miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: deep sequencing predictions



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selected mature miRNA sequence: TAGGAAAGTGGAAGCAGTAAGT

selected species: Mus musculus



34 records found  

#specieslibrarymiRNAmiRNA*armmismatchesbulges
1 Mus musculus GSM539838 TAGGAAAGTGGAAGCAGTAAGT TTACTGCTTCCACTTTCCTATA down 0 0


Secondary structure

GTCACGGAACCTAGAAGAGAACTTACTGCTTCCACTTTCCTATAGAATGCAGTTAGAAATTAAACTATAGGAAAGTGGAAGCAGTAAGTTCTCTTCTAGGCTCATCAC
------------------------------------------------------------------ATAGGAAAGTGGAAGCAGTA 	1
-------------------------------------------------------------------TAGGAAAGTGGAAGCAGTAAGTTC 	1
-------------------------------------------------------------------TAGGAAAGTGGAAGCAGTAAGTT 	1
-------------------------------------------------------------------TAGGAAAGTGGAAGCAGTAAGT 	14
-------------------------------------------------------------------TAGGAAAGTGGAAGCAGTAAG 	3

Overlaps with: MNEST032463
Overlaps with miRBase pre-miRNAs: mmu-mir-1958
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
2 Mus musculus GSM539838 TAGGAAAGTGGAAGCAGTAAGT TTACTGCTTCCACTTTCCTATA down 0 0


Secondary structure

AGTGATGAGCCTAGAAGAGAACTTACTGCTTCCACTTTCCTATAGTTTAATTTCTAACTGCATTCTATAGGAAAGTGGAAGCAGTAAGTTCTCTTCTAGGTTCCGTGA
---------------------------------------------------------------TCTATAGGAAAGTGGAAGCAGTA 	1
------------------------------------------------------------------ATAGGAAAGTGGAAGCAGTA 	1
-------------------------------------------------------------------TAGGAAAGTGGAAGCAGTAAGTTC 	1
-------------------------------------------------------------------TAGGAAAGTGGAAGCAGTAAGTT 	1
-------------------------------------------------------------------TAGGAAAGTGGAAGCAGTAAGT 	14
-------------------------------------------------------------------TAGGAAAGTGGAAGCAGTAAG 	3

Overlaps with: MNEST032463
Overlaps with miRBase pre-miRNAs: mmu-mir-1958
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
3 Mus musculus GSM539850 TAGGAAAGTGGAAGCAGTAAGT TTACTGCTTCCACTTTCCTATA down 0 0


Secondary structure

GTCACGGAACCTAGAAGAGAACTTACTGCTTCCACTTTCCTATAGAATGCAGTTAGAAATTAAACTATAGGAAAGTGGAAGCAGTAAGTTCTCTTCTAGGCTCATCAC
------------------------------------------------------------------ATAGGAAAGTGGAAGCAGTAA 	1
------------------------------------------------------------------ATAGGAAAGTGGAAGCAGTAAGT 	1
------------------------------------------------------------------ATAGGAAAGTGGAAGCAGTAAG 	1
-------------------------------------------------------------------TAGGAAAGTGGAAGCAGTAAGT 	81
-------------------------------------------------------------------TAGGAAAGTGGAAGCAGTAA 	5
-------------------------------------------------------------------TAGGAAAGTGGAAGCAGTAAGTTC 	1
-------------------------------------------------------------------TAGGAAAGTGGAAGCAGTAAG 	7

Overlaps with: MNEST032463
Overlaps with miRBase pre-miRNAs: mmu-mir-1958
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
4 Mus musculus GSM539850 TAGGAAAGTGGAAGCAGTAAGT TTACTGCTTCCACTTTCCTATA down 0 0


