miRNEST 2.0, an integrative microRNA resource :: deep sequencing predictions

Please select library, species and/or miRNA sequence.

selected mature miRNA sequence: TAACAGTCTACAGCCATGGTCG

selected species: Mus musculus

24 records found

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
1	Mus musculus	GSM527274-2107	TAACAGTCTACAGCCATGGTCG	ACCGTGGCTTTCGATTGTTACT	down	4	0

Secondary structure

CCGCCCCCGCGTCTCCAGGGCAACCGTGGCTTTCGATTGTTACTGTGGGAACCGGAGGTAACAGTCTACAGCCATGGTCGCCCCGCAGCACGCCCACGC
---------------------AACCGTGGCTTTCGATTGTTAC 	68
---------------------AACCGTGGCTTTCGATTGTTACT 	9
---------------------AACCGTGGCTTTCGATTGTT 	65
---------------------AACCGTGGCTTTCGATTGT 	2
---------------------AACCGTGGCTTTCGATTGTTA 	56
----------------------ACCGTGGCTTTCGATTGTTACT 	740
----------------------ACCGTGGCTTTCGATTGTTAC 	94
----------------------ACCGTGGCTTTCGATTGTTA 	14
----------------------ACCGTGGCTTTCGATTGTT 	14
-----------------------CCGTGGCTTTCGATTGTTACT 	9
-----------------------CCGTGGCTTTCGATTGTTAC 	2
------------------------CGTGGCTTTCGATTGTTAC 	1
------------------------CGTGGCTTTCGATTGTTACT 	5
-------------------------GTGGCTTTCGATTGTTACT 	2
----------------------------------------------------------TAACAGTCTACAGCCATGGTCG 	10187
----------------------------------------------------------TAACAGTCTACAGCCATGGT 	253
----------------------------------------------------------TAACAGTCTACAGCCATGGTC 	791
----------------------------------------------------------TAACAGTCTACAGCCATGGTCGC 	18
----------------------------------------------------------TAACAGTCTACAGCCATGG 	131
-----------------------------------------------------------AACAGTCTACAGCCATGGTC 	60
-----------------------------------------------------------AACAGTCTACAGCCATGGTCGC 	13
-----------------------------------------------------------AACAGTCTACAGCCATGGTCG 	522
-----------------------------------------------------------AACAGTCTACAGCCATGGT 	16
------------------------------------------------------------ACAGTCTACAGCCATGGTC 	3
------------------------------------------------------------ACAGTCTACAGCCATGGTCG 	32
------------------------------------------------------------ACAGTCTACAGCCATGGTCGC 	23
-------------------------------------------------------------CAGTCTACAGCCATGGTCG 	3
--------------------------------------------------------------AGTCTACAGCCATGGTCGC 	1

Overlaps with: MNEST026700
Overlaps with miRBase pre-miRNAs: cgr-mir-132 ssc-mir-132 bta-mir-132 cfa-mir-132 mmu-mir-132 rno-mir-132
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
2	Mus musculus	GSM527280	TAACAGTCTACAGCCATGGTCG	ACCGTGGCTTTCGATTGTTACT	down	4	0

Secondary structure

CCGCCCCCGCGTCTCCAGGGCAACCGTGGCTTTCGATTGTTACTGTGGGAACCGGAGGTAACAGTCTACAGCCATGGTCGCCCCGCAGCACGCCCACGC
---------------------AACCGTGGCTTTCGATTGTTAC 	12
---------------------AACCGTGGCTTTCGATTGTT 	21
---------------------AACCGTGGCTTTCGATTGT 	1
---------------------AACCGTGGCTTTCGATTGTTA 	39
---------------------AACCGTGGCTTTCGATTGTTACT 	2
----------------------ACCGTGGCTTTCGATTGTTAC 	55
----------------------ACCGTGGCTTTCGATTGTTACT 	312
----------------------ACCGTGGCTTTCGATTGTTA 	5
----------------------ACCGTGGCTTTCGATTGTT 	3
-----------------------CCGTGGCTTTCGATTGTTACT 	1
------------------------CGTGGCTTTCGATTGTTACT 	6
----------------------------------------------------------TAACAGTCTACAGCCATGGTCG 	4596
----------------------------------------------------------TAACAGTCTACAGCCATGGTCGC 	12
----------------------------------------------------------TAACAGTCTACAGCCATGGT 	136
----------------------------------------------------------TAACAGTCTACAGCCATGGTC 	454
----------------------------------------------------------TAACAGTCTACAGCCATGG 	50
-----------------------------------------------------------AACAGTCTACAGCCATGGTCGC 	2
-----------------------------------------------------------AACAGTCTACAGCCATGGTCG 	230
-----------------------------------------------------------AACAGTCTACAGCCATGGTC 	11
-----------------------------------------------------------AACAGTCTACAGCCATGGT 	8
------------------------------------------------------------ACAGTCTACAGCCATGGTCG 	9
------------------------------------------------------------ACAGTCTACAGCCATGGTC 	1
------------------------------------------------------------ACAGTCTACAGCCATGGTCGC 	6

