miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: deep sequencing predictions



Please select library, species and/or miRNA sequence.


selected mature miRNA sequence: TAGATTAGATAGCGATTCCATT

selected species: Bombyx mori



1 records found  

#specieslibrarymiRNAmiRNA*armmismatchesbulges
1 Bombyx mori GSM449726_Anterior_silkgland_clean TAGATTAGATAGCGATTCCATT TGGTATCGTTCTTTAATCAACA down 4 0


Secondary structure

TGCAAATATCGCTGAACTGCTGTGGTATCGTTCTTTAATCAACACTTTAATTTGAATAATGTAGATTAGATAGCGATTCCATTTACAGTGTGCGAAAACGCC
---------------------GTGGTATCGTTCTTTAATCA 	2
---------------------GTGGTATCGTTCTTTAATCAAC 	1
----------------------TGGTATCGTTCTTTAATCAACA 	6
-------------------------------------------------------------TAGATTAGATAGCGATTCCATT 	11
-------------------------------------------------------------TAGATTAGATAGCGATTCCATTTA 	3
-------------------------------------------------------------TAGATTAGATAGCGATTCCATTT 	3
-------------------------------------------------------------TAGATTAGATAGCGATTCCAT 	1
--------------------------------------------------------------AGATTAGATAGCGATTCCATTT 	7
--------------------------------------------------------------AGATTAGATAGCGATTCCATTTA 	2

Overlaps with: MNEST035676 MNEST035677
Overlaps with miRBase pre-miRNAs: bmo-mir-2792
HuntMi prediction: true miRNA