Secondary structure

CTTTTCTGTGGTACTTGAAGAGAAGTTGTTCGTGGTGGATTCGCTTTACTTGTGACGAATCATTCACGGACAACACTTTTTTCAGTACCAAATGCTAC
---------------------GAAGTTGTTCGTGGTGGATTCG 	9
---------------------GAAGTTGTTCGTGGTGGATT 	1
----------------------AAGTTGTTCGTGGTGGATTCG 	3
---------------------------------------------------------AATCATTCACGGACAACACTTT 	1

Overlaps with: MNEST033092
Overlaps with miRBase pre-miRNAs: cgr-mir-382 rno-mir-3592 rno-mir-382 mmu-mir-382
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
4	Mus musculus	GSM539877-5198	GAAGTTGTTCGTGGTGGATTCG	AATCATTCACGGACAACACTTTT	up	3	1

Secondary structure

CTTTTCTGTGGTACTTGAAGAGAAGTTGTTCGTGGTGGATTCGCTTTACTTGTGACGAATCATTCACGGACAACACTTTTTTCAGTACCAAATGCTAC
---------------------GAAGTTGTTCGTGGTGGATTCG 	10
---------------------GAAGTTGTTCGTGGTGGATT 	1
----------------------AAGTTGTTCGTGGTGGATTC 	1
----------------------AAGTTGTTCGTGGTGGATT 	1
---------------------------------------------------------AATCATTCACGGACAACACTTT 	1
---------------------------------------------------------AATCATTCACGGACAACACTT 	3
---------------------------------------------------------AATCATTCACGGACAACACTTTT 	1

Overlaps with: MNEST033092
Overlaps with miRBase pre-miRNAs: cgr-mir-382 rno-mir-3592 rno-mir-382 mmu-mir-382
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
5	Mus musculus	GSM539835	GAAGTTGTTCGTGGTGGATTCG	AATCATTCACGGACAACACTTTT	up	3	1

Secondary structure

CTTTTCTGTGGTACTTGAAGAGAAGTTGTTCGTGGTGGATTCGCTTTACTTGTGACGAATCATTCACGGACAACACTTTTTTCAGTACCAAATGCTAC
---------------------GAAGTTGTTCGTGGTGGATTCG 	15
---------------------GAAGTTGTTCGTGGTGGATTC 	4
---------------------GAAGTTGTTCGTGGTGGATTCGC 	1
---------------------GAAGTTGTTCGTGGTGGATT 	2
----------------------AAGTTGTTCGTGGTGGATTCGC 	1
----------------------AAGTTGTTCGTGGTGGATTCG 	3
---------------------------------------------------------AATCATTCACGGACAACACTT 	3
---------------------------------------------------------AATCATTCACGGACAACACTTT 	1
---------------------------------------------------------AATCATTCACGGACAACAC 	2

Overlaps with: MNEST033092
Overlaps with miRBase pre-miRNAs: cgr-mir-382 rno-mir-3592 rno-mir-382 mmu-mir-382
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
6	Mus musculus	GSM539855	GAAGTTGTTCGTGGTGGATTCG	AATCATTCACGGACAACACTTTT	up	3	1

Secondary structure

CTTTTCTGTGGTACTTGAAGAGAAGTTGTTCGTGGTGGATTCGCTTTACTTGTGACGAATCATTCACGGACAACACTTTTTTCAGTACCAAATGCTAC
---------------------GAAGTTGTTCGTGGTGGATTCGC 	2
---------------------GAAGTTGTTCGTGGTGGATTCG 	158
---------------------GAAGTTGTTCGTGGTGGATTC 	23
---------------------GAAGTTGTTCGTGGTGGATT 	19
---------------------GAAGTTGTTCGTGGTGGAT 	8
----------------------AAGTTGTTCGTGGTGGATTCG 	12
----------------------AAGTTGTTCGTGGTGGATT 	1
----------------------AAGTTGTTCGTGGTGGATTC 	1
-----------------------AGTTGTTCGTGGTGGATTCGCT 	1
-----------------------AGTTGTTCGTGGTGGATTCG 	1
---------------------------------------------------------AATCATTCACGGACAACACTTT 	6
---------------------------------------------------------AATCATTCACGGACAACACTT 	25
---------------------------------------------------------AATCATTCACGGACAACACT 	2