Overlaps with: MNEST026700
Overlaps with miRBase pre-miRNAs: cgr-mir-132 ssc-mir-132 bta-mir-132 cfa-mir-132 mmu-mir-132 rno-mir-132
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
3	Mus musculus	GSM539868	TAACAGTCTACAGCCATGGTCG	ACCGTGGCTTTCGATTGTTACT	down	4	0

Secondary structure

CCGCCCCCGCGTCTCCAGGGCAACCGTGGCTTTCGATTGTTACTGTGGGAACCGGAGGTAACAGTCTACAGCCATGGTCGCCCCGCAGCACGCCCACGC
----------------------ACCGTGGCTTTCGATTGTTACT 	1
----------------------------------------------------------TAACAGTCTACAGCCATGGTCG 	8
------------------------------------------------------------ACAGTCTACAGCCATGGTCG 	2

Overlaps with: MNEST026700
Overlaps with miRBase pre-miRNAs: cgr-mir-132 ssc-mir-132 bta-mir-132 cfa-mir-132 mmu-mir-132 rno-mir-132
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
4	Mus musculus	GSM539838	TAACAGTCTACAGCCATGGTCG	ACCGTGGCTTTCGATTGTTACT	down	4	0

Secondary structure

CCGCCCCCGCGTCTCCAGGGCAACCGTGGCTTTCGATTGTTACTGTGGGAACCGGAGGTAACAGTCTACAGCCATGGTCGCCCCGCAGCACGCCCACGC
----------------------ACCGTGGCTTTCGATTGTTACT 	3
----------------------ACCGTGGCTTTCGATTGTT 	1
----------------------------------------------------------TAACAGTCTACAGCCATGGTCG 	6
-----------------------------------------------------------AACAGTCTACAGCCATGGTCG 	2

Overlaps with: MNEST026700
Overlaps with miRBase pre-miRNAs: cgr-mir-132 ssc-mir-132 bta-mir-132 cfa-mir-132 mmu-mir-132 rno-mir-132
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
5	Mus musculus	GSM539850	TAACAGTCTACAGCCATGGTCG	ACCGTGGCTTTCGATTGTTACT	down	4	0

Secondary structure

CCGCCCCCGCGTCTCCAGGGCAACCGTGGCTTTCGATTGTTACTGTGGGAACCGGAGGTAACAGTCTACAGCCATGGTCGCCCCGCAGCACGCCCACGC
----------------------ACCGTGGCTTTCGATTGTTA 	1
----------------------ACCGTGGCTTTCGATTGTTAC 	1
----------------------------------------------------------TAACAGTCTACAGCCATGGTCG 	8
----------------------------------------------------------TAACAGTCTACAGCCATGG 	1
----------------------------------------------------------TAACAGTCTACAGCCATGGTC 	4
----------------------------------------------------------TAACAGTCTACAGCCATGGT 	2
-----------------------------------------------------------AACAGTCTACAGCCATGGTC 	1
------------------------------------------------------------ACAGTCTACAGCCATGGTCG 	3

Overlaps with: MNEST026700
Overlaps with miRBase pre-miRNAs: cgr-mir-132 ssc-mir-132 bta-mir-132 cfa-mir-132 mmu-mir-132 rno-mir-132
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
6	Mus musculus	GSM539835	TAACAGTCTACAGCCATGGTCG	ACCGTGGCTTTCGATTGTTACT	down	4	0

Secondary structure

CCGCCCCCGCGTCTCCAGGGCAACCGTGGCTTTCGATTGTTACTGTGGGAACCGGAGGTAACAGTCTACAGCCATGGTCGCCCCGCAGCACGCCCACGC
----------------------ACCGTGGCTTTCGATTGTTACT 	1
----------------------------------------------------------TAACAGTCTACAGCCATGGTCG 	7
-----------------------------------------------------------AACAGTCTACAGCCATGGTCG 	1
------------------------------------------------------------ACAGTCTACAGCCATGGTCG 	1

Overlaps with: MNEST026700
Overlaps with miRBase pre-miRNAs: cgr-mir-132 ssc-mir-132 bta-mir-132 cfa-mir-132 mmu-mir-132 rno-mir-132
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
7	Mus musculus	GSM539855	TAACAGTCTACAGCCATGGTCG	ACCGTGGCTTTCGATTGTTACT	down	4	0

