miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: deep sequencing predictions



Please select library, species and/or miRNA sequence.


selected mature miRNA sequence: TAAAGCTAGATTACCAAAGCAT

selected species: Drosophila melanogaster



23 records found  

#specieslibrarymiRNAmiRNA*armmismatchesbulges
1 Drosophila melanogaster GSM360257-14325 TAAAGCTAGATTACCAAAGCAT GCTTTGGCGCTTTAGCTGTATG down 5 0


Secondary structure

TGACTTGCCATTGCTTTGGCGCTTTAGCTGTATGATAGATTTAAACTACTTCATAAAGCTAGATTACCAAAGCATTGGCTTCTG
------------GCTTTGGCGCTTTAGCTGTATG 	1
----------------------------------------------------ATAAAGCTAGATTACCAAAGCAT 	4
-----------------------------------------------------TAAAGCTAGATTACCAAAGCAT 	44


Overlaps with: MNEST036375 MNEST036376
Overlaps with miRBase pre-miRNAs: dme-mir-79
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
2 Drosophila melanogaster GSM399107-16288 TAAAGCTAGATTACCAAAGCAT GCTTTGGCGCTTTAGCTGTATG down 5 0


Secondary structure

TGACTTGCCATTGCTTTGGCGCTTTAGCTGTATGATAGATTTAAACTACTTCATAAAGCTAGATTACCAAAGCATTGGCTTCTG
------------GCTTTGGCGCTTTAGCTGTA 	1
------------GCTTTGGCGCTTTAGCTGTATGA 	10
------------GCTTTGGCGCTTTAGCTGTATG 	4
-------------CTTTGGCGCTTTAGCTGTAT 	1
-------------CTTTGGCGCTTTAGCTGTATGA 	1
----------------------------------------------------ATAAAGCTAGATTACCAAAG 	2
----------------------------------------------------ATAAAGCTAGATTACCAAA 	2
----------------------------------------------------ATAAAGCTAGATTACCAAAGC 	2
----------------------------------------------------ATAAAGCTAGATTACCAAAGCATT 	1
----------------------------------------------------ATAAAGCTAGATTACCAAAGCAT 	73
----------------------------------------------------ATAAAGCTAGATTACCAAAGCA 	5
-----------------------------------------------------TAAAGCTAGATTACCAAAGC 	6
-----------------------------------------------------TAAAGCTAGATTACCAAAGCAT 	854
-----------------------------------------------------TAAAGCTAGATTACCAAAGCA 	26
-----------------------------------------------------TAAAGCTAGATTACCAAAGCATT 	1
------------------------------------------------------AAAGCTAGATTACCAAAGCATT 	2
------------------------------------------------------AAAGCTAGATTACCAAAGCAT 	8
-------------------------------------------------------AAGCTAGATTACCAAAGCA 	1
-------------------------------------------------------AAGCTAGATTACCAAAGCAT 	3
--------------------------------------------------------AGCTAGATTACCAAAGCAT 	1


Overlaps with: MNEST036375 MNEST036376
Overlaps with miRBase pre-miRNAs: dme-mir-79
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
3 Drosophila melanogaster GSM399106-16287 TAAAGCTAGATTACCAAAGCAT GCTTTGGCGCTTTAGCTGTATG down 5 0


Secondary structure

TGACTTGCCATTGCTTTGGCGCTTTAGCTGTATGATAGATTTAAACTACTTCATAAAGCTAGATTACCAAAGCATTGGCTTCTG
------------GCTTTGGCGCTTTAGCTGTATGA 	46
------------GCTTTGGCGCTTTAGCTGTAT 	2
------------GCTTTGGCGCTTTAGCTGTATG 	4
------------GCTTTGGCGCTTTAGCTGTATGATA 	1
-------------CTTTGGCGCTTTAGCTGTATGA 	2
--------------TTTGGCGCTTTAGCTGTATGA 	3
---------------TTGGCGCTTTAGCTGTATGAT 	1
---------------TTGGCGCTTTAGCTGTATGATA 	1
----------------------------------ATAGATTTAAACTACTTCA 	1
----------------------------------------------------ATAAAGCTAGATTACCAAA 	1
----------------------------------------------------ATAAAGCTAGATTACCAAAGCATT 	1
----------------------------------------------------ATAAAGCTAGATTACCAAAGCA 	6
----------------------------------------------------ATAAAGCTAGATTACCAAAG 	1
----------------------------------------------------ATAAAGCTAGATTACCAAAGC 	5
----------------------------------------------------ATAAAGCTAGATTACCAAAGCAT 	137
-----------------------------------------------------TAAAGCTAGATTACCAAAGC 	2
-----------------------------------------------------TAAAGCTAGATTACCAAAGCAT 	1210
-----------------------------------------------------TAAAGCTAGATTACCAAAGCA 	24
-----------------------------------------------------TAAAGCTAGATTACCAAAGCATT 	4
------------------------------------------------------AAAGCTAGATTACCAAAGCATT 	5
------------------------------------------------------AAAGCTAGATTACCAAAGCAT 	9
-------------------------------------------------------AAGCTAGATTACCAAAGCAT 	1
--------------------------------------------------------AGCTAGATTACCAAAGCAT 	1


Overlaps with: MNEST036375 MNEST036376
Overlaps with miRBase pre-miRNAs: dme-mir-79
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
4 Drosophila melanogaster GSM466487_wt_total TAAAGCTAGATTACCAAAGCAT GCTTTGGCGCTTTAGCTGTATG down 5 0


