miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: deep sequencing predictions



Please select library, species and/or miRNA sequence.


selected mature miRNA sequence: TAAGACATTATCTGAAGATTTC

selected species: Acyrthosiphon pisum



1 records found  

#specieslibrarymiRNAmiRNA*armmismatchesbulges
1 Acyrthosiphon pisum GSM502519_unique_quant TAAGACATTATCTGAAGATTTC AATTTTCAGATAAAGTTTATTG up 4 0


Secondary structure

TACTTAGTGTAAATTTCAATCATGGTATGATTAGTATAAGATTTTAAATCATAAGACATTATCTGAAGATTTCATTAGAGAATTTTCAGATAAAGTTTATTGTTGTAATATATCTTAGAATCAAAAATTATTTGAAAATTTTATTAGAGA
--------------------------------------------------ATAAGACATTATCTGAAGATTTCATT 	1
--------------------------------------------------ATAAGACATTATCTGAAGATTT 	1
--------------------------------------------------ATAAGACATTATCTGAAGATT 	1
---------------------------------------------------TAAGACATTATCTGAAGATTTC 	14
----------------------------------------------------AAGACATTATCTGAAGATTTCA 	2
-----------------------------------------------------AGACATTATCTGAAGATTTCATT 	3
-----------------------------------------------------AGACATTATCTGAAGATTTCAT 	4
-----------------------------------------------------AGACATTATCTGAAGATTTCATTA 	1

Overlaps with: MNEST035161
Overlaps with miRBase pre-miRNAs: api-mir-3056
HuntMi prediction: true miRNA