miRNEST 2.0, an integrative microRNA resource :: deep sequencing predictions

miRNEST 2.0: an integrative microRNA resource

miRNEST 2.0, an integrative microRNA resource :: deep sequencing predictions

Please select library, species and/or miRNA sequence.

selected mature miRNA sequence: TAGCACCACATGATTCGGCTT

selected species: Drosophila melanogaster

25 records found

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
1	Drosophila melanogaster	GSM360257-14325	TAGCACCACATGATTCGGCTT	GCCCGAATTATGTGGGAGCTGCG	down	2	2

Secondary structure

CTGCACCCCGCAGCCCGAATTATGTGGGAGCTGCGCCGTTTCCGTAATCCGTAGCACCACATGATTCGGCTTCGTGGTACA
------------GCCCGAATTATGTGGGAGCTGCG 	1
-------------CCCGAATTATGTGGGAGCTGCG 	1
-------------CCCGAATTATGTGGGAGCTGCGC 	1
-------------CCCGAATTATGTGGGAGCT 	1
---------------------------------------------------TAGCACCACATGATTCGGCTT 	14

Overlaps with: MNEST036567 MNEST036568
Overlaps with miRBase pre-miRNAs: dme-mir-995
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
2	Drosophila melanogaster	GSM399107-16288	TAGCACCACATGATTCGGCTT	GCCCGAATTATGTGGGAGCTGCG	down	2	2

Secondary structure

CTGCACCCCGCAGCCCGAATTATGTGGGAGCTGCGCCGTTTCCGTAATCCGTAGCACCACATGATTCGGCTTCGTGGTACA
------------GCCCGAATTATGTGGGAGCTG 	1
------------GCCCGAATTATGTGGGAGCTGC 	2
------------GCCCGAATTATGTGGGAGCTGCG 	5
-------------CCCGAATTATGTGGGAGCTGC 	1
-------------CCCGAATTATGTGGGAGCTGCG 	9
-------------CCCGAATTATGTGGGAGCT 	1
---------------------------------------------------TAGCACCACATGATTCGGCT 	22
---------------------------------------------------TAGCACCACATGATTCGGC 	2
---------------------------------------------------TAGCACCACATGATTCGGCTT 	287
---------------------------------------------------TAGCACCACATGATTCGGCTTC 	2
-----------------------------------------------------GCACCACATGATTCGGCTT 	4

Overlaps with: MNEST036567 MNEST036568
Overlaps with miRBase pre-miRNAs: dme-mir-995
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
3	Drosophila melanogaster	GSM399106-16287	TAGCACCACATGATTCGGCTT	GCCCGAATTATGTGGGAGCTGCG	down	2	2

Secondary structure

CTGCACCCCGCAGCCCGAATTATGTGGGAGCTGCGCCGTTTCCGTAATCCGTAGCACCACATGATTCGGCTTCGTGGTACA
------------GCCCGAATTATGTGGGAGCTG 	5
------------GCCCGAATTATGTGGGAGCTGC 	18
------------GCCCGAATTATGTGGGAGCTGCG 	38
------------GCCCGAATTATGTGGGAGC 	1
-------------CCCGAATTATGTGGGAGCTGC 	4
-------------CCCGAATTATGTGGGAGCTGCG 	16
-------------CCCGAATTATGTGGGAGCTGCGC 	2
---------------------------------------------------TAGCACCACATGATTCGGCT 	52
---------------------------------------------------TAGCACCACATGATTCGGCTT 	1355
---------------------------------------------------TAGCACCACATGATTCGGC 	4
----------------------------------------------------AGCACCACATGATTCGGCTT 	2
-----------------------------------------------------GCACCACATGATTCGGCTT 	7

Overlaps with: MNEST036567 MNEST036568
Overlaps with miRBase pre-miRNAs: dme-mir-995
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
4	Drosophila melanogaster	GSM466487_wt_total	TAGCACCACATGATTCGGCTT	GCCCGAATTATGTGGGAGCTGCG	down	2	2