Secondary structure

TGACTTGCCATTGCTTTGGCGCTTTAGCTGTATGATAGATTTAAACTACTTCATAAAGCTAGATTACCAAAGCATTGGCTTCTG
------------GCTTTGGCGCTTTAGCTGTATG 	7
------------GCTTTGGCGCTTTAGCTGTATGA 	25
------------GCTTTGGCGCTTTAGCTGTAT 	2
-------------CTTTGGCGCTTTAGCTGTATGA 	3
-------------CTTTGGCGCTTTAGCTGTATG 	2
--------------TTTGGCGCTTTAGCTGTATG 	2
----------------------------------ATAGATTTAAACTACTTCA 	2
--------------------------------------------------TCATAAAGCTAGATTACCA 	1
--------------------------------------------------TCATAAAGCTAGATTACCAAAGCAT 	1
---------------------------------------------------CATAAAGCTAGATTACCAAAGCAT 	2
----------------------------------------------------ATAAAGCTAGATTACCAAAGC 	41
----------------------------------------------------ATAAAGCTAGATTACCAAAGCAT 	1350
----------------------------------------------------ATAAAGCTAGATTACCAAA 	1
----------------------------------------------------ATAAAGCTAGATTACCAAAGCATT 	2
----------------------------------------------------ATAAAGCTAGATTACCAAAGCA 	150
----------------------------------------------------ATAAAGCTAGATTACCAAAG 	7
-----------------------------------------------------TAAAGCTAGATTACCAAAGC 	28
-----------------------------------------------------TAAAGCTAGATTACCAAAGCATT 	6
-----------------------------------------------------TAAAGCTAGATTACCAAAG 	7
-----------------------------------------------------TAAAGCTAGATTACCAAAGCAT 	2276
-----------------------------------------------------TAAAGCTAGATTACCAAAGCA 	162
------------------------------------------------------AAAGCTAGATTACCAAAGC 	2
------------------------------------------------------AAAGCTAGATTACCAAAGCATT 	5
------------------------------------------------------AAAGCTAGATTACCAAAGCAT 	52
------------------------------------------------------AAAGCTAGATTACCAAAGCA 	7
-------------------------------------------------------AAGCTAGATTACCAAAGCAT 	4


Overlaps with: MNEST036375 MNEST036376
Overlaps with miRBase pre-miRNAs: dme-mir-79
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
5 Drosophila melanogaster GSM399105-16286 TAAAGCTAGATTACCAAAGCAT GCTTTGGCGCTTTAGCTGTATG down 5 0


Secondary structure

TGACTTGCCATTGCTTTGGCGCTTTAGCTGTATGATAGATTTAAACTACTTCATAAAGCTAGATTACCAAAGCATTGGCTTCTG
------------GCTTTGGCGCTTTAGCTGTA 	5
------------GCTTTGGCGCTTTAGCTGTATGA 	36
------------GCTTTGGCGCTTTAGCTGTATG 	8
------------GCTTTGGCGCTTTAGCTGTAT 	1
-------------CTTTGGCGCTTTAGCTGTATGA 	4
---------------TTGGCGCTTTAGCTGTATGA 	3
----------------------------------------------------ATAAAGCTAGATTACCAAAGCAT 	149
----------------------------------------------------ATAAAGCTAGATTACCAAAGCA 	9
-----------------------------------------------------TAAAGCTAGATTACCAAAGCAT 	1310
-----------------------------------------------------TAAAGCTAGATTACCAAAGCA 	10
-----------------------------------------------------TAAAGCTAGATTACCAAAGCATT 	3
------------------------------------------------------AAAGCTAGATTACCAAAGCATT 	4
------------------------------------------------------AAAGCTAGATTACCAAAGCA 	1
------------------------------------------------------AAAGCTAGATTACCAAAGCAT 	18
-------------------------------------------------------AAGCTAGATTACCAAAGCAT 	2
--------------------------------------------------------AGCTAGATTACCAAAGCAT 	1


Overlaps with: MNEST036375 MNEST036376
Overlaps with miRBase pre-miRNAs: dme-mir-79
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
6 Drosophila melanogaster GSM360262-14327 TAAAGCTAGATTACCAAAGCAT GCTTTGGCGCTTTAGCTGTATG down 5 0


Secondary structure

TGACTTGCCATTGCTTTGGCGCTTTAGCTGTATGATAGATTTAAACTACTTCATAAAGCTAGATTACCAAAGCATTGGCTTCTG
------------GCTTTGGCGCTTTAGCTGTA 	2
------------GCTTTGGCGCTTTAGCTGTATGA 	52
------------GCTTTGGCGCTTTAGCTGTATG 	30
--------------------------------------------------TCATAAAGCTAGATTACCAAAG 	1
----------------------------------------------------ATAAAGCTAGATTACCAAAGCAT 	234
----------------------------------------------------ATAAAGCTAGATTACCAAAGCA 	16
-----------------------------------------------------TAAAGCTAGATTACCAAAGC 	2
-----------------------------------------------------TAAAGCTAGATTACCAAAGCAT 	2476
-----------------------------------------------------TAAAGCTAGATTACCAAAGCA 	24
-----------------------------------------------------TAAAGCTAGATTACCAAAG 	1
-----------------------------------------------------TAAAGCTAGATTACCAAAGCATT 	5
------------------------------------------------------AAAGCTAGATTACCAAAGCATT 	9
------------------------------------------------------AAAGCTAGATTACCAAAGCAT 	14
-------------------------------------------------------AAGCTAGATTACCAAAGCAT 	3
--------------------------------------------------------AGCTAGATTACCAAAGCAT 	2


Overlaps with: MNEST036375 MNEST036376
Overlaps with miRBase pre-miRNAs: dme-mir-79
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
7 Drosophila melanogaster GSM385822-16273 TAAAGCTAGATTACCAAAGCAT GCTTTGGCGCTTTAGCTGTATG down 5 0