Overlaps with: MNEST033092
Overlaps with miRBase pre-miRNAs: cgr-mir-382 rno-mir-3592 rno-mir-382 mmu-mir-382
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
7	Mus musculus	GSM527276	GAAGTTGTTCGTGGTGGATTCG	AATCATTCACGGACAACACTTTT	up	3	1

Secondary structure

CTTTTCTGTGGTACTTGAAGAGAAGTTGTTCGTGGTGGATTCGCTTTACTTGTGACGAATCATTCACGGACAACACTTTTTTCAGTACCAAATGCTAC
--------------------AGAAGTTGTTCGTGGTGGATT 	1
--------------------AGAAGTTGTTCGTGGTGGATTCG 	3
---------------------GAAGTTGTTCGTGGTGGATTCGC 	2
---------------------GAAGTTGTTCGTGGTGGATTCG 	2362
---------------------GAAGTTGTTCGTGGTGGATTC 	112
---------------------GAAGTTGTTCGTGGTGGATT 	117
---------------------GAAGTTGTTCGTGGTGGAT 	24
----------------------AAGTTGTTCGTGGTGGATT 	2
----------------------AAGTTGTTCGTGGTGGATTCGC 	1
----------------------AAGTTGTTCGTGGTGGATTCG 	198
----------------------AAGTTGTTCGTGGTGGATTC 	7
-----------------------AGTTGTTCGTGGTGGATTC 	12
-----------------------AGTTGTTCGTGGTGGATTCGCT 	52
-----------------------AGTTGTTCGTGGTGGATTCGC 	66
-----------------------AGTTGTTCGTGGTGGATTCG 	48
------------------------GTTGTTCGTGGTGGATTCG 	6
-------------------------------------------------------CGAATCATTCACGGACAACACTTT 	1
---------------------------------------------------------AATCATTCACGGACAACACTTTT 	20
---------------------------------------------------------AATCATTCACGGACAACACTT 	34
---------------------------------------------------------AATCATTCACGGACAACAC 	2
---------------------------------------------------------AATCATTCACGGACAACACTTTTT 	2
---------------------------------------------------------AATCATTCACGGACAACACT 	9
---------------------------------------------------------AATCATTCACGGACAACACTTT 	420
----------------------------------------------------------ATCATTCACGGACAACACTTT 	13
----------------------------------------------------------ATCATTCACGGACAACACTT 	1
----------------------------------------------------------ATCATTCACGGACAACACTTTT 	13
-----------------------------------------------------------TCATTCACGGACAACACTTTT 	1

Overlaps with: MNEST033092
Overlaps with miRBase pre-miRNAs: cgr-mir-382 rno-mir-3592 rno-mir-382 mmu-mir-382
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
8	Mus musculus	GSM539869	GAAGTTGTTCGTGGTGGATTCG	AATCATTCACGGACAACACTTTT	up	3	1