Secondary structure

CTGCACCCCGCAGCCCGAATTATGTGGGAGCTGCGCCGTTTCCGTAATCCGTAGCACCACATGATTCGGCTTCGTGGTACA
------------GCCCGAATTATGTGGGAGCTGCG 	15
------------GCCCGAATTATGTGGGAGCTGCGCC 	1
-------------CCCGAATTATGTGGGAGCTGCG 	5
---------------------------------------------------TAGCACCACATGATTCGGCT 	80
---------------------------------------------------TAGCACCACATGATTCGGCTT 	1393
---------------------------------------------------TAGCACCACATGATTCGGC 	10
---------------------------------------------------TAGCACCACATGATTCGGCTTC 	2
----------------------------------------------------AGCACCACATGATTCGGCTT 	14
-----------------------------------------------------GCACCACATGATTCGGCTT 	2

Overlaps with: MNEST036567 MNEST036568
Overlaps with miRBase pre-miRNAs: dme-mir-995
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
5	Drosophila melanogaster	GSM399105-16286	TAGCACCACATGATTCGGCTT	GCCCGAATTATGTGGGAGCTGCG	down	2	2

Secondary structure

CTGCACCCCGCAGCCCGAATTATGTGGGAGCTGCGCCGTTTCCGTAATCCGTAGCACCACATGATTCGGCTTCGTGGTACA
------------GCCCGAATTATGTGGGAGCT 	1
------------GCCCGAATTATGTGGGAGCTG 	2
------------GCCCGAATTATGTGGGAGCTGC 	12
------------GCCCGAATTATGTGGGAGCTGCG 	41
-------------CCCGAATTATGTGGGAGCTGC 	3
-------------CCCGAATTATGTGGGAGCTGCG 	10
---------------------------------------------------TAGCACCACATGATTCGGCT 	38
---------------------------------------------------TAGCACCACATGATTCGGCTT 	1594
---------------------------------------------------TAGCACCACATGATTCGGCTTC 	3
----------------------------------------------------AGCACCACATGATTCGGCTT 	1
-----------------------------------------------------GCACCACATGATTCGGCTT 	5

Overlaps with: MNEST036567 MNEST036568
Overlaps with miRBase pre-miRNAs: dme-mir-995
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
6	Drosophila melanogaster	GSM360262-14327	TAGCACCACATGATTCGGCTT	GCCCGAATTATGTGGGAGCTGCG	down	2	2

Secondary structure

CTGCACCCCGCAGCCCGAATTATGTGGGAGCTGCGCCGTTTCCGTAATCCGTAGCACCACATGATTCGGCTTCGTGGTACA
------------GCCCGAATTATGTGGGAGCTGC 	12
------------GCCCGAATTATGTGGGAGCTGCG 	50
-------------CCCGAATTATGTGGGAGCTGCG 	2
---------------------------------------------------TAGCACCACATGATTCGGCT 	30
---------------------------------------------------TAGCACCACATGATTCGGCTT 	1005
---------------------------------------------------TAGCACCACATGATTCGGCTTC 	3
----------------------------------------------------AGCACCACATGATTCGGCTT 	2
-----------------------------------------------------GCACCACATGATTCGGCTT 	6

Overlaps with: MNEST036567 MNEST036568
Overlaps with miRBase pre-miRNAs: dme-mir-995
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
7	Drosophila melanogaster	GSM385822-16273	TAGCACCACATGATTCGGCTT	GCCCGAATTATGTGGGAGCTGCG	down	2	2

Secondary structure

CTGCACCCCGCAGCCCGAATTATGTGGGAGCTGCGCCGTTTCCGTAATCCGTAGCACCACATGATTCGGCTTCGTGGTACA
------------GCCCGAATTATGTGGGAGCTG 	1
------------GCCCGAATTATGTGGGAGCT 	4
------------GCCCGAATTATGTGGGAGCTGC 	8
------------GCCCGAATTATGTGGGAGCTGCG 	27
-------------CCCGAATTATGTGGGAGCTGC 	3
-------------CCCGAATTATGTGGGAGCTGCG 	11
--------------------------------------------------GTAGCACCACATGATTCGGCTT 	1
---------------------------------------------------TAGCACCACATGATTCGGCT 	154
---------------------------------------------------TAGCACCACATGATTCGGCTT 	4047
---------------------------------------------------TAGCACCACATGATTCGGC 	46
---------------------------------------------------TAGCACCACATGATTCGGCTTC 	3
----------------------------------------------------AGCACCACATGATTCGGCTT 	9
-----------------------------------------------------GCACCACATGATTCGGCTT 	3