Secondary structure

CCGCCCCCGCGTCTCCAGGGCAACCGTGGCTTTCGATTGTTACTGTGGGAACCGGAGGTAACAGTCTACAGCCATGGTCGCCCCGCAGCACGCCCACGC
---------------------AACCGTGGCTTTCGATTGTTA 	1
----------------------ACCGTGGCTTTCGATTGTTACT 	10
----------------------ACCGTGGCTTTCGATTGTTAC 	2
----------------------------------------------------------TAACAGTCTACAGCCATGGTCG 	96
----------------------------------------------------------TAACAGTCTACAGCCATGGTC 	6
----------------------------------------------------------TAACAGTCTACAGCCATGGTCGC 	1
----------------------------------------------------------TAACAGTCTACAGCCATGGT 	1
----------------------------------------------------------TAACAGTCTACAGCCATGG 	1
-----------------------------------------------------------AACAGTCTACAGCCATGGTCG 	5
------------------------------------------------------------ACAGTCTACAGCCATGGTCG 	7

Overlaps with: MNEST026700
Overlaps with miRBase pre-miRNAs: cgr-mir-132 ssc-mir-132 bta-mir-132 cfa-mir-132 mmu-mir-132 rno-mir-132
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
8	Mus musculus	GSM527276	TAACAGTCTACAGCCATGGTCG	ACCGTGGCTTTCGATTGTTACT	down	4	0

Secondary structure

CCGCCCCCGCGTCTCCAGGGCAACCGTGGCTTTCGATTGTTACTGTGGGAACCGGAGGTAACAGTCTACAGCCATGGTCGCCCCGCAGCACGCCCACGC
---------------------AACCGTGGCTTTCGATTGTTAC 	28
---------------------AACCGTGGCTTTCGATTGT 	2
---------------------AACCGTGGCTTTCGATTGTT 	41
---------------------AACCGTGGCTTTCGATTGTTA 	69
---------------------AACCGTGGCTTTCGATTGTTACT 	12
----------------------ACCGTGGCTTTCGATTGTTAC 	93
----------------------ACCGTGGCTTTCGATTGTTACT 	628
----------------------ACCGTGGCTTTCGATTGTTA 	14
----------------------ACCGTGGCTTTCGATTGTT 	5
-----------------------CCGTGGCTTTCGATTGTTAC 	1
-----------------------CCGTGGCTTTCGATTGTTA 	1
-----------------------CCGTGGCTTTCGATTGTTACT 	4
------------------------CGTGGCTTTCGATTGTTACT 	5
-------------------------GTGGCTTTCGATTGTTACT 	1
----------------------------------------------------------TAACAGTCTACAGCCATGGTCG 	9205
----------------------------------------------------------TAACAGTCTACAGCCATGGTCGC 	31
----------------------------------------------------------TAACAGTCTACAGCCATGGT 	202
----------------------------------------------------------TAACAGTCTACAGCCATGGTC 	732
----------------------------------------------------------TAACAGTCTACAGCCATGG 	136
-----------------------------------------------------------AACAGTCTACAGCCATGGTCGC 	10
-----------------------------------------------------------AACAGTCTACAGCCATGGTCG 	470
-----------------------------------------------------------AACAGTCTACAGCCATGGTC 	37
-----------------------------------------------------------AACAGTCTACAGCCATGGT 	8
------------------------------------------------------------ACAGTCTACAGCCATGGTCG 	21
------------------------------------------------------------ACAGTCTACAGCCATGGTC 	4
------------------------------------------------------------ACAGTCTACAGCCATGGTCGC 	14
-------------------------------------------------------------CAGTCTACAGCCATGGTCGC 	1
-------------------------------------------------------------CAGTCTACAGCCATGGTCG 	2

Overlaps with: MNEST026700
Overlaps with miRBase pre-miRNAs: cgr-mir-132 ssc-mir-132 bta-mir-132 cfa-mir-132 mmu-mir-132 rno-mir-132
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
9	Mus musculus	GSM539869	TAACAGTCTACAGCCATGGTCG	ACCGTGGCTTTCGATTGTTACT	down	4	0