Secondary structure

CTTTTCTGTGGTACTTGAAGAGAAGTTGTTCGTGGTGGATTCGCTTTACTTGTGACGAATCATTCACGGACAACACTTTTTTCAGTACCAAATGCTAC
--------------------AGAAGTTGTTCGTGGTGGATT 	2
--------------------AGAAGTTGTTCGTGGTGGATTCG 	4
--------------------AGAAGTTGTTCGTGGTGGATTC 	6
---------------------GAAGTTGTTCGTGGTGGATTCG 	6849
---------------------GAAGTTGTTCGTGGTGGATTC 	1834
---------------------GAAGTTGTTCGTGGTGGATTCGCTTT 	1
---------------------GAAGTTGTTCGTGGTGGATTCGCT 	4
---------------------GAAGTTGTTCGTGGTGGATTCGC 	34
---------------------GAAGTTGTTCGTGGTGGATT 	485
---------------------GAAGTTGTTCGTGGTGGAT 	106
----------------------AAGTTGTTCGTGGTGGATTCGC 	2
----------------------AAGTTGTTCGTGGTGGATTCG 	605
----------------------AAGTTGTTCGTGGTGGATTC 	237
----------------------AAGTTGTTCGTGGTGGATT 	6
-----------------------AGTTGTTCGTGGTGGATTCGCTTT 	1
-----------------------AGTTGTTCGTGGTGGATTCGCTT 	5
-----------------------AGTTGTTCGTGGTGGATTCGCT 	16
-----------------------AGTTGTTCGTGGTGGATTCGC 	12
-----------------------AGTTGTTCGTGGTGGATTCG 	9
-----------------------AGTTGTTCGTGGTGGATTC 	18
-------------------------TTGTTCGTGGTGGATTCGCTTTACT 	1
-------------------------------------------------------CGAATCATTCACGGACAACACTT 	3
---------------------------------------------------------AATCATTCACGGACAACACTTT 	1546
---------------------------------------------------------AATCATTCACGGACAACACTT 	441
---------------------------------------------------------AATCATTCACGGACAACACTTTTT 	12
---------------------------------------------------------AATCATTCACGGACAACACTTTT 	167
---------------------------------------------------------AATCATTCACGGACAACACT 	10
---------------------------------------------------------AATCATTCACGGACAACAC 	15
----------------------------------------------------------ATCATTCACGGACAACACTTTTT 	2
----------------------------------------------------------ATCATTCACGGACAACACTT 	1
----------------------------------------------------------ATCATTCACGGACAACACTTTT 	4
----------------------------------------------------------ATCATTCACGGACAACACTTT 	11

Overlaps with: MNEST033092
Overlaps with miRBase pre-miRNAs: cgr-mir-382 rno-mir-3592 rno-mir-382 mmu-mir-382
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
9	Mus musculus	GSM539870	GAAGTTGTTCGTGGTGGATTCG	AATCATTCACGGACAACACTTTT	up	3	1

Secondary structure

CTTTTCTGTGGTACTTGAAGAGAAGTTGTTCGTGGTGGATTCGCTTTACTTGTGACGAATCATTCACGGACAACACTTTTTTCAGTACCAAATGCTAC
---------------------GAAGTTGTTCGTGGTGGATTCG 	27
---------------------GAAGTTGTTCGTGGTGGATTC 	5
---------------------GAAGTTGTTCGTGGTGGATT 	2
---------------------GAAGTTGTTCGTGGTGGAT 	1
----------------------AAGTTGTTCGTGGTGGATTCG 	2
----------------------AAGTTGTTCGTGGTGGATTC 	1
-----------------------AGTTGTTCGTGGTGGATTCGCT 	1
---------------------------------------------------------AATCATTCACGGACAACACTTT 	4
---------------------------------------------------------AATCATTCACGGACAACACTT 	1

Overlaps with: MNEST033092
Overlaps with miRBase pre-miRNAs: cgr-mir-382 rno-mir-3592 rno-mir-382 mmu-mir-382
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
10	Mus musculus	GSM527277-2110	GAAGTTGTTCGTGGTGGATTCG	AATCATTCACGGACAACACTTTT	up	3	1