Overlaps with: MNEST036567 MNEST036568
Overlaps with miRBase pre-miRNAs: dme-mir-995
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
8	Drosophila melanogaster	GSM360256-14324	TAGCACCACATGATTCGGCTT	GCCCGAATTATGTGGGAGCTGCG	down	2	2

Secondary structure

CTGCACCCCGCAGCCCGAATTATGTGGGAGCTGCGCCGTTTCCGTAATCCGTAGCACCACATGATTCGGCTTCGTGGTACA
------------GCCCGAATTATGTGGGAGCTGCG 	2
---------------------------------------------------TAGCACCACATGATTCGGCT 	2
---------------------------------------------------TAGCACCACATGATTCGGCTT 	28

Overlaps with: MNEST036567 MNEST036568
Overlaps with miRBase pre-miRNAs: dme-mir-995
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
9	Drosophila melanogaster	GSM466496_r2d2_homozygotes_untreated	TAGCACCACATGATTCGGCTT	GCCCGAATTATGTGGGAGCTGCG	down	2	2

Secondary structure

CTGCACCCCGCAGCCCGAATTATGTGGGAGCTGCGCCGTTTCCGTAATCCGTAGCACCACATGATTCGGCTTCGTGGTACA
------------GCCCGAATTATGTGGGAGCTG 	1
------------GCCCGAATTATGTGGGAGCTGC 	1
------------GCCCGAATTATGTGGGAGCTGCG 	9
-------------CCCGAATTATGTGGGAGCTGCG 	5
---------------------------------------------------TAGCACCACATGATTCGGCT 	93
---------------------------------------------------TAGCACCACATGATTCGGCTT 	1203
---------------------------------------------------TAGCACCACATGATTCGGC 	4
---------------------------------------------------TAGCACCACATGATTCGGCTTC 	3
----------------------------------------------------AGCACCACATGATTCGGCTT 	13
----------------------------------------------------AGCACCACATGATTCGGCT 	3

Overlaps with: MNEST036567 MNEST036568
Overlaps with miRBase pre-miRNAs: dme-mir-995
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
10	Drosophila melanogaster	GSM385821-16268	TAGCACCACATGATTCGGCTT	GCCCGAATTATGTGGGAGCTGCG	down	2	2

Secondary structure

CTGCACCCCGCAGCCCGAATTATGTGGGAGCTGCGCCGTTTCCGTAATCCGTAGCACCACATGATTCGGCTTCGTGGTACA
------------GCCCGAATTATGTGGGAGCTG 	18
-------------CCCGAATTATGTGGGAGCTGC 	2
--------------CCGAATTATGTGGGAGCTGCG 	1
---------------------------------------------------TAGCACCACATGATTCGGCTT 	17580

Overlaps with: MNEST036567 MNEST036568
Overlaps with miRBase pre-miRNAs: dme-mir-995
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
11	Drosophila melanogaster	GSM371638-15389	TAGCACCACATGATTCGGCTT	GCCCGAATTATGTGGGAGCTGCG	down	2	2