Secondary structure

CCGCCCCCGCGTCTCCAGGGCAACCGTGGCTTTCGATTGTTACTGTGGGAACCGGAGGTAACAGTCTACAGCCATGGTCGCCCCGCAGCACGCCCACGC
CCGCCCCCGCGTCTCCAGGGCA 	1
-CGCCCCCGCGTCTCCAGGGCA 	1
---------------------AACCGTGGCTTTCGATTGTTAC 	2
---------------------AACCGTGGCTTTCGATTGTTACT 	5
---------------------AACCGTGGCTTTCGATTGTTA 	109
---------------------AACCGTGGCTTTCGATTGTT 	47
---------------------AACCGTGGCTTTCGATTGT 	1
----------------------ACCGTGGCTTTCGATTGTTACT 	1125
----------------------ACCGTGGCTTTCGATTGTTAC 	24
----------------------ACCGTGGCTTTCGATTGTTA 	17
----------------------ACCGTGGCTTTCGATTGTT 	6
----------------------------------------------------------TAACAGTCTACAGCCATGGTCG 	1478
----------------------------------------------------------TAACAGTCTACAGCCATGGTCGCC 	1
----------------------------------------------------------TAACAGTCTACAGCCATGGTCGC 	5
----------------------------------------------------------TAACAGTCTACAGCCATGGTC 	61
----------------------------------------------------------TAACAGTCTACAGCCATGGT 	23
----------------------------------------------------------TAACAGTCTACAGCCATGG 	25
-----------------------------------------------------------AACAGTCTACAGCCATGGTCGC 	3
-----------------------------------------------------------AACAGTCTACAGCCATGGTCG 	182
-----------------------------------------------------------AACAGTCTACAGCCATGGTC 	10
-----------------------------------------------------------AACAGTCTACAGCCATGGT 	1
------------------------------------------------------------ACAGTCTACAGCCATGGTCG 	229
------------------------------------------------------------ACAGTCTACAGCCATGGTCGC 	1
------------------------------------------------------------ACAGTCTACAGCCATGGTC 	7

Overlaps with: MNEST026700
Overlaps with miRBase pre-miRNAs: cgr-mir-132 ssc-mir-132 bta-mir-132 cfa-mir-132 mmu-mir-132 rno-mir-132
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
10	Mus musculus	GSM539870	TAACAGTCTACAGCCATGGTCG	ACCGTGGCTTTCGATTGTTACT	down	4	0

Secondary structure

CCGCCCCCGCGTCTCCAGGGCAACCGTGGCTTTCGATTGTTACTGTGGGAACCGGAGGTAACAGTCTACAGCCATGGTCGCCCCGCAGCACGCCCACGC
----------------------ACCGTGGCTTTCGATTGTTACT 	7
----------------------------------------------------------TAACAGTCTACAGCCATGGTCG 	7

Overlaps with: MNEST026700
Overlaps with miRBase pre-miRNAs: cgr-mir-132 ssc-mir-132 bta-mir-132 cfa-mir-132 mmu-mir-132 rno-mir-132
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
11	Mus musculus	GSM539849	TAACAGTCTACAGCCATGGTCG	ACCGTGGCTTTCGATTGTTACT	down	4	0

Secondary structure

CCGCCCCCGCGTCTCCAGGGCAACCGTGGCTTTCGATTGTTACTGTGGGAACCGGAGGTAACAGTCTACAGCCATGGTCGCCCCGCAGCACGCCCACGC
----------------------ACCGTGGCTTTCGATTGTTACT 	5
----------------------ACCGTGGCTTTCGATTGTTA 	1
----------------------------------------------------------TAACAGTCTACAGCCATGGTCG 	60
----------------------------------------------------------TAACAGTCTACAGCCATGGT 	5
----------------------------------------------------------TAACAGTCTACAGCCATGG 	4
----------------------------------------------------------TAACAGTCTACAGCCATGGTC 	9
-----------------------------------------------------------AACAGTCTACAGCCATGGTCG 	3
------------------------------------------------------------ACAGTCTACAGCCATGGTCG 	3

Overlaps with: MNEST026700
Overlaps with miRBase pre-miRNAs: cgr-mir-132 ssc-mir-132 bta-mir-132 cfa-mir-132 mmu-mir-132 rno-mir-132
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
12	Mus musculus	GSM527277-2110	TAACAGTCTACAGCCATGGTCG	ACCGTGGCTTTCGATTGTTACT	down	4	0