Secondary structure

AGTGATGAGCCTAGAAGAGAACTTACTGCTTCCACTTTCCTATAGTTTAATTTCTAACTGCATTCTATAGGAAAGTGGAAGCAGTAAGTTCTCTTCTAGGTTCCGTGA
------------------------------------------------------------------ATAGGAAAGTGGAAGCAGTAA 	1
------------------------------------------------------------------ATAGGAAAGTGGAAGCAGTAAGT 	1
------------------------------------------------------------------ATAGGAAAGTGGAAGCAGTAAG 	1
-------------------------------------------------------------------TAGGAAAGTGGAAGCAGTAAGT 	81
-------------------------------------------------------------------TAGGAAAGTGGAAGCAGTAA 	5
-------------------------------------------------------------------TAGGAAAGTGGAAGCAGTAAGTTC 	1
-------------------------------------------------------------------TAGGAAAGTGGAAGCAGTAAG 	7

Overlaps with: MNEST032463
Overlaps with miRBase pre-miRNAs: mmu-mir-1958
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
5 Mus musculus GSM539835 TAGGAAAGTGGAAGCAGTAAGT TTACTGCTTCCACTTTCCTATA down 0 0


Secondary structure

GTCACGGAACCTAGAAGAGAACTTACTGCTTCCACTTTCCTATAGAATGCAGTTAGAAATTAAACTATAGGAAAGTGGAAGCAGTAAGTTCTCTTCTAGGCTCATCAC
------------------------------------------------------------------ATAGGAAAGTGGAAGCAGTAA 	1
-------------------------------------------------------------------TAGGAAAGTGGAAGCAGTAA 	2
-------------------------------------------------------------------TAGGAAAGTGGAAGCAGTAAGT 	22
-------------------------------------------------------------------TAGGAAAGTGGAAGCAGTAAGTTC 	2
-------------------------------------------------------------------TAGGAAAGTGGAAGCAGTAAG 	2
-------------------------------------------------------------------TAGGAAAGTGGAAGCAGTAAGTT 	2

Overlaps with: MNEST032463
Overlaps with miRBase pre-miRNAs: mmu-mir-1958
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
6 Mus musculus GSM539835 TAGGAAAGTGGAAGCAGTAAGT TTACTGCTTCCACTTTCCTATA down 0 0


Secondary structure

AGTGATGAGCCTAGAAGAGAACTTACTGCTTCCACTTTCCTATAGTTTAATTTCTAACTGCATTCTATAGGAAAGTGGAAGCAGTAAGTTCTCTTCTAGGTTCCGTGA
------------------------------------------------------------------ATAGGAAAGTGGAAGCAGTAA 	1
-------------------------------------------------------------------TAGGAAAGTGGAAGCAGTAA 	2
-------------------------------------------------------------------TAGGAAAGTGGAAGCAGTAAGT 	22
-------------------------------------------------------------------TAGGAAAGTGGAAGCAGTAAGTTC 	2
-------------------------------------------------------------------TAGGAAAGTGGAAGCAGTAAG 	2
-------------------------------------------------------------------TAGGAAAGTGGAAGCAGTAAGTT 	2

Overlaps with: MNEST032463
Overlaps with miRBase pre-miRNAs: mmu-mir-1958
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
7 Mus musculus GSM539849 TAGGAAAGTGGAAGCAGTAAGT TTACTGCTTCCACTTTCCTATA down 0 0


Secondary structure

GTCACGGAACCTAGAAGAGAACTTACTGCTTCCACTTTCCTATAGAATGCAGTTAGAAATTAAACTATAGGAAAGTGGAAGCAGTAAGTTCTCTTCTAGGCTCATCAC
-------------------------------------------------------------------TAGGAAAGTGGAAGCAGTAAGT 	5
-------------------------------------------------------------------TAGGAAAGTGGAAGCAGTAAG 	1
-------------------------------------------------------------------TAGGAAAGTGGAAGCAGTA 	1

Overlaps with: MNEST032463
Overlaps with miRBase pre-miRNAs: mmu-mir-1958
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
8 Mus musculus GSM539849 TAGGAAAGTGGAAGCAGTAAGT TTACTGCTTCCACTTTCCTATA down 0 0


Secondary structure

AGTGATGAGCCTAGAAGAGAACTTACTGCTTCCACTTTCCTATAGTTTAATTTCTAACTGCATTCTATAGGAAAGTGGAAGCAGTAAGTTCTCTTCTAGGTTCCGTGA
-------------------------------------------------------------------TAGGAAAGTGGAAGCAGTAAGT 	5
-------------------------------------------------------------------TAGGAAAGTGGAAGCAGTAAG 	1
-------------------------------------------------------------------TAGGAAAGTGGAAGCAGTA 	1

