miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: deep sequencing predictions



Please select library, species and/or miRNA sequence.


selected mature miRNA sequence: GTTCTGTATAAGTTGAGCTG

selected species: Ciona intestinalis



1 records found  

#specieslibrarymiRNAmiRNA*armmismatchesbulges
1 Ciona intestinalis GSM343286 GTTCTGTATAAGTTGAGCTG GTTCAACTCCATACAGAATTG down 1 1


Secondary structure

ATAAATTCTTGCTTTTGAGATAGTTCAACTCCATACAGAATTGTGGTCTCAGTTCTGTATAAGTTGAGCTGAATCAAAAGCAGAACAATC
--------------------TAGTTCAACTCCATACAGAA 	1
---------------------------------------------------GTTCTGTATAAGTTGAGCTG 	11

Overlaps with: MNEST025126 MNEST025127
Overlaps with miRBase pre-miRNAs: cin-mir-4082 cin-mir-4081
HuntMi prediction: true miRNA