Secondary structure

CTGCACCCCGCAGCCCGAATTATGTGGGAGCTGCGCCGTTTCCGTAATCCGTAGCACCACATGATTCGGCTTCGTGGTACA
------------GCCCGAATTATGTGGGAGCTG 	24
------------GCCCGAATTATGTGGGAGCT 	1
------------GCCCGAATTATGTGGGAGCTGC 	63
------------GCCCGAATTATGTGGGAGCTGCG 	338
-------------CCCGAATTATGTGGGAGCTGC 	6
-------------CCCGAATTATGTGGGAGCTGCG 	20
-------------CCCGAATTATGTGGGAGCTGCGCCG 	1
-------------CCCGAATTATGTGGGAGCTGCGC 	3
--------------CCGAATTATGTGGGAGCTGCGC 	1
--------------------------------------------------GTAGCACCACATGATTCGGCTT 	2
---------------------------------------------------TAGCACCACATGATTCGGCT 	1271
---------------------------------------------------TAGCACCACATGATTCGGCTT 	7187
---------------------------------------------------TAGCACCACATGATTCGGC 	84
---------------------------------------------------TAGCACCACATGATTCGGCTTC 	18
----------------------------------------------------AGCACCACATGATTCGGCTT 	5
-----------------------------------------------------GCACCACATGATTCGGCTT 	1

Overlaps with: MNEST036567 MNEST036568
Overlaps with miRBase pre-miRNAs: dme-mir-995
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
12	Drosophila melanogaster	GSM286605-9793	TAGCACCACATGATTCGGCTT	GCCCGAATTATGTGGGAGCTGCG	down	2	2

Secondary structure

CTGCACCCCGCAGCCCGAATTATGTGGGAGCTGCGCCGTTTCCGTAATCCGTAGCACCACATGATTCGGCTTCGTGGTACA
-----------AGCCCGAATTATGTGGGAGCTGCG 	6
------------GCCCGAATTATGTGGGAGCT 	3
------------GCCCGAATTATGTGGGAGCTG 	36
------------GCCCGAATTATGTGGGAGCTGC 	78
------------GCCCGAATTATGTGGGAGCTGCG 	545
-------------CCCGAATTATGTGGGAGCTGC 	4
-------------CCCGAATTATGTGGGAGCTGCG 	197
-------------CCCGAATTATGTGGGAGCTGCGC 	8
--------------------------------------------------GTAGCACCACATGATTCGGCT 	1
---------------------------------------------------TAGCACCACATGATTCGGCT 	157
---------------------------------------------------TAGCACCACATGATTCGGCTT 	2590
---------------------------------------------------TAGCACCACATGATTCGGC 	1
---------------------------------------------------TAGCACCACATGATTCGGCTTC 	5
----------------------------------------------------AGCACCACATGATTCGGCT 	1
----------------------------------------------------AGCACCACATGATTCGGCTT 	3
-----------------------------------------------------GCACCACATGATTCGGCTT 	33

Overlaps with: MNEST036567 MNEST036568
Overlaps with miRBase pre-miRNAs: dme-mir-995
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
13	Drosophila melanogaster	GSM343833-15151	TAGCACCACATGATTCGGCTT	GCCCGAATTATGTGGGAGCTGCG	down	2	2

Secondary structure

CTGCACCCCGCAGCCCGAATTATGTGGGAGCTGCGCCGTTTCCGTAATCCGTAGCACCACATGATTCGGCTTCGTGGTACA
------------GCCCGAATTATGTGGGAGCTG 	7
------------GCCCGAATTATGTGGGAGCTGC 	79
------------GCCCGAATTATGTGGGAGCTGCG 	228
-------------CCCGAATTATGTGGGAGCTGC 	4
-------------CCCGAATTATGTGGGAGCTGCG 	14
-------------CCCGAATTATGTGGGAGCTGCGC 	1
---------------------------------------------------TAGCACCACATGATTCGGCT 	484
---------------------------------------------------TAGCACCACATGATTCGGCTT 	4534
---------------------------------------------------TAGCACCACATGATTCGGC 	380
---------------------------------------------------TAGCACCACATGATTCGGCTTC 	29
----------------------------------------------------AGCACCACATGATTCGGCTT 	2
-----------------------------------------------------GCACCACATGATTCGGCTT 	1

Overlaps with: MNEST036567 MNEST036568
Overlaps with miRBase pre-miRNAs: dme-mir-995
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
14	Drosophila melanogaster	GSM343832-15149	TAGCACCACATGATTCGGCTT	GCCCGAATTATGTGGGAGCTGCG	down	2	2

