miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: deep sequencing predictions



Please select library, species and/or miRNA sequence.


selected mature miRNA sequence: GACCCGTAGATCCGAACTTGTG

selected species: Acyrthosiphon pisum



1 records found  

#specieslibrarymiRNAmiRNA*armmismatchesbulges
1 Acyrthosiphon pisum GSM502519_unique_quant GACCCGTAGATCCGAACTTGTG CAAGTTCGTTTCTAGAGGATACA up 6 1


Secondary structure

AATGAGAAAAATGTGAAAACTGAGTTGCTACGACCCGTAGATCCGAACTTGTGTCGCAAAGTTTAGTATCACAAGTTCGTTTCTAGAGGATACAGCCACTCAGTGCACTCATCTATTATAAA
-------------------------------GACCCGTAGATCCGAACTTGTGT 	2
-------------------------------GACCCGTAGATCCGAACTTGTG 	7
-------------------------------GACCCGTAGATCCGAACTTGT 	5

Overlaps with: MNEST035062
Overlaps with miRBase pre-miRNAs: api-mir-100
HuntMi prediction: true miRNA