Secondary structure

TGACTTGCCATTGCTTTGGCGCTTTAGCTGTATGATAGATTTAAACTACTTCATAAAGCTAGATTACCAAAGCATTGGCTTCTG
-----------TGCTTTGGCGCTTTAGCTGTAT 	1
------------GCTTTGGCGCTTTAGCTGTATGAT 	1
------------GCTTTGGCGCTTTAGCTGTATG 	4
------------GCTTTGGCGCTTTAGCTGTA 	6
------------GCTTTGGCGCTTTAGCTGTATGA 	23
------------GCTTTGGCGCTTTAGCTGT 	1
------------GCTTTGGCGCTTTAGCTGTAT 	3
-------------CTTTGGCGCTTTAGCTGTAT 	1
-------------CTTTGGCGCTTTAGCTGTATGA 	5
--------------TTTGGCGCTTTAGCTGTATGA 	5
----------------------------------ATAGATTTAAACTACTTCA 	2
-------------------------------------------------TTCATAAAGCTAGATTACCAAAGCAT 	1
--------------------------------------------------TCATAAAGCTAGATTACCAAAGCA 	1
--------------------------------------------------TCATAAAGCTAGATTACCAAAGCAT 	4
---------------------------------------------------CATAAAGCTAGATTACCAAAG 	1
---------------------------------------------------CATAAAGCTAGATTACCAAAGCAT 	48
---------------------------------------------------CATAAAGCTAGATTACCAAAGCA 	3
----------------------------------------------------ATAAAGCTAGATTACCAAAGC 	129
----------------------------------------------------ATAAAGCTAGATTACCAAAGCAT 	15246
----------------------------------------------------ATAAAGCTAGATTACCAAA 	35
----------------------------------------------------ATAAAGCTAGATTACCAAAGCATT 	42
----------------------------------------------------ATAAAGCTAGATTACCAAAGCA 	605
----------------------------------------------------ATAAAGCTAGATTACCAAAGCATTG 	1
----------------------------------------------------ATAAAGCTAGATTACCAAAG 	74
-----------------------------------------------------TAAAGCTAGATTACCAAAGCATTGG 	1
-----------------------------------------------------TAAAGCTAGATTACCAAAGC 	161
-----------------------------------------------------TAAAGCTAGATTACCAAAGCATT 	281
-----------------------------------------------------TAAAGCTAGATTACCAAAGCATTG 	7
-----------------------------------------------------TAAAGCTAGATTACCAAAG 	88
-----------------------------------------------------TAAAGCTAGATTACCAAAGCAT 	38889
-----------------------------------------------------TAAAGCTAGATTACCAAAGCA 	694
------------------------------------------------------AAAGCTAGATTACCAAAGC 	13
------------------------------------------------------AAAGCTAGATTACCAAAGCATT 	2106
------------------------------------------------------AAAGCTAGATTACCAAAGCAT 	2147
------------------------------------------------------AAAGCTAGATTACCAAAGCA 	106
------------------------------------------------------AAAGCTAGATTACCAAAGCATTG 	3
-------------------------------------------------------AAGCTAGATTACCAAAGCATT 	4
-------------------------------------------------------AAGCTAGATTACCAAAGCA 	1
-------------------------------------------------------AAGCTAGATTACCAAAGCAT 	28
--------------------------------------------------------AGCTAGATTACCAAAGCAT 	11


Overlaps with: MNEST036375 MNEST036376
Overlaps with miRBase pre-miRNAs: dme-mir-79
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
8 Drosophila melanogaster GSM360256-14324 TAAAGCTAGATTACCAAAGCAT GCTTTGGCGCTTTAGCTGTATG down 5 0


Secondary structure

TGACTTGCCATTGCTTTGGCGCTTTAGCTGTATGATAGATTTAAACTACTTCATAAAGCTAGATTACCAAAGCATTGGCTTCTG
------------GCTTTGGCGCTTTAGCTGTATGA 	3
----------------------------------------------------ATAAAGCTAGATTACCAAAGCAT 	4
-----------------------------------------------------TAAAGCTAGATTACCAAAGCAT 	68
-----------------------------------------------------TAAAGCTAGATTACCAAAGCATT 	1
------------------------------------------------------AAAGCTAGATTACCAAAGCAT 	2
--------------------------------------------------------AGCTAGATTACCAAAGCAT 	2


Overlaps with: MNEST036375 MNEST036376
Overlaps with miRBase pre-miRNAs: dme-mir-79
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
9 Drosophila melanogaster GSM371638-15389 TAAAGCTAGATTACCAAAGCAT GCTTTGGCGCTTTAGCTGTATG down 5 0


Secondary structure

TGACTTGCCATTGCTTTGGCGCTTTAGCTGTATGATAGATTTAAACTACTTCATAAAGCTAGATTACCAAAGCATTGGCTTCTG
------------GCTTTGGCGCTTTAGCTGTATG 	147
------------GCTTTGGCGCTTTAGCTGTA 	7
------------GCTTTGGCGCTTTAGCTGTATGA 	51
------------GCTTTGGCGCTTTAGCTGT 	1
------------GCTTTGGCGCTTTAGCTGTAT 	2
-------------CTTTGGCGCTTTAGCTGTATGA 	1
-------------CTTTGGCGCTTTAGCTGTATG 	1
--------------TTTGGCGCTTTAGCTGTATGA 	1
---------------TTGGCGCTTTAGCTGTATGAT 	1
----------------------------------------------------ATAAAGCTAGATTACCAAAGC 	1
----------------------------------------------------ATAAAGCTAGATTACCAAAGCAT 	670
----------------------------------------------------ATAAAGCTAGATTACCAAAGCA 	6
----------------------------------------------------ATAAAGCTAGATTACCAAAG 	1
-----------------------------------------------------TAAAGCTAGATTACCAAAGC 	10
-----------------------------------------------------TAAAGCTAGATTACCAAAGCATT 	4
-----------------------------------------------------TAAAGCTAGATTACCAAAG 	3
-----------------------------------------------------TAAAGCTAGATTACCAAAGCAT 	2670
-----------------------------------------------------TAAAGCTAGATTACCAAAGCA 	60
------------------------------------------------------AAAGCTAGATTACCAAAGC 	1
------------------------------------------------------AAAGCTAGATTACCAAAGCATT 	2
------------------------------------------------------AAAGCTAGATTACCAAAGCAT 	73
-------------------------------------------------------AAGCTAGATTACCAAAGCATT 	3
-------------------------------------------------------AAGCTAGATTACCAAAGCAT 	3
--------------------------------------------------------AGCTAGATTACCAAAGCAT 	2