Secondary structure

CTTTTCTGTGGTACTTGAAGAGAAGTTGTTCGTGGTGGATTCGCTTTACTTGTGACGAATCATTCACGGACAACACTTTTTTCAGTACCAAATGCTAC
--------------------AGAAGTTGTTCGTGGTGGATTCG 	7
--------------------AGAAGTTGTTCGTGGTGGATTC 	4
---------------------GAAGTTGTTCGTGGTGGAT 	92
---------------------GAAGTTGTTCGTGGTGGATT 	353
---------------------GAAGTTGTTCGTGGTGGATTCG 	6062
---------------------GAAGTTGTTCGTGGTGGATTC 	313
---------------------GAAGTTGTTCGTGGTGGATTCGC 	8
----------------------AAGTTGTTCGTGGTGGATT 	7
----------------------AAGTTGTTCGTGGTGGATTC 	21
----------------------AAGTTGTTCGTGGTGGATTCG 	413
----------------------AAGTTGTTCGTGGTGGATTCGC 	6
-----------------------AGTTGTTCGTGGTGGATTCGCTT 	1
-----------------------AGTTGTTCGTGGTGGATTCGC 	93
-----------------------AGTTGTTCGTGGTGGATTC 	23
-----------------------AGTTGTTCGTGGTGGATTCGCT 	59
-----------------------AGTTGTTCGTGGTGGATTCG 	75
------------------------GTTGTTCGTGGTGGATTCG 	15
---------------------------------------------------------AATCATTCACGGACAACAC 	6
---------------------------------------------------------AATCATTCACGGACAACACTTTT 	52
---------------------------------------------------------AATCATTCACGGACAACACTTTTT 	2
---------------------------------------------------------AATCATTCACGGACAACACTTT 	913
---------------------------------------------------------AATCATTCACGGACAACACT 	18
---------------------------------------------------------AATCATTCACGGACAACACTT 	111
----------------------------------------------------------ATCATTCACGGACAACACTTTTTT 	1
----------------------------------------------------------ATCATTCACGGACAACACTTTTT 	5
----------------------------------------------------------ATCATTCACGGACAACACTTTT 	24
----------------------------------------------------------ATCATTCACGGACAACACTTT 	24
----------------------------------------------------------ATCATTCACGGACAACACTT 	1
-----------------------------------------------------------TCATTCACGGACAACACTTTT 	1
-----------------------------------------------------------TCATTCACGGACAACACTTT 	2
------------------------------------------------------------CATTCACGGACAACACTTT 	1

Overlaps with: MNEST033092
Overlaps with miRBase pre-miRNAs: cgr-mir-382 rno-mir-3592 rno-mir-382 mmu-mir-382
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
11	Mus musculus	GSM539848	GAAGTTGTTCGTGGTGGATTCG	AATCATTCACGGACAACACTTTT	up	3	1

Secondary structure

CTTTTCTGTGGTACTTGAAGAGAAGTTGTTCGTGGTGGATTCGCTTTACTTGTGACGAATCATTCACGGACAACACTTTTTTCAGTACCAAATGCTAC
---------------------GAAGTTGTTCGTGGTGGATTCG 	5
---------------------GAAGTTGTTCGTGGTGGATTC 	1
---------------------GAAGTTGTTCGTGGTGGATT 	1

Overlaps with: MNEST033092
Overlaps with miRBase pre-miRNAs: cgr-mir-382 rno-mir-3592 rno-mir-382 mmu-mir-382
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
12	Mus musculus	GSM539872	GAAGTTGTTCGTGGTGGATTCG	AATCATTCACGGACAACACTTTT	up	3	1

Secondary structure

CTTTTCTGTGGTACTTGAAGAGAAGTTGTTCGTGGTGGATTCGCTTTACTTGTGACGAATCATTCACGGACAACACTTTTTTCAGTACCAAATGCTAC
---------------------GAAGTTGTTCGTGGTGGATTC 	3
---------------------GAAGTTGTTCGTGGTGGATTCGC 	1
---------------------GAAGTTGTTCGTGGTGGATTCG 	11
---------------------GAAGTTGTTCGTGGTGGATT 	2
----------------------AAGTTGTTCGTGGTGGATTCG 	2
---------------------------------------------------------AATCATTCACGGACAACACTT 	3
---------------------------------------------------------AATCATTCACGGACAACACTTT 	3

