miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: deep sequencing predictions



Please select library, species and/or miRNA sequence.


selected mature miRNA sequence: TAGCCAAGGATGATTTGCCTGT

selected species: Brachypodium distachyon



1 records found  

#specieslibrarymiRNAmiRNA*armmismatchesbulges
1 Brachypodium distachyon GSM506620-12051 TAGCCAAGGATGATTTGCCTGT GGGCAAGTCAGCCTGGCTACC up 1 1


Secondary structure

GCCATCTTTGATAGCCAAGGATGATTTGCCTGTAAAACCGATTGTCGTCGCCTCTCGGTGCCGTTCCAGGCACTCGAAGGGAGGGCGGCAGCAACAGGTTCTATGGGCAAGTCAGCCTGGCTACCCGAGTACC
-----------TAGCCAAGGATGATTTGCCTGTAAA 	3
-----------TAGCCAAGGATGATTTGCCTGTAA 	3
-----------TAGCCAAGGATGATTTGCCTGTA 	239
-----------TAGCCAAGGATGATTTGCCTGT 	257
-----------TAGCCAAGGATGATTTGCCTG 	4
-----------TAGCCAAGGATGATTTGCCT 	2
-----------TAGCCAAGGATGATTTGCC 	5
------------AGCCAAGGATGATTTGCCTGTA 	1
------------AGCCAAGGATGATTTGCCTGT 	2
-------------GCCAAGGATGATTTGCCTGTA 	2
----------------AAGGATGATTTGCCTGTAAAACCGAT 	1
------------------------------------------------------------------------------------------------------ATGGGCAAGTCAGCCTGGCTA 	2
-------------------------------------------------------------------------------------------------------TGGGCAAGTCAGCCTGGCTACC 	7
-------------------------------------------------------------------------------------------------------TGGGCAAGTCAGCCTGGCTAC 	3


Overlaps with: MNEST003057
Overlaps with miRBase pre-miRNAs: bdi-MIR169k
HuntMi prediction: true miRNA