miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: deep sequencing predictions



Please select library, species and/or miRNA sequence.


selected mature miRNA sequence: TAGCACCATGGAATTCAGCTG

selected species: Acyrthosiphon pisum



1 records found  

#specieslibrarymiRNAmiRNA*armmismatchesbulges
1 Acyrthosiphon pisum GSM502519_unique_quant TAGCACCATGGAATTCAGCTG GCTGAATTTTACGAGTGCCGCA down 5 1


Secondary structure

TGTCGGTCGTCCGCTGAATTTTACGAGTGCCGCATGTAATGTATGTCTTGTAGCACCATGGAATTCAGCTGTCGCCTGGT
-------------------------------------------------GTAGCACCATGGAATTCAGCT 	1
--------------------------------------------------TAGCACCATGGAATTCAGCTGT 	719
--------------------------------------------------TAGCACCATGGAATTCAGCTG 	4786
--------------------------------------------------TAGCACCATGGAATTCAGCT 	433
--------------------------------------------------TAGCACCATGGAATTCAGC 	88
--------------------------------------------------TAGCACCATGGAATTCAGCTGTCG 	2
---------------------------------------------------AGCACCATGGAATTCAGCTGT 	2
---------------------------------------------------AGCACCATGGAATTCAGCTG 	1
----------------------------------------------------GCACCATGGAATTCAGCTG 	1

Overlaps with: MNEST035097
Overlaps with miRBase pre-miRNAs: api-mir-998
HuntMi prediction: true miRNA