Overlaps with: MNEST033092
Overlaps with miRBase pre-miRNAs: cgr-mir-382 rno-mir-3592 rno-mir-382 mmu-mir-382
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
13	Mus musculus	GSM539871	GAAGTTGTTCGTGGTGGATTCG	AATCATTCACGGACAACACTTTT	up	3	1

Secondary structure

CTTTTCTGTGGTACTTGAAGAGAAGTTGTTCGTGGTGGATTCGCTTTACTTGTGACGAATCATTCACGGACAACACTTTTTTCAGTACCAAATGCTAC
---------------------GAAGTTGTTCGTGGTGGATTCG 	12
---------------------GAAGTTGTTCGTGGTGGATTC 	3
---------------------GAAGTTGTTCGTGGTGGATT 	1
----------------------AAGTTGTTCGTGGTGGATTCG 	1
---------------------------------------------------------AATCATTCACGGACAACACTTT 	3

Overlaps with: MNEST033092
Overlaps with miRBase pre-miRNAs: cgr-mir-382 rno-mir-3592 rno-mir-382 mmu-mir-382
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
14	Mus musculus	GSM539878	GAAGTTGTTCGTGGTGGATTCG	AATCATTCACGGACAACACTTTT	up	3	1

Secondary structure

CTTTTCTGTGGTACTTGAAGAGAAGTTGTTCGTGGTGGATTCGCTTTACTTGTGACGAATCATTCACGGACAACACTTTTTTCAGTACCAAATGCTAC
--TTTCTGTGGTACTTGAAGAGA 	1
---------------------GAAGTTGTTCGTGGTGGATTCGC 	1
---------------------GAAGTTGTTCGTGGTGGATTCG 	92
---------------------GAAGTTGTTCGTGGTGGATTC 	16
---------------------GAAGTTGTTCGTGGTGGATT 	14
---------------------GAAGTTGTTCGTGGTGGAT 	5
----------------------AAGTTGTTCGTGGTGGATTCG 	10
----------------------AAGTTGTTCGTGGTGGATT 	2
----------------------AAGTTGTTCGTGGTGGATTC 	1
---------------------------------------------------------AATCATTCACGGACAACACTTT 	10
---------------------------------------------------------AATCATTCACGGACAACACTT 	25
---------------------------------------------------------AATCATTCACGGACAACAC 	1
---------------------------------------------------------AATCATTCACGGACAACACT 	9

Overlaps with: MNEST033092
Overlaps with miRBase pre-miRNAs: cgr-mir-382 rno-mir-3592 rno-mir-382 mmu-mir-382
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
15	Mus musculus	GSM539873	GAAGTTGTTCGTGGTGGATTCG	AATCATTCACGGACAACACTTTT	up	3	1

Secondary structure

CTTTTCTGTGGTACTTGAAGAGAAGTTGTTCGTGGTGGATTCGCTTTACTTGTGACGAATCATTCACGGACAACACTTTTTTCAGTACCAAATGCTAC
---------------------GAAGTTGTTCGTGGTGGATTCG 	98
---------------------GAAGTTGTTCGTGGTGGATTC 	17
---------------------GAAGTTGTTCGTGGTGGATT 	13
---------------------GAAGTTGTTCGTGGTGGAT 	7
----------------------AAGTTGTTCGTGGTGGATTCG 	13
----------------------AAGTTGTTCGTGGTGGATTC 	6
-----------------------AGTTGTTCGTGGTGGATTCGCTT 	1
-----------------------AGTTGTTCGTGGTGGATTCGCT 	2
-----------------------AGTTGTTCGTGGTGGATTCG 	1
---------------------------------------------------------AATCATTCACGGACAACACTTT 	2
---------------------------------------------------------AATCATTCACGGACAACACTT 	14
---------------------------------------------------------AATCATTCACGGACAACACT 	1