Overlaps with: MNEST036375 MNEST036376
Overlaps with miRBase pre-miRNAs: dme-mir-79
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
10 Drosophila melanogaster GSM286605-9793 TAAAGCTAGATTACCAAAGCAT GCTTTGGCGCTTTAGCTGTATG down 5 0


Secondary structure

TGACTTGCCATTGCTTTGGCGCTTTAGCTGTATGATAGATTTAAACTACTTCATAAAGCTAGATTACCAAAGCATTGGCTTCTG
------------GCTTTGGCGCTTTAGCTGTA 	5
------------GCTTTGGCGCTTTAGCTGTATGA 	91
------------GCTTTGGCGCTTTAGCTGTAT 	2
------------GCTTTGGCGCTTTAGCTGTATG 	37
---------------TTGGCGCTTTAGCTGTATGATA 	1
----------------------------------------------------ATAAAGCTAGATTACCAAAGCA 	34
----------------------------------------------------ATAAAGCTAGATTACCAAAG 	1
----------------------------------------------------ATAAAGCTAGATTACCAAAGC 	4
----------------------------------------------------ATAAAGCTAGATTACCAAAGCAT 	511
-----------------------------------------------------TAAAGCTAGATTACCAAAG 	3
-----------------------------------------------------TAAAGCTAGATTACCAAAGC 	10
-----------------------------------------------------TAAAGCTAGATTACCAAAGCAT 	4056
-----------------------------------------------------TAAAGCTAGATTACCAAAGCA 	28
-----------------------------------------------------TAAAGCTAGATTACCAAAGCATT 	11
------------------------------------------------------AAAGCTAGATTACCAAAGCATT 	24
------------------------------------------------------AAAGCTAGATTACCAAAGCAT 	18
-------------------------------------------------------AAGCTAGATTACCAAAGCAT 	8
-------------------------------------------------------AAGCTAGATTACCAAAGCATT 	2


Overlaps with: MNEST036375 MNEST036376
Overlaps with miRBase pre-miRNAs: dme-mir-79
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
11 Drosophila melanogaster GSM343833-15151 TAAAGCTAGATTACCAAAGCAT GCTTTGGCGCTTTAGCTGTATG down 5 0


Secondary structure

TGACTTGCCATTGCTTTGGCGCTTTAGCTGTATGATAGATTTAAACTACTTCATAAAGCTAGATTACCAAAGCATTGGCTTCTG
------------GCTTTGGCGCTTTAGCTGTA 	13
------------GCTTTGGCGCTTTAGCTGTATGA 	47
------------GCTTTGGCGCTTTAGCTGT 	3
------------GCTTTGGCGCTTTAGCTGTAT 	2
------------GCTTTGGCGCTTTAGCTGTATG 	91
-------------CTTTGGCGCTTTAGCTGTATGA 	4
----------------------------------------------------ATAAAGCTAGATTACCAAAGCATT 	1
----------------------------------------------------ATAAAGCTAGATTACCAAAGCA 	6
----------------------------------------------------ATAAAGCTAGATTACCAAAG 	3
----------------------------------------------------ATAAAGCTAGATTACCAAAGC 	1
----------------------------------------------------ATAAAGCTAGATTACCAAAGCAT 	176
-----------------------------------------------------TAAAGCTAGATTACCAAAG 	2
-----------------------------------------------------TAAAGCTAGATTACCAAAGC 	7
-----------------------------------------------------TAAAGCTAGATTACCAAAGCAT 	873
-----------------------------------------------------TAAAGCTAGATTACCAAAGCA 	18
-----------------------------------------------------TAAAGCTAGATTACCAAAGCATT 	5
------------------------------------------------------AAAGCTAGATTACCAAAGCATT 	2
------------------------------------------------------AAAGCTAGATTACCAAAGCAT 	7
-------------------------------------------------------AAGCTAGATTACCAAAGCAT 	1


Overlaps with: MNEST036375 MNEST036376
Overlaps with miRBase pre-miRNAs: dme-mir-79
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
12 Drosophila melanogaster GSM343832-15149 TAAAGCTAGATTACCAAAGCAT GCTTTGGCGCTTTAGCTGTATG down 5 0


Secondary structure

TGACTTGCCATTGCTTTGGCGCTTTAGCTGTATGATAGATTTAAACTACTTCATAAAGCTAGATTACCAAAGCATTGGCTTCTG
------------GCTTTGGCGCTTTAGCTGTA 	8
------------GCTTTGGCGCTTTAGCTGTATGA 	25
------------GCTTTGGCGCTTTAGCTGTAT 	2
------------GCTTTGGCGCTTTAGCTGTATG 	112
----------------------------------------------------ATAAAGCTAGATTACCAAAGCA 	1
----------------------------------------------------ATAAAGCTAGATTACCAAAGC 	1
----------------------------------------------------ATAAAGCTAGATTACCAAAGCAT 	61
-----------------------------------------------------TAAAGCTAGATTACCAAAG 	3
-----------------------------------------------------TAAAGCTAGATTACCAAAGC 	6
-----------------------------------------------------TAAAGCTAGATTACCAAAGCAT 	346
-----------------------------------------------------TAAAGCTAGATTACCAAAGCA 	14
-----------------------------------------------------TAAAGCTAGATTACCAAAGCATT 	1
------------------------------------------------------AAAGCTAGATTACCAAAGCATT 	1
------------------------------------------------------AAAGCTAGATTACCAAAGCAT 	5
--------------------------------------------------------AGCTAGATTACCAAAGCAT 	1


Overlaps with: MNEST036375 MNEST036376
Overlaps with miRBase pre-miRNAs: dme-mir-79
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
13 Drosophila melanogaster GSM399100-5263 TAAAGCTAGATTACCAAAGCAT GCTTTGGCGCTTTAGCTGTATG down 5 0


