miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: deep sequencing predictions



Please select library, species and/or miRNA sequence.


selected mature miRNA sequence: TAGCCAAGAATGACTTGCCTA

selected species: Brachypodium distachyon



1 records found  

#specieslibrarymiRNAmiRNA*armmismatchesbulges
1 Brachypodium distachyon GSM506621-23192 TAGCCAAGAATGACTTGCCTA GGTGGGTCTTCTTGGCTAGC up 0 1


Secondary structure

GAGGAAGAAGAAGAAGAGGGGAAGGCCTTGCATGGAGATGGAGAGCCTCCCTTGATTTTGGTAGCCAAGAATGACTTGCCTATGCTTGCCCTCTGCTAACCAGCTAGCCATGCATGGTAACCAATGGACAAATTTCTTGTGGTTGGCGTGGTTAGTGTGGTTGCATGGGTGGGTCTTCTTGGCTAGCCAGAGCGGCTCTCATCCACCATGCCAGGCCACCCCTCTTCCAAAGGAAATAACATCCT
-------------------------------------------------------------TAGCCAAGAATGACTTGCCTA 	24
-------------------------------------------------------------TAGCCAAGAATGACTTGCCT 	12
--------------------------------------------------------------AGCCAAGAATGACTTGCCTA 	2
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------GGTGGGTCTTCTTGGCTAGCC 	3
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------GGTGGGTCTTCTTGGCTAG 	2
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------GGTGGGTCTTCTTGGCTAGC 	6
------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGGGTCTTCTTGGCTAGC 	1

Overlaps with: MNEST041756
Overlaps with miRBase pre-miRNAs: bdi-MIR169d
HuntMi prediction: true miRNA