Secondary structure

CCGCCCCCGCGTCTCCAGGGCAACCGTGGCTTTCGATTGTTACTGTGGGAACCGGAGGTAACAGTCTACAGCCATGGTCGCCCCGCAGCACGCCCACGC
---------------------AACCGTGGCTTTCGATTGTT 	68
---------------------AACCGTGGCTTTCGATTGT 	9
---------------------AACCGTGGCTTTCGATTGTTA 	65
---------------------AACCGTGGCTTTCGATTGTTAC 	52
---------------------AACCGTGGCTTTCGATTGTTACT 	12
----------------------ACCGTGGCTTTCGATTGTTAC 	112
----------------------ACCGTGGCTTTCGATTGTTA 	15
----------------------ACCGTGGCTTTCGATTGTT 	8
----------------------ACCGTGGCTTTCGATTGTTACT 	758
------------------------CGTGGCTTTCGATTGTTACT 	5
----------------------------------------------------------TAACAGTCTACAGCCATGGT 	550
----------------------------------------------------------TAACAGTCTACAGCCATGGTCGC 	26
----------------------------------------------------------TAACAGTCTACAGCCATGGTCG 	13945
----------------------------------------------------------TAACAGTCTACAGCCATGGTC 	1495
----------------------------------------------------------TAACAGTCTACAGCCATGG 	236
-----------------------------------------------------------AACAGTCTACAGCCATGGTC 	68
-----------------------------------------------------------AACAGTCTACAGCCATGGTCGC 	16
-----------------------------------------------------------AACAGTCTACAGCCATGGT 	30
-----------------------------------------------------------AACAGTCTACAGCCATGGTCG 	746
------------------------------------------------------------ACAGTCTACAGCCATGGTC 	4
------------------------------------------------------------ACAGTCTACAGCCATGGTCG 	20
------------------------------------------------------------ACAGTCTACAGCCATGGTCGC 	13
-------------------------------------------------------------CAGTCTACAGCCATGGTCG 	2

Overlaps with: MNEST026700
Overlaps with miRBase pre-miRNAs: cgr-mir-132 ssc-mir-132 bta-mir-132 cfa-mir-132 mmu-mir-132 rno-mir-132
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
13	Mus musculus	GSM539848	TAACAGTCTACAGCCATGGTCG	ACCGTGGCTTTCGATTGTTACT	down	4	0

Secondary structure

CCGCCCCCGCGTCTCCAGGGCAACCGTGGCTTTCGATTGTTACTGTGGGAACCGGAGGTAACAGTCTACAGCCATGGTCGCCCCGCAGCACGCCCACGC
---------------------AACCGTGGCTTTCGATTGTTA 	1
----------------------ACCGTGGCTTTCGATTGTTACT 	3
----------------------ACCGTGGCTTTCGATTGTTA 	1
----------------------------------------------------------TAACAGTCTACAGCCATGGTCG 	58
----------------------------------------------------------TAACAGTCTACAGCCATGGTC 	6
----------------------------------------------------------TAACAGTCTACAGCCATGGT 	1
-----------------------------------------------------------AACAGTCTACAGCCATGGTCG 	1
------------------------------------------------------------ACAGTCTACAGCCATGGTCG 	2

Overlaps with: MNEST026700
Overlaps with miRBase pre-miRNAs: cgr-mir-132 ssc-mir-132 bta-mir-132 cfa-mir-132 mmu-mir-132 rno-mir-132
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
14	Mus musculus	GSM539872	TAACAGTCTACAGCCATGGTCG	ACCGTGGCTTTCGATTGTTACT	down	4	0

Secondary structure

CCGCCCCCGCGTCTCCAGGGCAACCGTGGCTTTCGATTGTTACTGTGGGAACCGGAGGTAACAGTCTACAGCCATGGTCGCCCCGCAGCACGCCCACGC
---------------------AACCGTGGCTTTCGATTGTT 	5
---------------------AACCGTGGCTTTCGATTGTTA 	1
----------------------ACCGTGGCTTTCGATTGTTACT 	4
----------------------------------------------------------TAACAGTCTACAGCCATGGTC 	1
----------------------------------------------------------TAACAGTCTACAGCCATGGT 	1
----------------------------------------------------------TAACAGTCTACAGCCATGGTCG 	43
-----------------------------------------------------------AACAGTCTACAGCCATGGTCG 	3
------------------------------------------------------------ACAGTCTACAGCCATGGTCG 	4

Overlaps with: MNEST026700
Overlaps with miRBase pre-miRNAs: cgr-mir-132 ssc-mir-132 bta-mir-132 cfa-mir-132 mmu-mir-132 rno-mir-132
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
15	Mus musculus	GSM539853	TAACAGTCTACAGCCATGGTCG	ACCGTGGCTTTCGATTGTTACT	down	4	0

Secondary structure

CCGCCCCCGCGTCTCCAGGGCAACCGTGGCTTTCGATTGTTACTGTGGGAACCGGAGGTAACAGTCTACAGCCATGGTCGCCCCGCAGCACGCCCACGC
----------------------ACCGTGGCTTTCGATTGTTACT 	2
----------------------------------------------------------TAACAGTCTACAGCCATGGTCG 	55
----------------------------------------------------------TAACAGTCTACAGCCATGGT 	1
----------------------------------------------------------TAACAGTCTACAGCCATGG 	2
----------------------------------------------------------TAACAGTCTACAGCCATGGTC 	6
-----------------------------------------------------------AACAGTCTACAGCCATGGTCG 	3
------------------------------------------------------------ACAGTCTACAGCCATGGTCG 	2