Secondary structure

TGACTTGCCATTGCTTTGGCGCTTTAGCTGTATGATAGATTTAAACTACTTCATAAAGCTAGATTACCAAAGCATTGGCTTCTG
------------GCTTTGGCGCTTTAGCTGTA 	6
------------GCTTTGGCGCTTTAGCTGTATGA 	68
------------GCTTTGGCGCTTTAGCTGT 	4
------------GCTTTGGCGCTTTAGCTGTAT 	7
------------GCTTTGGCGCTTTAGCTGTATG 	352
-------------CTTTGGCGCTTTAGCTGTATG 	2
-------------CTTTGGCGCTTTAGCTGTATGA 	4
--------------TTTGGCGCTTTAGCTGTATG 	1
--------------TTTGGCGCTTTAGCTGTATGA 	2
----------------------------------------------------ATAAAGCTAGATTACCAAAGCATT 	3
----------------------------------------------------ATAAAGCTAGATTACCAAAGCA 	30
----------------------------------------------------ATAAAGCTAGATTACCAAAG 	10
----------------------------------------------------ATAAAGCTAGATTACCAAAGC 	20
----------------------------------------------------ATAAAGCTAGATTACCAAAGCAT 	820
-----------------------------------------------------TAAAGCTAGATTACCAAAG 	17
-----------------------------------------------------TAAAGCTAGATTACCAAAGC 	86
-----------------------------------------------------TAAAGCTAGATTACCAAAGCAT 	1764
-----------------------------------------------------TAAAGCTAGATTACCAAAGCA 	63
-----------------------------------------------------TAAAGCTAGATTACCAAAGCATT 	7
------------------------------------------------------AAAGCTAGATTACCAAAGCATT 	9
------------------------------------------------------AAAGCTAGATTACCAAAGCAT 	15
-------------------------------------------------------AAGCTAGATTACCAAAGCAT 	1


Overlaps with: MNEST036375 MNEST036376
Overlaps with miRBase pre-miRNAs: dme-mir-79
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
14 Drosophila melanogaster GSM360260-14326 TAAAGCTAGATTACCAAAGCAT GCTTTGGCGCTTTAGCTGTATG down 5 0


Secondary structure

TGACTTGCCATTGCTTTGGCGCTTTAGCTGTATGATAGATTTAAACTACTTCATAAAGCTAGATTACCAAAGCATTGGCTTCTG
------------GCTTTGGCGCTTTAGCTGTATGA 	29
------------GCTTTGGCGCTTTAGCTGTATG 	28
------------GCTTTGGCGCTTTAGCTGT 	4
------------GCTTTGGCGCTTTAGCTGTAT 	1
----------------------------------------------------ATAAAGCTAGATTACCAAAGCAT 	174
----------------------------------------------------ATAAAGCTAGATTACCAAAGCA 	4
-----------------------------------------------------TAAAGCTAGATTACCAAAGCAT 	2011
-----------------------------------------------------TAAAGCTAGATTACCAAAGCA 	24
-----------------------------------------------------TAAAGCTAGATTACCAAAGCATT 	2
------------------------------------------------------AAAGCTAGATTACCAAAGCATT 	3
------------------------------------------------------AAAGCTAGATTACCAAAGCAT 	16
--------------------------------------------------------AGCTAGATTACCAAAGCAT 	1


Overlaps with: MNEST036375 MNEST036376
Overlaps with miRBase pre-miRNAs: dme-mir-79
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
15 Drosophila melanogaster GSM322543-14323 TAAAGCTAGATTACCAAAGCAT GCTTTGGCGCTTTAGCTGTATG down 5 0


Secondary structure

TGACTTGCCATTGCTTTGGCGCTTTAGCTGTATGATAGATTTAAACTACTTCATAAAGCTAGATTACCAAAGCATTGGCTTCTG
------------GCTTTGGCGCTTTAGCTGTATGA 	33
------------GCTTTGGCGCTTTAGCTGTATG 	13
-------------CTTTGGCGCTTTAGCTGTATGA 	14
-------------CTTTGGCGCTTTAGCTGTATG 	1
----------------------------------------------------ATAAAGCTAGATTACCAAAGCAT 	449
----------------------------------------------------ATAAAGCTAGATTACCAAAG 	3
----------------------------------------------------ATAAAGCTAGATTACCAAAGC 	37
----------------------------------------------------ATAAAGCTAGATTACCAAAGCA 	84
-----------------------------------------------------TAAAGCTAGATTACCAAAGCAT 	2934
-----------------------------------------------------TAAAGCTAGATTACCAAAGCA 	147
-----------------------------------------------------TAAAGCTAGATTACCAAAG 	3
-----------------------------------------------------TAAAGCTAGATTACCAAAGC 	32
-----------------------------------------------------TAAAGCTAGATTACCAAAGCATT 	3
------------------------------------------------------AAAGCTAGATTACCAAAGCATT 	18
------------------------------------------------------AAAGCTAGATTACCAAAGCAT 	44
-------------------------------------------------------AAGCTAGATTACCAAAGCAT 	6


Overlaps with: MNEST036375 MNEST036376
Overlaps with miRBase pre-miRNAs: dme-mir-79
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
16 Drosophila melanogaster GSM286607-9796 TAAAGCTAGATTACCAAAGCAT GCTTTGGCGCTTTAGCTGTATG down 5 0


Secondary structure

TGACTTGCCATTGCTTTGGCGCTTTAGCTGTATGATAGATTTAAACTACTTCATAAAGCTAGATTACCAAAGCATTGGCTTCTG
------------GCTTTGGCGCTTTAGCTGTATGA 	50
------------GCTTTGGCGCTTTAGCTGTATG 	34
--------------TTTGGCGCTTTAGCTGTATGA 	10
----------------------------------------------------ATAAAGCTAGATTACCAAAGCAT 	342
----------------------------------------------------ATAAAGCTAGATTACCAAAGCA 	13
-----------------------------------------------------TAAAGCTAGATTACCAAAGCAT 	1801
-----------------------------------------------------TAAAGCTAGATTACCAAAGCA 	45
-----------------------------------------------------TAAAGCTAGATTACCAAAGCATT 	7
------------------------------------------------------AAAGCTAGATTACCAAAGCATT 	5
------------------------------------------------------AAAGCTAGATTACCAAAGCAT 	17