Overlaps with: MNEST032463
Overlaps with miRBase pre-miRNAs: mmu-mir-1958
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
9 Mus musculus GSM539848 TAGGAAAGTGGAAGCAGTAAGT TTACTGCTTCCACTTTCCTATA down 0 0


Secondary structure

GTCACGGAACCTAGAAGAGAACTTACTGCTTCCACTTTCCTATAGAATGCAGTTAGAAATTAAACTATAGGAAAGTGGAAGCAGTAAGTTCTCTTCTAGGCTCATCAC
------------------------------------------------------------------ATAGGAAAGTGGAAGCAGTAAG 	1
-------------------------------------------------------------------TAGGAAAGTGGAAGCAGTAAGT 	17
-------------------------------------------------------------------TAGGAAAGTGGAAGCAGTAAG 	3
-------------------------------------------------------------------TAGGAAAGTGGAAGCAGTAAGTTC 	1

Overlaps with: MNEST032463
Overlaps with miRBase pre-miRNAs: mmu-mir-1958
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
10 Mus musculus GSM539848 TAGGAAAGTGGAAGCAGTAAGT TTACTGCTTCCACTTTCCTATA down 0 0


Secondary structure

AGTGATGAGCCTAGAAGAGAACTTACTGCTTCCACTTTCCTATAGTTTAATTTCTAACTGCATTCTATAGGAAAGTGGAAGCAGTAAGTTCTCTTCTAGGTTCCGTGA
------------------------------------------------------------------ATAGGAAAGTGGAAGCAGTAAG 	1
-------------------------------------------------------------------TAGGAAAGTGGAAGCAGTAAGT 	17
-------------------------------------------------------------------TAGGAAAGTGGAAGCAGTAAG 	3
-------------------------------------------------------------------TAGGAAAGTGGAAGCAGTAAGTTC 	1

Overlaps with: MNEST032463
Overlaps with miRBase pre-miRNAs: mmu-mir-1958
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
11 Mus musculus GSM539864 TAGGAAAGTGGAAGCAGTAAGT TTACTGCTTCCACTTTCCTATA down 0 0


Secondary structure

GTCACGGAACCTAGAAGAGAACTTACTGCTTCCACTTTCCTATAGAATGCAGTTAGAAATTAAACTATAGGAAAGTGGAAGCAGTAAGTTCTCTTCTAGGCTCATCAC
------------------------------------------------------------------ATAGGAAAGTGGAAGCAGTAA 	1
------------------------------------------------------------------ATAGGAAAGTGGAAGCAGT 	1
-------------------------------------------------------------------TAGGAAAGTGGAAGCAGTAAGT 	20
-------------------------------------------------------------------TAGGAAAGTGGAAGCAGTAAG 	2

Overlaps with: MNEST032463
Overlaps with miRBase pre-miRNAs: mmu-mir-1958
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
12 Mus musculus GSM539864 TAGGAAAGTGGAAGCAGTAAGT TTACTGCTTCCACTTTCCTATA down 0 0


Secondary structure

AGTGATGAGCCTAGAAGAGAACTTACTGCTTCCACTTTCCTATAGTTTAATTTCTAACTGCATTCTATAGGAAAGTGGAAGCAGTAAGTTCTCTTCTAGGTTCCGTGA
------------------------------------------------------------------ATAGGAAAGTGGAAGCAGTAA 	1
------------------------------------------------------------------ATAGGAAAGTGGAAGCAGT 	1
-------------------------------------------------------------------TAGGAAAGTGGAAGCAGTAAGT 	20
-------------------------------------------------------------------TAGGAAAGTGGAAGCAGTAAG 	2

Overlaps with: MNEST032463
Overlaps with miRBase pre-miRNAs: mmu-mir-1958
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
13 Mus musculus GSM539872 TAGGAAAGTGGAAGCAGTAAGT TTACTGCTTCCACTTTCCTATA down 0 0