Overlaps with: MNEST026700
Overlaps with miRBase pre-miRNAs: cgr-mir-132 ssc-mir-132 bta-mir-132 cfa-mir-132 mmu-mir-132 rno-mir-132
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
16	Mus musculus	GSM539871	TAACAGTCTACAGCCATGGTCG	ACCGTGGCTTTCGATTGTTACT	down	4	0

Secondary structure

CCGCCCCCGCGTCTCCAGGGCAACCGTGGCTTTCGATTGTTACTGTGGGAACCGGAGGTAACAGTCTACAGCCATGGTCGCCCCGCAGCACGCCCACGC
----------------------ACCGTGGCTTTCGATTGTTACT 	1
----------------------------------------------------------TAACAGTCTACAGCCATGGTCGC 	1
----------------------------------------------------------TAACAGTCTACAGCCATGGTCG 	8
------------------------------------------------------------ACAGTCTACAGCCATGGTC 	1

Overlaps with: MNEST026700
Overlaps with miRBase pre-miRNAs: cgr-mir-132 ssc-mir-132 bta-mir-132 cfa-mir-132 mmu-mir-132 rno-mir-132
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
17	Mus musculus	GSM539878	TAACAGTCTACAGCCATGGTCG	ACCGTGGCTTTCGATTGTTACT	down	4	0

Secondary structure

CCGCCCCCGCGTCTCCAGGGCAACCGTGGCTTTCGATTGTTACTGTGGGAACCGGAGGTAACAGTCTACAGCCATGGTCGCCCCGCAGCACGCCCACGC
---------------------AACCGTGGCTTTCGATTGTTA 	1
---------------------AACCGTGGCTTTCGATTGTT 	1
---------------------AACCGTGGCTTTCGATTGTTACT 	1
----------------------ACCGTGGCTTTCGATTGTTACT 	3
----------------------------------------------------------TAACAGTCTACAGCCATGGTCG 	33
----------------------------------------------------------TAACAGTCTACAGCCATGGTC 	1
-----------------------------------------------------------AACAGTCTACAGCCATGGTCG 	11
------------------------------------------------------------ACAGTCTACAGCCATGGTCG 	12

Overlaps with: MNEST026700
Overlaps with miRBase pre-miRNAs: cgr-mir-132 ssc-mir-132 bta-mir-132 cfa-mir-132 mmu-mir-132 rno-mir-132
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
18	Mus musculus	GSM539873	TAACAGTCTACAGCCATGGTCG	ACCGTGGCTTTCGATTGTTACT	down	4	0

Secondary structure

CCGCCCCCGCGTCTCCAGGGCAACCGTGGCTTTCGATTGTTACTGTGGGAACCGGAGGTAACAGTCTACAGCCATGGTCGCCCCGCAGCACGCCCACGC
----------------------------------------------------------TAACAGTCTACAGCCATGGTCG 	5
-----------------------------------------------------------AACAGTCTACAGCCATGGTCG 	1
------------------------------------------------------------ACAGTCTACAGCCATGGTCG 	1

Overlaps with: MNEST026700
Overlaps with miRBase pre-miRNAs: cgr-mir-132 ssc-mir-132 bta-mir-132 cfa-mir-132 mmu-mir-132 rno-mir-132
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
19	Mus musculus	GSM539875	TAACAGTCTACAGCCATGGTCG	ACCGTGGCTTTCGATTGTTACT	down	4	0

Secondary structure

CCGCCCCCGCGTCTCCAGGGCAACCGTGGCTTTCGATTGTTACTGTGGGAACCGGAGGTAACAGTCTACAGCCATGGTCGCCCCGCAGCACGCCCACGC
---------------------AACCGTGGCTTTCGATTGTTA 	2
----------------------ACCGTGGCTTTCGATTGTTACT 	1
----------------------ACCGTGGCTTTCGATTGTTA 	1
----------------------------------------------------------TAACAGTCTACAGCCATGGTCG 	13
----------------------------------------------------------TAACAGTCTACAGCCATGGT 	3
----------------------------------------------------------TAACAGTCTACAGCCATGG 	1
----------------------------------------------------------TAACAGTCTACAGCCATGGTCGC 	1
----------------------------------------------------------TAACAGTCTACAGCCATGGTC 	6
-----------------------------------------------------------AACAGTCTACAGCCATGGT 	1
------------------------------------------------------------ACAGTCTACAGCCATGGTCG 	5