Overlaps with: MNEST033092
Overlaps with miRBase pre-miRNAs: cgr-mir-382 rno-mir-3592 rno-mir-382 mmu-mir-382
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
16	Mus musculus	GSM539867	GAAGTTGTTCGTGGTGGATTCG	AATCATTCACGGACAACACTTTT	up	3	1

Secondary structure

CTTTTCTGTGGTACTTGAAGAGAAGTTGTTCGTGGTGGATTCGCTTTACTTGTGACGAATCATTCACGGACAACACTTTTTTCAGTACCAAATGCTAC
CTTTTCTGTGGTACTTGAAGA 	2
--TTTCTGTGGTACTTGAAGA 	1
--------------------AGAAGTTGTTCGTGGTGGATTCG 	3
--------------------AGAAGTTGTTCGTGGTGGATTC 	2
---------------------GAAGTTGTTCGTGGTGGATTCGCT 	6
---------------------GAAGTTGTTCGTGGTGGATTCGC 	16
---------------------GAAGTTGTTCGTGGTGGATTCG 	3341
---------------------GAAGTTGTTCGTGGTGGATTC 	387
---------------------GAAGTTGTTCGTGGTGGATT 	241
---------------------GAAGTTGTTCGTGGTGGAT 	45
---------------------GAAGTTGTTCGTGGTGGATTCGCTTT 	1
----------------------AAGTTGTTCGTGGTGGATTCGC 	2
----------------------AAGTTGTTCGTGGTGGATTCG 	294
----------------------AAGTTGTTCGTGGTGGATT 	11
----------------------AAGTTGTTCGTGGTGGATTCGCT 	1
----------------------AAGTTGTTCGTGGTGGATTC 	32
-----------------------AGTTGTTCGTGGTGGATTC 	3
-----------------------AGTTGTTCGTGGTGGATTCGCTT 	2
-----------------------AGTTGTTCGTGGTGGATTCGCT 	28
-----------------------AGTTGTTCGTGGTGGATTCGC 	11
-----------------------AGTTGTTCGTGGTGGATTCG 	12
---------------------------------------------------------AATCATTCACGGACAACACTTTTT 	6
---------------------------------------------------------AATCATTCACGGACAACACTTTT 	97
---------------------------------------------------------AATCATTCACGGACAACACTTT 	1094
---------------------------------------------------------AATCATTCACGGACAACACTT 	425
---------------------------------------------------------AATCATTCACGGACAACACT 	26
---------------------------------------------------------AATCATTCACGGACAACAC 	9
---------------------------------------------------------AATCATTCACGGACAACACTTTTTT 	2
----------------------------------------------------------ATCATTCACGGACAACACTTTTT 	6
----------------------------------------------------------ATCATTCACGGACAACACTTTT 	12
----------------------------------------------------------ATCATTCACGGACAACACTT 	2
----------------------------------------------------------ATCATTCACGGACAACACT 	2
----------------------------------------------------------ATCATTCACGGACAACACTTT 	26

Overlaps with: MNEST033092
Overlaps with miRBase pre-miRNAs: cgr-mir-382 rno-mir-3592 rno-mir-382 mmu-mir-382
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
17	Mus musculus	GSM539854	GAAGTTGTTCGTGGTGGATTCG	AATCATTCACGGACAACACTTTT	up	3	1