Secondary structure

GTCACGGAACCTAGAAGAGAACTTACTGCTTCCACTTTCCTATAGAATGCAGTTAGAAATTAAACTATAGGAAAGTGGAAGCAGTAAGTTCTCTTCTAGGCTCATCAC
-------------------------------------------------------------------TAGGAAAGTGGAAGCAGTAAGT 	5

Overlaps with: MNEST032463
Overlaps with miRBase pre-miRNAs: mmu-mir-1958
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
14 Mus musculus GSM539872 TAGGAAAGTGGAAGCAGTAAGT TTACTGCTTCCACTTTCCTATA down 0 0


Secondary structure

AGTGATGAGCCTAGAAGAGAACTTACTGCTTCCACTTTCCTATAGTTTAATTTCTAACTGCATTCTATAGGAAAGTGGAAGCAGTAAGTTCTCTTCTAGGTTCCGTGA
-------------------------------------------------------------------TAGGAAAGTGGAAGCAGTAAGT 	5

Overlaps with: MNEST032463
Overlaps with miRBase pre-miRNAs: mmu-mir-1958
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
15 Mus musculus GSM539861 TAGGAAAGTGGAAGCAGTAAGT TTACTGCTTCCACTTTCCTATA down 0 0


Secondary structure

GTCACGGAACCTAGAAGAGAACTTACTGCTTCCACTTTCCTATAGAATGCAGTTAGAAATTAAACTATAGGAAAGTGGAAGCAGTAAGTTCTCTTCTAGGCTCATCAC
------------------------------------------------------------------ATAGGAAAGTGGAAGCAGTAA 	2
------------------------------------------------------------------ATAGGAAAGTGGAAGCAGTA 	1
-------------------------------------------------------------------TAGGAAAGTGGAAGCAGTAAGTTC 	1
-------------------------------------------------------------------TAGGAAAGTGGAAGCAGTAAGT 	40
-------------------------------------------------------------------TAGGAAAGTGGAAGCAGTAAG 	7
-------------------------------------------------------------------TAGGAAAGTGGAAGCAGTAA 	3

Overlaps with: MNEST032463
Overlaps with miRBase pre-miRNAs: mmu-mir-1958
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
16 Mus musculus GSM539861 TAGGAAAGTGGAAGCAGTAAGT TTACTGCTTCCACTTTCCTATA down 0 0


Secondary structure

AGTGATGAGCCTAGAAGAGAACTTACTGCTTCCACTTTCCTATAGTTTAATTTCTAACTGCATTCTATAGGAAAGTGGAAGCAGTAAGTTCTCTTCTAGGTTCCGTGA
------------------------------------------------------------------ATAGGAAAGTGGAAGCAGTAA 	2
------------------------------------------------------------------ATAGGAAAGTGGAAGCAGTA 	1
-------------------------------------------------------------------TAGGAAAGTGGAAGCAGTAAGTTC 	1
-------------------------------------------------------------------TAGGAAAGTGGAAGCAGTAAGT 	40
-------------------------------------------------------------------TAGGAAAGTGGAAGCAGTAAG 	7
-------------------------------------------------------------------TAGGAAAGTGGAAGCAGTAA 	3

Overlaps with: MNEST032463
Overlaps with miRBase pre-miRNAs: mmu-mir-1958
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
17 Mus musculus GSM539847 TAGGAAAGTGGAAGCAGTAAGT TTACTGCTTCCACTTTCCTATA down 0 0


Secondary structure

GTCACGGAACCTAGAAGAGAACTTACTGCTTCCACTTTCCTATAGAATGCAGTTAGAAATTAAACTATAGGAAAGTGGAAGCAGTAAGTTCTCTTCTAGGCTCATCAC
------------------------------------------------------------------ATAGGAAAGTGGAAGCAGTAAGT 	1
------------------------------------------------------------------ATAGGAAAGTGGAAGCAGTA 	1
-------------------------------------------------------------------TAGGAAAGTGGAAGCAGTAAGT 	34
-------------------------------------------------------------------TAGGAAAGTGGAAGCAGTAA 	7
-------------------------------------------------------------------TAGGAAAGTGGAAGCAGTA 	2
-------------------------------------------------------------------TAGGAAAGTGGAAGCAGTAAGTTC 	3
-------------------------------------------------------------------TAGGAAAGTGGAAGCAGTAAG 	13