Overlaps with: MNEST026700
Overlaps with miRBase pre-miRNAs: cgr-mir-132 ssc-mir-132 bta-mir-132 cfa-mir-132 mmu-mir-132 rno-mir-132
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
20	Mus musculus	GSM539867	TAACAGTCTACAGCCATGGTCG	ACCGTGGCTTTCGATTGTTACT	down	4	0

Secondary structure

CCGCCCCCGCGTCTCCAGGGCAACCGTGGCTTTCGATTGTTACTGTGGGAACCGGAGGTAACAGTCTACAGCCATGGTCGCCCCGCAGCACGCCCACGC
---------------------AACCGTGGCTTTCGATTGTTA 	3
---------------------AACCGTGGCTTTCGATTGTT 	3
----------------------ACCGTGGCTTTCGATTGTTACT 	30
----------------------ACCGTGGCTTTCGATTGTTAC 	1
----------------------ACCGTGGCTTTCGATTGTTA 	5
----------------------------------------------------------TAACAGTCTACAGCCATGGTCG 	83
----------------------------------------------------------TAACAGTCTACAGCCATGGTC 	10
----------------------------------------------------------TAACAGTCTACAGCCATGGT 	4
----------------------------------------------------------TAACAGTCTACAGCCATGG 	4
-----------------------------------------------------------AACAGTCTACAGCCATGGTCG 	19
-----------------------------------------------------------AACAGTCTACAGCCATGGTC 	1
-----------------------------------------------------------AACAGTCTACAGCCATGGT 	1
------------------------------------------------------------ACAGTCTACAGCCATGGTCG 	17
------------------------------------------------------------ACAGTCTACAGCCATGGTCGC 	2

Overlaps with: MNEST026700
Overlaps with miRBase pre-miRNAs: cgr-mir-132 ssc-mir-132 bta-mir-132 cfa-mir-132 mmu-mir-132 rno-mir-132
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
21	Mus musculus	GSM539876	TAACAGTCTACAGCCATGGTCG	ACCGTGGCTTTCGATTGTTACT	down	4	0

Secondary structure

CCGCCCCCGCGTCTCCAGGGCAACCGTGGCTTTCGATTGTTACTGTGGGAACCGGAGGTAACAGTCTACAGCCATGGTCGCCCCGCAGCACGCCCACGC
---------------------AACCGTGGCTTTCGATTGTTA 	2
----------------------ACCGTGGCTTTCGATTGTTA 	1
----------------------------------------------------------TAACAGTCTACAGCCATGGTCGC 	1
----------------------------------------------------------TAACAGTCTACAGCCATGGTCG 	17
----------------------------------------------------------TAACAGTCTACAGCCATGGT 	2
----------------------------------------------------------TAACAGTCTACAGCCATGG 	4
----------------------------------------------------------TAACAGTCTACAGCCATGGTC 	3
-----------------------------------------------------------AACAGTCTACAGCCATGGTC 	1
------------------------------------------------------------ACAGTCTACAGCCATGGTCG 	2

Overlaps with: MNEST026700
Overlaps with miRBase pre-miRNAs: cgr-mir-132 ssc-mir-132 bta-mir-132 cfa-mir-132 mmu-mir-132 rno-mir-132
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
22	Mus musculus	GSM539854	TAACAGTCTACAGCCATGGTCG	ACCGTGGCTTTCGATTGTTACT	down	4	0

Secondary structure

CCGCCCCCGCGTCTCCAGGGCAACCGTGGCTTTCGATTGTTACTGTGGGAACCGGAGGTAACAGTCTACAGCCATGGTCGCCCCGCAGCACGCCCACGC
---------------------AACCGTGGCTTTCGATTGTTA 	4
----------------------ACCGTGGCTTTCGATTGTTACT 	17
----------------------ACCGTGGCTTTCGATTGTTA 	2
----------------------------------------------------------TAACAGTCTACAGCCATGGTCGC 	1
----------------------------------------------------------TAACAGTCTACAGCCATGGTCG 	122
----------------------------------------------------------TAACAGTCTACAGCCATGGTC 	15
----------------------------------------------------------TAACAGTCTACAGCCATGGT 	7
----------------------------------------------------------TAACAGTCTACAGCCATGG 	3
-----------------------------------------------------------AACAGTCTACAGCCATGGTCG 	4
-----------------------------------------------------------AACAGTCTACAGCCATGGTC 	1
------------------------------------------------------------ACAGTCTACAGCCATGGTCG 	7