Secondary structure

CTGCACCCCGCAGCCCGAATTATGTGGGAGCTGCGCCGTTTCCGTAATCCGTAGCACCACATGATTCGGCTTCGTGGTACA
------------GCCCGAATTATGTGGGAGCTG 	6
------------GCCCGAATTATGTGGGAGCTGC 	82
------------GCCCGAATTATGTGGGAGCTGCG 	174
-------------CCCGAATTATGTGGGAGCTGC 	5
-------------CCCGAATTATGTGGGAGCTGCG 	13
-------------CCCGAATTATGTGGGAGCTGCGC 	2
---------------------------------------------------TAGCACCACATGATTCGGCT 	252
---------------------------------------------------TAGCACCACATGATTCGGCTT 	2404
---------------------------------------------------TAGCACCACATGATTCGGC 	544
---------------------------------------------------TAGCACCACATGATTCGGCTTC 	21
----------------------------------------------------AGCACCACATGATTCGGCT 	1
----------------------------------------------------AGCACCACATGATTCGGCTT 	1
-----------------------------------------------------GCACCACATGATTCGGCTT 	1

Overlaps with: MNEST036567 MNEST036568
Overlaps with miRBase pre-miRNAs: dme-mir-995
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
15	Drosophila melanogaster	GSM399100-5263	TAGCACCACATGATTCGGCTT	GCCCGAATTATGTGGGAGCTGCG	down	2	2

Secondary structure

CTGCACCCCGCAGCCCGAATTATGTGGGAGCTGCGCCGTTTCCGTAATCCGTAGCACCACATGATTCGGCTTCGTGGTACA
------------GCCCGAATTATGTGGGAGCTG 	19
------------GCCCGAATTATGTGGGAGCTGC 	299
------------GCCCGAATTATGTGGGAGCTGCG 	271
------------GCCCGAATTATGTGGGAGCTGCGC 	2
-------------CCCGAATTATGTGGGAGCTGC 	7
-------------CCCGAATTATGTGGGAGCTGCG 	40
-------------CCCGAATTATGTGGGAGCTGCGC 	1
--------------------------------------------------GTAGCACCACATGATTCGGCT 	1
---------------------------------------------------TAGCACCACATGATTCGGCT 	387
---------------------------------------------------TAGCACCACATGATTCGGCTT 	3516
---------------------------------------------------TAGCACCACATGATTCGGC 	68
---------------------------------------------------TAGCACCACATGATTCGGCTTC 	40
----------------------------------------------------AGCACCACATGATTCGGCTT 	3

Overlaps with: MNEST036567 MNEST036568
Overlaps with miRBase pre-miRNAs: dme-mir-995
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
16	Drosophila melanogaster	GSM360260-14326	TAGCACCACATGATTCGGCTT	GCCCGAATTATGTGGGAGCTGCG	down	2	2

Secondary structure

CTGCACCCCGCAGCCCGAATTATGTGGGAGCTGCGCCGTTTCCGTAATCCGTAGCACCACATGATTCGGCTTCGTGGTACA
------------GCCCGAATTATGTGGGAGCTGCG 	13
-------------CCCGAATTATGTGGGAGCTGCG 	6
---------------------------------------------------TAGCACCACATGATTCGGCT 	21
---------------------------------------------------TAGCACCACATGATTCGGCTT 	629
---------------------------------------------------TAGCACCACATGATTCGGCTTC 	2
----------------------------------------------------AGCACCACATGATTCGGCTT 	3
-----------------------------------------------------GCACCACATGATTCGGCTT 	1

Overlaps with: MNEST036567 MNEST036568
Overlaps with miRBase pre-miRNAs: dme-mir-995
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
17	Drosophila melanogaster	GSM322543-14323	TAGCACCACATGATTCGGCTT	GCCCGAATTATGTGGGAGCTGCG	down	2	2