Overlaps with: MNEST032463
Overlaps with miRBase pre-miRNAs: mmu-mir-1958
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
18 Mus musculus GSM539847 TAGGAAAGTGGAAGCAGTAAGT TTACTGCTTCCACTTTCCTATA down 0 0


Secondary structure

AGTGATGAGCCTAGAAGAGAACTTACTGCTTCCACTTTCCTATAGTTTAATTTCTAACTGCATTCTATAGGAAAGTGGAAGCAGTAAGTTCTCTTCTAGGTTCCGTGA
------------------------------------------------------------------ATAGGAAAGTGGAAGCAGTAAGT 	1
------------------------------------------------------------------ATAGGAAAGTGGAAGCAGTA 	1
-------------------------------------------------------------------TAGGAAAGTGGAAGCAGTAAGT 	34
-------------------------------------------------------------------TAGGAAAGTGGAAGCAGTAA 	7
-------------------------------------------------------------------TAGGAAAGTGGAAGCAGTA 	2
-------------------------------------------------------------------TAGGAAAGTGGAAGCAGTAAGTTC 	3
-------------------------------------------------------------------TAGGAAAGTGGAAGCAGTAAG 	13

Overlaps with: MNEST032463
Overlaps with miRBase pre-miRNAs: mmu-mir-1958
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
19 Mus musculus GSM539853 TAGGAAAGTGGAAGCAGTAAGT TTACTGCTTCCACTTTCCTATA down 0 0


Secondary structure

GTCACGGAACCTAGAAGAGAACTTACTGCTTCCACTTTCCTATAGAATGCAGTTAGAAATTAAACTATAGGAAAGTGGAAGCAGTAAGTTCTCTTCTAGGCTCATCAC
-------------------------------------------------------------------TAGGAAAGTGGAAGCAGTAAGT 	10
-------------------------------------------------------------------TAGGAAAGTGGAAGCAGTAAG 	1

Overlaps with: MNEST032463
Overlaps with miRBase pre-miRNAs: mmu-mir-1958
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
20 Mus musculus GSM539853 TAGGAAAGTGGAAGCAGTAAGT TTACTGCTTCCACTTTCCTATA down 0 0


Secondary structure

AGTGATGAGCCTAGAAGAGAACTTACTGCTTCCACTTTCCTATAGTTTAATTTCTAACTGCATTCTATAGGAAAGTGGAAGCAGTAAGTTCTCTTCTAGGTTCCGTGA
-------------------------------------------------------------------TAGGAAAGTGGAAGCAGTAAGT 	10
-------------------------------------------------------------------TAGGAAAGTGGAAGCAGTAAG 	1

Overlaps with: MNEST032463
Overlaps with miRBase pre-miRNAs: mmu-mir-1958
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
21 Mus musculus GSM539871 TAGGAAAGTGGAAGCAGTAAGT TTACTGCTTCCACTTTCCTATA down 0 0


Secondary structure

GTCACGGAACCTAGAAGAGAACTTACTGCTTCCACTTTCCTATAGAATGCAGTTAGAAATTAAACTATAGGAAAGTGGAAGCAGTAAGTTCTCTTCTAGGCTCATCAC
-------------------------------------------------------------------TAGGAAAGTGGAAGCAGTAAGTT 	1
-------------------------------------------------------------------TAGGAAAGTGGAAGCAGTAAGT 	5
-------------------------------------------------------------------TAGGAAAGTGGAAGCAGTAA 	1

Overlaps with: MNEST032463
Overlaps with miRBase pre-miRNAs: mmu-mir-1958
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
22 Mus musculus GSM539871 TAGGAAAGTGGAAGCAGTAAGT TTACTGCTTCCACTTTCCTATA down 0 0


Secondary structure

AGTGATGAGCCTAGAAGAGAACTTACTGCTTCCACTTTCCTATAGTTTAATTTCTAACTGCATTCTATAGGAAAGTGGAAGCAGTAAGTTCTCTTCTAGGTTCCGTGA
-------------------------------------------------------------------TAGGAAAGTGGAAGCAGTAAGTT 	1
-------------------------------------------------------------------TAGGAAAGTGGAAGCAGTAAGT 	5
-------------------------------------------------------------------TAGGAAAGTGGAAGCAGTAA 	1