Overlaps with: MNEST036375 MNEST036376
Overlaps with miRBase pre-miRNAs: dme-mir-79
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
17 Drosophila melanogaster GSM399101-5265 TAAAGCTAGATTACCAAAGCAT GCTTTGGCGCTTTAGCTGTATG down 5 0


Secondary structure

TGACTTGCCATTGCTTTGGCGCTTTAGCTGTATGATAGATTTAAACTACTTCATAAAGCTAGATTACCAAAGCATTGGCTTCTG
------------GCTTTGGCGCTTTAGCTGTA 	5
------------GCTTTGGCGCTTTAGCTGTATGA 	243
------------GCTTTGGCGCTTTAGCTGTATGAT 	1
------------GCTTTGGCGCTTTAGCTGT 	1
------------GCTTTGGCGCTTTAGCTGTAT 	2
------------GCTTTGGCGCTTTAGCTGTATG 	149
-------------CTTTGGCGCTTTAGCTGTATG 	2
-------------CTTTGGCGCTTTAGCTGTA 	1
-------------CTTTGGCGCTTTAGCTGTATGA 	5
--------------TTTGGCGCTTTAGCTGTATGA 	4
---------------TTGGCGCTTTAGCTGTATGAT 	1
---------------TTGGCGCTTTAGCTGTATGA 	1
----------------------------------ATAGATTTAAACTACTTCA 	1
-------------------------------------------------TTCATAAAGCTAGATTACCAAAGCAT 	1
----------------------------------------------------ATAAAGCTAGATTACCAAA 	2
----------------------------------------------------ATAAAGCTAGATTACCAAAGCATT 	5
----------------------------------------------------ATAAAGCTAGATTACCAAAGCA 	85
----------------------------------------------------ATAAAGCTAGATTACCAAAG 	23
----------------------------------------------------ATAAAGCTAGATTACCAAAGC 	33
----------------------------------------------------ATAAAGCTAGATTACCAAAGCAT 	2493
-----------------------------------------------------TAAAGCTAGATTACCAAAG 	17
-----------------------------------------------------TAAAGCTAGATTACCAAAGC 	110
-----------------------------------------------------TAAAGCTAGATTACCAAAGCAT 	4982
-----------------------------------------------------TAAAGCTAGATTACCAAAGCA 	144
-----------------------------------------------------TAAAGCTAGATTACCAAAGCATT 	23
------------------------------------------------------AAAGCTAGATTACCAAAGCATT 	8
------------------------------------------------------AAAGCTAGATTACCAAAGCAT 	26
------------------------------------------------------AAAGCTAGATTACCAAAGCA 	1
-------------------------------------------------------AAGCTAGATTACCAAAGCAT 	1


Overlaps with: MNEST036375 MNEST036376
Overlaps with miRBase pre-miRNAs: dme-mir-79
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
18 Drosophila melanogaster GSM286604-9792 TAAAGCTAGATTACCAAAGCAT GCTTTGGCGCTTTAGCTGTATG down 5 0


Secondary structure

TGACTTGCCATTGCTTTGGCGCTTTAGCTGTATGATAGATTTAAACTACTTCATAAAGCTAGATTACCAAAGCATTGGCTTCTG
------------GCTTTGGCGCTTTAGCTGTATG 	2
--------------------------------------------------TCATAAAGCTAGATTACCAAAG 	1
----------------------------------------------------ATAAAGCTAGATTACCAAAGCAT 	192
----------------------------------------------------ATAAAGCTAGATTACCAAAGCA 	9
-----------------------------------------------------TAAAGCTAGATTACCAAAGC 	2
-----------------------------------------------------TAAAGCTAGATTACCAAAGCAT 	2628
-----------------------------------------------------TAAAGCTAGATTACCAAAGCA 	86
-----------------------------------------------------TAAAGCTAGATTACCAAAGCATT 	23
------------------------------------------------------AAAGCTAGATTACCAAAGCATT 	8
------------------------------------------------------AAAGCTAGATTACCAAAGCAT 	15
-------------------------------------------------------AAGCTAGATTACCAAAGCAT 	14


Overlaps with: MNEST036375 MNEST036376
Overlaps with miRBase pre-miRNAs: dme-mir-79
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
19 Drosophila melanogaster GSM385744-16261 TAAAGCTAGATTACCAAAGCAT GCTTTGGCGCTTTAGCTGTATG down 5 0


