miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: deep sequencing predictions



Please select library, species and/or miRNA sequence.


selected mature miRNA sequence: GTGAGCAAAGTTTCAGGTGTGC

selected species: Acyrthosiphon pisum



1 records found  

#specieslibrarymiRNAmiRNA*armmismatchesbulges
1 Acyrthosiphon pisum GSM502519_unique_quant GTGAGCAAAGTTTCAGGTGTGC GGGCCTGACTCATTGCTCAACCT down 5 1


Secondary structure

ACGATTATTTCACAATGTTGGCGGGCCTGACTCATTGCTCAACCTGTGTTATTGATACGTTATTAGGTGAGCAAAGTTTCAGGTGTGCCAACGTTGCGAACAACACA
-----------------------------------------------------------------GGTGAGCAAAGTTTCAGGTGT 	1
------------------------------------------------------------------GTGAGCAAAGTTTCAGGTGTGCC 	2
------------------------------------------------------------------GTGAGCAAAGTTTCAGGTGTGC 	439
------------------------------------------------------------------GTGAGCAAAGTTTCAGGTGTG 	281
------------------------------------------------------------------GTGAGCAAAGTTTCAGGTGT 	25
------------------------------------------------------------------GTGAGCAAAGTTTCAGGTG 	6

Overlaps with: MNEST035056
Overlaps with miRBase pre-miRNAs: api-mir-87a
HuntMi prediction: true miRNA