Secondary structure

CTGCACCCCGCAGCCCGAATTATGTGGGAGCTGCGCCGTTTCCGTAATCCGTAGCACCACATGATTCGGCTTCGTGGTACA
------------GCCCGAATTATGTGGGAGCTGC 	13
------------GCCCGAATTATGTGGGAGCTGCG 	72
-------------CCCGAATTATGTGGGAGCTGCGCC 	6
-------------CCCGAATTATGTGGGAGCTGCG 	46
-------------CCCGAATTATGTGGGAGCTGCGC 	10
---------------------------------------------------TAGCACCACATGATTCGGCT 	92
---------------------------------------------------TAGCACCACATGATTCGGCTT 	1873
----------------------------------------------------AGCACCACATGATTCGGCT 	4
-----------------------------------------------------GCACCACATGATTCGGCTT 	7

Overlaps with: MNEST036567 MNEST036568
Overlaps with miRBase pre-miRNAs: dme-mir-995
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
18	Drosophila melanogaster	GSM286607-9796	TAGCACCACATGATTCGGCTT	GCCCGAATTATGTGGGAGCTGCG	down	2	2

Secondary structure

CTGCACCCCGCAGCCCGAATTATGTGGGAGCTGCGCCGTTTCCGTAATCCGTAGCACCACATGATTCGGCTTCGTGGTACA
------------GCCCGAATTATGTGGGAGCTG 	6
------------GCCCGAATTATGTGGGAGCTGC 	44
------------GCCCGAATTATGTGGGAGCTGCG 	330
-------------CCCGAATTATGTGGGAGCTGCGCCG 	1
-------------CCCGAATTATGTGGGAGCTGCG 	121
-------------CCCGAATTATGTGGGAGCTGCGC 	46
--------------CCGAATTATGTGGGAGCTGCG 	5
-------------------TTATGTGGGAGCTGCGCCGTTTCC 	2
--------------------------------------------------GTAGCACCACATGATTCGGCTT 	3
---------------------------------------------------TAGCACCACATGATTCGGCT 	120
---------------------------------------------------TAGCACCACATGATTCGGC 	5
---------------------------------------------------TAGCACCACATGATTCGGCTT 	2231
----------------------------------------------------AGCACCACATGATTCGGCTT 	3
-----------------------------------------------------GCACCACATGATTCGGCTT 	13

Overlaps with: MNEST036567 MNEST036568
Overlaps with miRBase pre-miRNAs: dme-mir-995
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
19	Drosophila melanogaster	GSM399101-5265	TAGCACCACATGATTCGGCTT	GCCCGAATTATGTGGGAGCTGCG	down	2	2

Secondary structure

CTGCACCCCGCAGCCCGAATTATGTGGGAGCTGCGCCGTTTCCGTAATCCGTAGCACCACATGATTCGGCTTCGTGGTACA
------------GCCCGAATTATGTGGGAGCT 	1
------------GCCCGAATTATGTGGGAGCTG 	21
------------GCCCGAATTATGTGGGAGCTGC 	135
------------GCCCGAATTATGTGGGAGCTGCG 	428
------------GCCCGAATTATGTGGGAGC 	1
-------------CCCGAATTATGTGGGAGCTGC 	9
-------------CCCGAATTATGTGGGAGCTGCG 	22
-------------CCCGAATTATGTGGGAGCTGCGC 	2
----------------GAATTATGTGGGAGCTGCG 	1
--------------------------------------------------GTAGCACCACATGATTCGGCT 	1
---------------------------------------------------TAGCACCACATGATTCGGCT 	774
---------------------------------------------------TAGCACCACATGATTCGGCTT 	8930
---------------------------------------------------TAGCACCACATGATTCGGCTTCG 	1
---------------------------------------------------TAGCACCACATGATTCGGC 	64
---------------------------------------------------TAGCACCACATGATTCGGCTTC 	166
----------------------------------------------------AGCACCACATGATTCGGCT 	1
----------------------------------------------------AGCACCACATGATTCGGCTT 	3
-----------------------------------------------------GCACCACATGATTCGGCTT 	1

Overlaps with: MNEST036567 MNEST036568
Overlaps with miRBase pre-miRNAs: dme-mir-995
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
20	Drosophila melanogaster	GSM286604-9792	TAGCACCACATGATTCGGCTT	GCCCGAATTATGTGGGAGCTGCG	down	2	2