Secondary structure

TGACTTGCCATTGCTTTGGCGCTTTAGCTGTATGATAGATTTAAACTACTTCATAAAGCTAGATTACCAAAGCATTGGCTTCTG
-----------TGCTTTGGCGCTTTAGCTGTAT 	2
------------GCTTTGGCGCTTTAGCTGTATG 	10
------------GCTTTGGCGCTTTAGCTGTA 	2
------------GCTTTGGCGCTTTAGCTGTATGA 	22
------------GCTTTGGCGCTTTAGCTGT 	3
------------GCTTTGGCGCTTTAGCTGTAT 	11
-------------CTTTGGCGCTTTAGCTGTAT 	1
-------------CTTTGGCGCTTTAGCTGTATGA 	8
--------------TTTGGCGCTTTAGCTGTATGA 	1
----------------------------------ATAGATTTAAACTACTTCA 	2
--------------------------------------------------TCATAAAGCTAGATTACCAA 	1
--------------------------------------------------TCATAAAGCTAGATTACCAAAGCAT 	4
---------------------------------------------------CATAAAGCTAGATTACCAAAGCAT 	35
---------------------------------------------------CATAAAGCTAGATTACCAAAGCA 	3
----------------------------------------------------ATAAAGCTAGATTACCAAAGC 	117
----------------------------------------------------ATAAAGCTAGATTACCAAAGCAT 	11309
----------------------------------------------------ATAAAGCTAGATTACCAAA 	34
----------------------------------------------------ATAAAGCTAGATTACCAAAGCATT 	23
----------------------------------------------------ATAAAGCTAGATTACCAAAGCA 	469
----------------------------------------------------ATAAAGCTAGATTACCAAAG 	77
----------------------------------------------------ATAAAGCTAGATTACCAAAGCATTG 	3
-----------------------------------------------------TAAAGCTAGATTACCAAAGC 	229
-----------------------------------------------------TAAAGCTAGATTACCAAAGCATT 	387
-----------------------------------------------------TAAAGCTAGATTACCAAAGCATTG 	7
-----------------------------------------------------TAAAGCTAGATTACCAAAG 	118
-----------------------------------------------------TAAAGCTAGATTACCAAAGCAT 	43680
-----------------------------------------------------TAAAGCTAGATTACCAAAGCA 	806
------------------------------------------------------AAAGCTAGATTACCAAAGC 	15
------------------------------------------------------AAAGCTAGATTACCAAAGCATT 	1489
------------------------------------------------------AAAGCTAGATTACCAAAGCAT 	1650
------------------------------------------------------AAAGCTAGATTACCAAAGCA 	71
------------------------------------------------------AAAGCTAGATTACCAAAGCATTG 	1
-------------------------------------------------------AAGCTAGATTACCAAAGCATT 	6
-------------------------------------------------------AAGCTAGATTACCAAAGCAT 	11
--------------------------------------------------------AGCTAGATTACCAAAGCAT 	9
---------------------------------------------------------GCTAGATTACCAAAGCATT 	2


Overlaps with: MNEST036375 MNEST036376
Overlaps with miRBase pre-miRNAs: dme-mir-79
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
20 Drosophila melanogaster GSM322208-14317 TAAAGCTAGATTACCAAAGCAT GCTTTGGCGCTTTAGCTGTATG down 5 0


Secondary structure

TGACTTGCCATTGCTTTGGCGCTTTAGCTGTATGATAGATTTAAACTACTTCATAAAGCTAGATTACCAAAGCATTGGCTTCTG
------------GCTTTGGCGCTTTAGCTGTA 	1
------------GCTTTGGCGCTTTAGCTGTATGA 	17
------------GCTTTGGCGCTTTAGCTGT 	1
------------GCTTTGGCGCTTTAGCTGTAT 	2
------------GCTTTGGCGCTTTAGCTGTATG 	8
----------------------------------------------------ATAAAGCTAGATTACCAAA 	1
----------------------------------------------------ATAAAGCTAGATTACCAAAGCATT 	1
----------------------------------------------------ATAAAGCTAGATTACCAAAGCA 	11
----------------------------------------------------ATAAAGCTAGATTACCAAAGC 	3
----------------------------------------------------ATAAAGCTAGATTACCAAAGCAT 	33
-----------------------------------------------------TAAAGCTAGATTACCAAAG 	11
-----------------------------------------------------TAAAGCTAGATTACCAAAGC 	7
-----------------------------------------------------TAAAGCTAGATTACCAAAGCAT 	420
-----------------------------------------------------TAAAGCTAGATTACCAAAGCA 	59
------------------------------------------------------AAAGCTAGATTACCAAAGCATT 	1
------------------------------------------------------AAAGCTAGATTACCAAAGCAT 	2
-------------------------------------------------------AAGCTAGATTACCAAAGCAT 	2
--------------------------------------------------------AGCTAGATTACCAAAGCAT 	1


Overlaps with: MNEST036375 MNEST036376
Overlaps with miRBase pre-miRNAs: dme-mir-79
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
21 Drosophila melanogaster GSM385748-16264 TAAAGCTAGATTACCAAAGCAT GCTTTGGCGCTTTAGCTGTATG down 5 0


Secondary structure

TGACTTGCCATTGCTTTGGCGCTTTAGCTGTATGATAGATTTAAACTACTTCATAAAGCTAGATTACCAAAGCATTGGCTTCTG
-----------TGCTTTGGCGCTTTAGCTGTAT 	2
------------GCTTTGGCGCTTTAGCTGT 	7
------------GCTTTGGCGCTTTAGCTGTATG 	16
------------GCTTTGGCGCTTTAGCTGTA 	8
------------GCTTTGGCGCTTTAGCTGTATGA 	46
------------GCTTTGGCGCTTTAGCTGTAT 	21
-------------CTTTGGCGCTTTAGCTGTAT 	1
-------------CTTTGGCGCTTTAGCTGTATGA 	9
--------------TTTGGCGCTTTAGCTGTATGA 	4
---------------------------------GATAGATTTAAACTACTTCAT 	1
----------------------------------ATAGATTTAAACTACTTCA 	5
----------------------------------ATAGATTTAAACTACTTCATAAAGCT 	1
--------------------------------------------------TCATAAAGCTAGATTACCAAAGCAT 	6
--------------------------------------------------TCATAAAGCTAGATTACCAA 	1
---------------------------------------------------CATAAAGCTAGATTACCAAAG 	1
---------------------------------------------------CATAAAGCTAGATTACCAAAGCAT 	90
---------------------------------------------------CATAAAGCTAGATTACCAAAGCA 	8
----------------------------------------------------ATAAAGCTAGATTACCAAAGCATTGG 	1
----------------------------------------------------ATAAAGCTAGATTACCAAAGCAT 	24472
----------------------------------------------------ATAAAGCTAGATTACCAAA 	57
----------------------------------------------------ATAAAGCTAGATTACCAAAGCATT 	51
----------------------------------------------------ATAAAGCTAGATTACCAAAG 	159
----------------------------------------------------ATAAAGCTAGATTACCAAAGC 	255
----------------------------------------------------ATAAAGCTAGATTACCAAAGCA 	996
----------------------------------------------------ATAAAGCTAGATTACCAAAGCATTG 	6
-----------------------------------------------------TAAAGCTAGATTACCAAAGCATTGG 	2
-----------------------------------------------------TAAAGCTAGATTACCAAAGCATTG 	19
-----------------------------------------------------TAAAGCTAGATTACCAAAG 	224
-----------------------------------------------------TAAAGCTAGATTACCAAAGC 	475
-----------------------------------------------------TAAAGCTAGATTACCAAAGCATT 	731
-----------------------------------------------------TAAAGCTAGATTACCAAAGCAT 	89396
-----------------------------------------------------TAAAGCTAGATTACCAAAGCA 	1686
------------------------------------------------------AAAGCTAGATTACCAAAGCATT 	3303
------------------------------------------------------AAAGCTAGATTACCAAAGCAT 	3591
------------------------------------------------------AAAGCTAGATTACCAAAGC 	39
------------------------------------------------------AAAGCTAGATTACCAAAGCA 	159
------------------------------------------------------AAAGCTAGATTACCAAAGCATTG 	6
-------------------------------------------------------AAGCTAGATTACCAAAGCATT 	7
-------------------------------------------------------AAGCTAGATTACCAAAGCAT 	38
--------------------------------------------------------AGCTAGATTACCAAAGCAT 	20
---------------------------------------------------------GCTAGATTACCAAAGCATT 	4


