miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: deep sequencing predictions



Please select library, species and/or miRNA sequence.


selected mature miRNA sequence: TACTAAATATATTGCACATGTT

selected species: Drosophila melanogaster



2 records found  

#specieslibrarymiRNAmiRNA*armmismatchesbulges
1 Drosophila melanogaster GSM466496_r2d2_homozygotes_untreated TACTAAATATATTGCACATGTT CATGTTCAACATATTTAGCACT up 4 0


Secondary structure

CTATATATGTATGTACTTGTCGGCACTGGAGTACTAAATATATTGCACATGTTCATGCATGTTCAACATATTTAGCACTCAAGTACCGAAAAATGAACAACTAAAAG
-------------------------------TACTAAATATATTGCACATGTT 	6
-----------------------------------------------------------TGTTCAACATATTTAGCACTCA 	1


HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
2 Drosophila melanogaster GSM466496_r2d2_homozygotes_untreated TACTAAATATATTGCACATGTT CATGTTCAACATATTTAGCACT up 4 0


Secondary structure

ACAAACTTGTCGGCACTGGAGTACTAAATATATTGCACATGTTCATGCATGTTCAACATATTTAGCACTCAAGTACCGAAAAATGAA
---------------------TACTAAATATATTGCACATGTT 	6
-------------------------------------------------TGTTCAACATATTTAGCACTCA 	1

Overlaps with: MNEST036708 MNEST036709
Overlaps with miRBase pre-miRNAs: dme-mir-4966
HuntMi prediction: true miRNA