Secondary structure

CTGCACCCCGCAGCCCGAATTATGTGGGAGCTGCGCCGTTTCCGTAATCCGTAGCACCACATGATTCGGCTTCGTGGTACA
------------GCCCGAATTATGTGGGAGCT 	1
------------GCCCGAATTATGTGGGAGCTG 	16
------------GCCCGAATTATGTGGGAGCTGC 	34
------------GCCCGAATTATGTGGGAGCTGCG 	69
-------------CCCGAATTATGTGGGAGCTGC 	6
-------------CCCGAATTATGTGGGAGCTGCG 	15
---------------------------------------------------TAGCACCACATGATTCGGCT 	130
---------------------------------------------------TAGCACCACATGATTCGGC 	5
---------------------------------------------------TAGCACCACATGATTCGGCTT 	1922
---------------------------------------------------TAGCACCACATGATTCGGCTTC 	6
----------------------------------------------------AGCACCACATGATTCGGCTT 	3

Overlaps with: MNEST036567 MNEST036568
Overlaps with miRBase pre-miRNAs: dme-mir-995
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
21	Drosophila melanogaster	GSM385744-16261	TAGCACCACATGATTCGGCTT	GCCCGAATTATGTGGGAGCTGCG	down	2	2

Secondary structure

CTGCACCCCGCAGCCCGAATTATGTGGGAGCTGCGCCGTTTCCGTAATCCGTAGCACCACATGATTCGGCTTCGTGGTACA
------------GCCCGAATTATGTGGGAGCTG 	6
------------GCCCGAATTATGTGGGAGCT 	1
------------GCCCGAATTATGTGGGAGCTGC 	12
------------GCCCGAATTATGTGGGAGCTGCG 	52
------------GCCCGAATTATGTGGGAGC 	4
-------------CCCGAATTATGTGGGAGCTGC 	2
-------------CCCGAATTATGTGGGAGCTGCG 	12
---------------------------------------------------TAGCACCACATGATTCGGCT 	272
---------------------------------------------------TAGCACCACATGATTCGGCTT 	6186
---------------------------------------------------TAGCACCACATGATTCGGC 	70
---------------------------------------------------TAGCACCACATGATTCGGCTTC 	11
----------------------------------------------------AGCACCACATGATTCGGCTT 	8
-----------------------------------------------------GCACCACATGATTCGGCTT 	4

Overlaps with: MNEST036567 MNEST036568
Overlaps with miRBase pre-miRNAs: dme-mir-995
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
22	Drosophila melanogaster	GSM322208-14317	TAGCACCACATGATTCGGCTT	GCCCGAATTATGTGGGAGCTGCG	down	2	2

Secondary structure

CTGCACCCCGCAGCCCGAATTATGTGGGAGCTGCGCCGTTTCCGTAATCCGTAGCACCACATGATTCGGCTTCGTGGTACA
------------GCCCGAATTATGTGGGAGCTG 	1
------------GCCCGAATTATGTGGGAGCTGC 	9
------------GCCCGAATTATGTGGGAGCTGCG 	11
-------------CCCGAATTATGTGGGAGCTGCG 	2
---------------------------------------------------TAGCACCACATGATTCGGCT 	28
---------------------------------------------------TAGCACCACATGATTCGGCTT 	276
---------------------------------------------------TAGCACCACATGATTCGGCTTCG 	2
---------------------------------------------------TAGCACCACATGATTCGGC 	14
---------------------------------------------------TAGCACCACATGATTCGGCTTCGT 	1
---------------------------------------------------TAGCACCACATGATTCGGCTTC 	18
----------------------------------------------------AGCACCACATGATTCGGCTT 	2
-----------------------------------------------------GCACCACATGATTCGGCTT 	8

Overlaps with: MNEST036567 MNEST036568
Overlaps with miRBase pre-miRNAs: dme-mir-995
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
23	Drosophila melanogaster	GSM385748-16264	TAGCACCACATGATTCGGCTT	GCCCGAATTATGTGGGAGCTGCG	down	2	2