Secondary structure

CTTTTCTGTGGTACTTGAAGAGAAGTTGTTCGTGGTGGATTCGCTTTACTTGTGACGAATCATTCACGGACAACACTTTTTTCAGTACCAAATGCTAC
--------------------AGAAGTTGTTCGTGGTGGATTC 	1
--------------------AGAAGTTGTTCGTGGTGGATTCG 	2
---------------------GAAGTTGTTCGTGGTGGATTCGC 	4
---------------------GAAGTTGTTCGTGGTGGATTCG 	326
---------------------GAAGTTGTTCGTGGTGGATTC 	23
---------------------GAAGTTGTTCGTGGTGGATT 	11
---------------------GAAGTTGTTCGTGGTGGAT 	13
----------------------AAGTTGTTCGTGGTGGATTCGCT 	1
----------------------AAGTTGTTCGTGGTGGATTCG 	20
----------------------AAGTTGTTCGTGGTGGATTC 	11
-----------------------AGTTGTTCGTGGTGGATTCG 	1
-----------------------AGTTGTTCGTGGTGGATTCGCT 	3
-----------------------AGTTGTTCGTGGTGGATTCGC 	1
---------------------------------------------------------AATCATTCACGGACAACACTTT 	14
---------------------------------------------------------AATCATTCACGGACAACACTT 	32
---------------------------------------------------------AATCATTCACGGACAACACT 	1

Overlaps with: MNEST033092
Overlaps with miRBase pre-miRNAs: cgr-mir-382 rno-mir-3592 rno-mir-382 mmu-mir-382
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
18	Mus musculus	GSM527279-2112	GAAGTTGTTCGTGGTGGATTCG	AATCATTCACGGACAACACTTTT	up	3	1

Secondary structure

CTTTTCTGTGGTACTTGAAGAGAAGTTGTTCGTGGTGGATTCGCTTTACTTGTGACGAATCATTCACGGACAACACTTTTTTCAGTACCAAATGCTAC
--------------------AGAAGTTGTTCGTGGTGGATTCG 	2
--------------------AGAAGTTGTTCGTGGTGGAT 	1
--------------------AGAAGTTGTTCGTGGTGGATT 	2
---------------------GAAGTTGTTCGTGGTGGATTCG 	4426
---------------------GAAGTTGTTCGTGGTGGATTC 	228
---------------------GAAGTTGTTCGTGGTGGATT 	220
---------------------GAAGTTGTTCGTGGTGGATTCGCT 	1
---------------------GAAGTTGTTCGTGGTGGAT 	41
---------------------GAAGTTGTTCGTGGTGGATTCGC 	9
----------------------AAGTTGTTCGTGGTGGATTC 	11
----------------------AAGTTGTTCGTGGTGGATTCG 	362
----------------------AAGTTGTTCGTGGTGGATT 	11
----------------------AAGTTGTTCGTGGTGGATTCGC 	3
-----------------------AGTTGTTCGTGGTGGATTCGCTT 	2
-----------------------AGTTGTTCGTGGTGGATTCGCT 	74
-----------------------AGTTGTTCGTGGTGGATTCG 	85
-----------------------AGTTGTTCGTGGTGGATTCGCTTT 	2
-----------------------AGTTGTTCGTGGTGGATTC 	21
-----------------------AGTTGTTCGTGGTGGATTCGC 	104
------------------------GTTGTTCGTGGTGGATTCG 	12
-------------------------TTGTTCGTGGTGGATTCGC 	1
---------------------------------------------------------AATCATTCACGGACAACAC 	5
---------------------------------------------------------AATCATTCACGGACAACACTTTT 	41
---------------------------------------------------------AATCATTCACGGACAACACTT 	67
---------------------------------------------------------AATCATTCACGGACAACACTTTTT 	1
---------------------------------------------------------AATCATTCACGGACAACACTTT 	833
---------------------------------------------------------AATCATTCACGGACAACACT 	23
----------------------------------------------------------ATCATTCACGGACAACACTTT 	33
----------------------------------------------------------ATCATTCACGGACAACACTT 	3
----------------------------------------------------------ATCATTCACGGACAACACTTTTT 	5
----------------------------------------------------------ATCATTCACGGACAACACTTTT 	18
-----------------------------------------------------------TCATTCACGGACAACACTTT 	3

Overlaps with: MNEST033092
Overlaps with miRBase pre-miRNAs: cgr-mir-382 rno-mir-3592 rno-mir-382 mmu-mir-382
HuntMi prediction: true miRNA