Overlaps with: MNEST026700
Overlaps with miRBase pre-miRNAs: cgr-mir-132 ssc-mir-132 bta-mir-132 cfa-mir-132 mmu-mir-132 rno-mir-132
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
23	Mus musculus	GSM527279-2112	TAACAGTCTACAGCCATGGTCG	ACCGTGGCTTTCGATTGTTACT	down	4	0

Secondary structure

CCGCCCCCGCGTCTCCAGGGCAACCGTGGCTTTCGATTGTTACTGTGGGAACCGGAGGTAACAGTCTACAGCCATGGTCGCCCCGCAGCACGCCCACGC
-CGCCCCCGCGTCTCCAGGGCA 	1
--------------------CAACCGTGGCTTTCGATTGTT 	1
---------------------AACCGTGGCTTTCGATTGTTAC 	138
---------------------AACCGTGGCTTTCGATTGTTACT 	21
---------------------AACCGTGGCTTTCGATTGTT 	166
---------------------AACCGTGGCTTTCGATTGT 	12
---------------------AACCGTGGCTTTCGATTGTTA 	187
----------------------ACCGTGGCTTTCGATTGTTACT 	2168
----------------------ACCGTGGCTTTCGATTGTTAC 	214
----------------------ACCGTGGCTTTCGATTGTTA 	41
----------------------ACCGTGGCTTTCGATTGTT 	17
-----------------------CCGTGGCTTTCGATTGTTACT 	19
-----------------------CCGTGGCTTTCGATTGTTAC 	3
------------------------CGTGGCTTTCGATTGTTAC 	3
------------------------CGTGGCTTTCGATTGTTACT 	17
-------------------------GTGGCTTTCGATTGTTACT 	6
-------------------------------------------------------AGGTAACAGTCTACAGCCATGGTCG 	1
---------------------------------------------------------GTAACAGTCTACAGCCATGGTCG 	1
----------------------------------------------------------TAACAGTCTACAGCCATGGTCG 	35420
----------------------------------------------------------TAACAGTCTACAGCCATGGT 	656
----------------------------------------------------------TAACAGTCTACAGCCATGGTC 	2890
----------------------------------------------------------TAACAGTCTACAGCCATGGTCGC 	83
----------------------------------------------------------TAACAGTCTACAGCCATGG 	263
-----------------------------------------------------------AACAGTCTACAGCCATGGTC 	126
-----------------------------------------------------------AACAGTCTACAGCCATGGTCGC 	33
-----------------------------------------------------------AACAGTCTACAGCCATGGTCG 	1621
-----------------------------------------------------------AACAGTCTACAGCCATGGT 	39
------------------------------------------------------------ACAGTCTACAGCCATGGTC 	3
------------------------------------------------------------ACAGTCTACAGCCATGGTCG 	65
------------------------------------------------------------ACAGTCTACAGCCATGGTCGC 	67
-------------------------------------------------------------CAGTCTACAGCCATGGTCG 	4

Overlaps with: MNEST026700
Overlaps with miRBase pre-miRNAs: cgr-mir-132 ssc-mir-132 bta-mir-132 cfa-mir-132 mmu-mir-132 rno-mir-132
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
24	Mus musculus	GSM539874	TAACAGTCTACAGCCATGGTCG	ACCGTGGCTTTCGATTGTTACT	down	4	0

Secondary structure

CCGCCCCCGCGTCTCCAGGGCAACCGTGGCTTTCGATTGTTACTGTGGGAACCGGAGGTAACAGTCTACAGCCATGGTCGCCCCGCAGCACGCCCACGC
---------------------AACCGTGGCTTTCGATTGTTA 	1
---------------------AACCGTGGCTTTCGATTGTT 	1
----------------------ACCGTGGCTTTCGATTGTTAC 	1
----------------------ACCGTGGCTTTCGATTGTTA 	1
----------------------ACCGTGGCTTTCGATTGTT 	1
----------------------------------------------------------TAACAGTCTACAGCCATGGTCGC 	1
----------------------------------------------------------TAACAGTCTACAGCCATGGTCG 	22
----------------------------------------------------------TAACAGTCTACAGCCATGGT 	3
----------------------------------------------------------TAACAGTCTACAGCCATGG 	3
----------------------------------------------------------TAACAGTCTACAGCCATGGTC 	4
-----------------------------------------------------------AACAGTCTACAGCCATGGTCG 	2
------------------------------------------------------------ACAGTCTACAGCCATGGTCG 	4

Overlaps with: MNEST026700
Overlaps with miRBase pre-miRNAs: cgr-mir-132 ssc-mir-132 bta-mir-132 cfa-mir-132 mmu-mir-132 rno-mir-132
HuntMi prediction: true miRNA