Secondary structure

CTGCACCCCGCAGCCCGAATTATGTGGGAGCTGCGCCGTTTCCGTAATCCGTAGCACCACATGATTCGGCTTCGTGGTACA
------------GCCCGAATTATGTGGGAGCTG 	14
------------GCCCGAATTATGTGGGAGCTGCG 	90
------------GCCCGAATTATGTGGGAGCT 	2
------------GCCCGAATTATGTGGGAGCTGC 	24
------------GCCCGAATTATGTGGGAGC 	4
-------------CCCGAATTATGTGGGAGCTGC 	2
-------------CCCGAATTATGTGGGAGCTGCG 	20
--------------CCGAATTATGTGGGAGCTGCG 	1
---------------------------------------------------TAGCACCACATGATTCGGCTT 	12469
---------------------------------------------------TAGCACCACATGATTCGGC 	148
---------------------------------------------------TAGCACCACATGATTCGGCT 	541
---------------------------------------------------TAGCACCACATGATTCGGCTTC 	14
----------------------------------------------------AGCACCACATGATTCGGCTT 	19
----------------------------------------------------AGCACCACATGATTCGGCT 	2
-----------------------------------------------------GCACCACATGATTCGGCTT 	5

Overlaps with: MNEST036567 MNEST036568
Overlaps with miRBase pre-miRNAs: dme-mir-995
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
24	Drosophila melanogaster	GSM399110-16285	TAGCACCACATGATTCGGCTT	GCCCGAATTATGTGGGAGCTGCG	down	2	2

Secondary structure

CTGCACCCCGCAGCCCGAATTATGTGGGAGCTGCGCCGTTTCCGTAATCCGTAGCACCACATGATTCGGCTTCGTGGTACA
------------GCCCGAATTATGTGGGAGCT 	9
------------GCCCGAATTATGTGGGAGCTG 	35
------------GCCCGAATTATGTGGGAGCTGC 	219
------------GCCCGAATTATGTGGGAGCTGCG 	203
------------GCCCGAATTATGTGGGAGC 	9
-------------CCCGAATTATGTGGGAGCTGC 	17
-------------CCCGAATTATGTGGGAGCTGCG 	75
-------------CCCGAATTATGTGGGAGCTGCGC 	3
---------------------------------------------------TAGCACCACATGATTCGGCT 	594
---------------------------------------------------TAGCACCACATGATTCGGC 	14
---------------------------------------------------TAGCACCACATGATTCGGCTT 	9620
---------------------------------------------------TAGCACCACATGATTCGGCTTC 	20
----------------------------------------------------AGCACCACATGATTCGGCTT 	15
----------------------------------------------------AGCACCACATGATTCGGCT 	3
-----------------------------------------------------GCACCACATGATTCGGCTT 	59

Overlaps with: MNEST036567 MNEST036568
Overlaps with miRBase pre-miRNAs: dme-mir-995
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
25	Drosophila melanogaster	GSM466492_dcr-2_homozygotes_untreated	TAGCACCACATGATTCGGCTT	GCCCGAATTATGTGGGAGCTGCG	down	2	2

Secondary structure

CTGCACCCCGCAGCCCGAATTATGTGGGAGCTGCGCCGTTTCCGTAATCCGTAGCACCACATGATTCGGCTTCGTGGTACA
------------GCCCGAATTATGTGGGAGCTG 	1
------------GCCCGAATTATGTGGGAGCTGC 	6
------------GCCCGAATTATGTGGGAGCTGCG 	6
-------------CCCGAATTATGTGGGAGCTGCG 	2
---------------------------------------------------TAGCACCACATGATTCGGCT 	65
---------------------------------------------------TAGCACCACATGATTCGGC 	11
---------------------------------------------------TAGCACCACATGATTCGGCTT 	1232
---------------------------------------------------TAGCACCACATGATTCGGCTTC 	2
----------------------------------------------------AGCACCACATGATTCGGCT 	2
----------------------------------------------------AGCACCACATGATTCGGCTT 	17
-----------------------------------------------------GCACCACATGATTCGGCTT 	1

Overlaps with: MNEST036567 MNEST036568
Overlaps with miRBase pre-miRNAs: dme-mir-995
HuntMi prediction: true miRNA