Overlaps with: MNEST036375 MNEST036376
Overlaps with miRBase pre-miRNAs: dme-mir-79
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
22 Drosophila melanogaster GSM399110-16285 TAAAGCTAGATTACCAAAGCAT GCTTTGGCGCTTTAGCTGTATG down 5 0


Secondary structure

TGACTTGCCATTGCTTTGGCGCTTTAGCTGTATGATAGATTTAAACTACTTCATAAAGCTAGATTACCAAAGCATTGGCTTCTG
------------GCTTTGGCGCTTTAGCTGTA 	19
------------GCTTTGGCGCTTTAGCTGTATGA 	50
------------GCTTTGGCGCTTTAGCTGTATG 	14
------------GCTTTGGCGCTTTAGCTGT 	1
------------GCTTTGGCGCTTTAGCTGTAT 	7
----------------------------------------------------ATAAAGCTAGATTACCAAAG 	2
----------------------------------------------------ATAAAGCTAGATTACCAAAGC 	8
----------------------------------------------------ATAAAGCTAGATTACCAAAGCATT 	1
----------------------------------------------------ATAAAGCTAGATTACCAAAGCAT 	1082
----------------------------------------------------ATAAAGCTAGATTACCAAAGCA 	98
-----------------------------------------------------TAAAGCTAGATTACCAAAGC 	21
-----------------------------------------------------TAAAGCTAGATTACCAAAGCAT 	10832
-----------------------------------------------------TAAAGCTAGATTACCAAAGCA 	165
-----------------------------------------------------TAAAGCTAGATTACCAAAG 	27
-----------------------------------------------------TAAAGCTAGATTACCAAAGCATT 	68
------------------------------------------------------AAAGCTAGATTACCAAAGCATT 	41
------------------------------------------------------AAAGCTAGATTACCAAAGCA 	8
------------------------------------------------------AAAGCTAGATTACCAAAGCAT 	116
-------------------------------------------------------AAGCTAGATTACCAAAGCAT 	29


Overlaps with: MNEST036375 MNEST036376
Overlaps with miRBase pre-miRNAs: dme-mir-79
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
23 Drosophila melanogaster GSM466492_dcr-2_homozygotes_untreated TAAAGCTAGATTACCAAAGCAT GCTTTGGCGCTTTAGCTGTATG down 5 0


Secondary structure

TGACTTGCCATTGCTTTGGCGCTTTAGCTGTATGATAGATTTAAACTACTTCATAAAGCTAGATTACCAAAGCATTGGCTTCTG
------------GCTTTGGCGCTTTAGCTGTA 	1
------------GCTTTGGCGCTTTAGCTGTATGA 	16
------------GCTTTGGCGCTTTAGCTGTATG 	15
------------GCTTTGGCGCTTTAGCTGTAT 	2
-------------CTTTGGCGCTTTAGCTGTATGA 	4
--------------TTTGGCGCTTTAGCTGTATGA 	1
---------------TTGGCGCTTTAGCTGTATGA 	1
----------------------------------ATAGATTTAAACTACTTCA 	1
---------------------------------------------------CATAAAGCTAGATTACCAAAGCAT 	9
----------------------------------------------------ATAAAGCTAGATTACCAAAGCAT 	2390
----------------------------------------------------ATAAAGCTAGATTACCAAAG 	9
----------------------------------------------------ATAAAGCTAGATTACCAAA 	4
----------------------------------------------------ATAAAGCTAGATTACCAAAGCA 	94
----------------------------------------------------ATAAAGCTAGATTACCAAAGC 	24
-----------------------------------------------------TAAAGCTAGATTACCAAAGCAT 	3365
-----------------------------------------------------TAAAGCTAGATTACCAAAGCA 	112
-----------------------------------------------------TAAAGCTAGATTACCAAAG 	14
-----------------------------------------------------TAAAGCTAGATTACCAAAGC 	28
-----------------------------------------------------TAAAGCTAGATTACCAAAGCATT 	5
------------------------------------------------------AAAGCTAGATTACCAAAGCATT 	13
------------------------------------------------------AAAGCTAGATTACCAAAGC 	1
------------------------------------------------------AAAGCTAGATTACCAAAGCAT 	114
------------------------------------------------------AAAGCTAGATTACCAAAGCA 	1
-------------------------------------------------------AAGCTAGATTACCAAAGCAT 	9
--------------------------------------------------------AGCTAGATTACCAAAGCAT 	1


Overlaps with: MNEST036375 MNEST036376
Overlaps with miRBase pre-miRNAs: dme-mir-79
HuntMi prediction: true miRNA