miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: deep sequencing predictions



Please select library, species and/or miRNA sequence.


selected mature miRNA sequence: GTGGTTCTGCGGGTGCCAAAAC

selected species: Drosophila melanogaster



1 records found  

#specieslibrarymiRNAmiRNA*armmismatchesbulges
1 Drosophila melanogaster GSM286607-9796 GTGGTTCTGCGGGTGCCAAAAC CTTGGCACTGGGAGAATTCACAG down 4 1


Secondary structure

CTGACTTTGAGTCTTGGCACTGGGAGAATTCACAGTTGACTTTATTATTCTGTGGTTCTGCGGGTGCCAAAACTTAAAAACC
------------CTTGGCACTGGGAGAATTCA 	3
------------CTTGGCACTGGGAGAATTCAC 	5
------------CTTGGCACTGGGAGAATTCACAG 	359
------------CTTGGCACTGGGAGAATTCACAGT 	1
------------CTTGGCACTGGGAGAATTCACA 	53
-------------TTGGCACTGGGAGAATTCACAG 	1
--------------------------------------------------TGTGGTTCTGCGGGTGCCAAAA 	3
--------------------------------------------------TGTGGTTCTGCGGGTGCCAAAAC 	3
---------------------------------------------------GTGGTTCTGCGGGTGCCAAA 	8
---------------------------------------------------GTGGTTCTGCGGGTGCCAAAAC 	462
---------------------------------------------------GTGGTTCTGCGGGTGCCAAAA 	43
----------------------------------------------------TGGTTCTGCGGGTGCCAAAA 	1
----------------------------------------------------TGGTTCTGCGGGTGCCAAAAC 	5

Overlaps with: MNEST036407 MNEST036408
Overlaps with miRBase pre-miRNAs: dme-mir-263b
HuntMi prediction: true miRNA