miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: deep sequencing predictions



Please select library, species and/or miRNA sequence.


selected mature miRNA sequence: GATATAACCAAAGCCTGACTAT

selected species: Mus musculus



2 records found  

#specieslibrarymiRNAmiRNA*armmismatchesbulges
1 Mus musculus GSM527277-2110 GATATAACCAAAGCCTGACTAT AGTCAGGCTTCTGGCTATATTCCA down 3 2


Secondary structure

GGTCTGCAGGGAAGGATTTGATCAGTCAGGCTTCTGGCTATATTCCAGGACTTACCTGGTCCTGGATATAACCAAAGCCTGACTATATGGTGCTAAAGACAAGGAA
-------------------------TCAGGCTTCTGGCTATATTCCA 	1
----------------------------------------------------------------GATATAACCAAAGCCTGACTATAT 	1
----------------------------------------------------------------GATATAACCAAAGCCTGACTAT 	8

Overlaps with: MNEST032021
Overlaps with miRBase pre-miRNAs: mmu-mir-344e
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
2 Mus musculus GSM527279-2112 GATATAACCAAAGCCTGACTAT AGTCAGGCTTCTGGCTATATTCCA down 3 2


Secondary structure

GGTCTGCAGGGAAGGATTTGATCAGTCAGGCTTCTGGCTATATTCCAGGACTTACCTGGTCCTGGATATAACCAAAGCCTGACTATATGGTGCTAAAGACAAGGAA
-------------------------TCAGGCTTCTGGCTATATTCCAG 	1
----------------------------------------------------------------GATATAACCAAAGCCTGACTAT 	9

Overlaps with: MNEST032021
Overlaps with miRBase pre-miRNAs: mmu-mir-344e
HuntMi prediction: true miRNA