Overlaps with: MNEST032463
Overlaps with miRBase pre-miRNAs: mmu-mir-1958
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
23 Mus musculus GSM539873 TAGGAAAGTGGAAGCAGTAAGT TTACTGCTTCCACTTTCCTATA down 0 0


Secondary structure

GTCACGGAACCTAGAAGAGAACTTACTGCTTCCACTTTCCTATAGAATGCAGTTAGAAATTAAACTATAGGAAAGTGGAAGCAGTAAGTTCTCTTCTAGGCTCATCAC
-------------------------------------------------------------------TAGGAAAGTGGAAGCAGTAAGT 	9
-------------------------------------------------------------------TAGGAAAGTGGAAGCAGTAAG 	1
--------------------------------------------------------------------AGGAAAGTGGAAGCAGTAAGT 	1

Overlaps with: MNEST032463
Overlaps with miRBase pre-miRNAs: mmu-mir-1958
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
24 Mus musculus GSM539873 TAGGAAAGTGGAAGCAGTAAGT TTACTGCTTCCACTTTCCTATA down 0 0


Secondary structure

AGTGATGAGCCTAGAAGAGAACTTACTGCTTCCACTTTCCTATAGTTTAATTTCTAACTGCATTCTATAGGAAAGTGGAAGCAGTAAGTTCTCTTCTAGGTTCCGTGA
-------------------------------------------------------------------TAGGAAAGTGGAAGCAGTAAGT 	9
-------------------------------------------------------------------TAGGAAAGTGGAAGCAGTAAG 	1
--------------------------------------------------------------------AGGAAAGTGGAAGCAGTAAGT 	1

Overlaps with: MNEST032463
Overlaps with miRBase pre-miRNAs: mmu-mir-1958
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
25 Mus musculus GSM539875 TAGGAAAGTGGAAGCAGTAAGT TTACTGCTTCCACTTTCCTATA down 0 0


Secondary structure

GTCACGGAACCTAGAAGAGAACTTACTGCTTCCACTTTCCTATAGAATGCAGTTAGAAATTAAACTATAGGAAAGTGGAAGCAGTAAGTTCTCTTCTAGGCTCATCAC
------------------------------------------------------------------ATAGGAAAGTGGAAGCAGTAA 	1
-------------------------------------------------------------------TAGGAAAGTGGAAGCAGTAAGT 	5
-------------------------------------------------------------------TAGGAAAGTGGAAGCAGTAA 	2

Overlaps with: MNEST032463
Overlaps with miRBase pre-miRNAs: mmu-mir-1958
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
26 Mus musculus GSM539875 TAGGAAAGTGGAAGCAGTAAGT TTACTGCTTCCACTTTCCTATA down 0 0


Secondary structure

AGTGATGAGCCTAGAAGAGAACTTACTGCTTCCACTTTCCTATAGTTTAATTTCTAACTGCATTCTATAGGAAAGTGGAAGCAGTAAGTTCTCTTCTAGGTTCCGTGA
------------------------------------------------------------------ATAGGAAAGTGGAAGCAGTAA 	1
-------------------------------------------------------------------TAGGAAAGTGGAAGCAGTAAGT 	5
-------------------------------------------------------------------TAGGAAAGTGGAAGCAGTAA 	2

Overlaps with: MNEST032463
Overlaps with miRBase pre-miRNAs: mmu-mir-1958
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
27 Mus musculus GSM539857 TAGGAAAGTGGAAGCAGTAAGT TTACTGCTTCCACTTTCCTATA down 0 0


Secondary structure

GTCACGGAACCTAGAAGAGAACTTACTGCTTCCACTTTCCTATAGAATGCAGTTAGAAATTAAACTATAGGAAAGTGGAAGCAGTAAGTTCTCTTCTAGGCTCATCAC
------------------------------------------------------------------ATAGGAAAGTGGAAGCAGTAAG 	1
------------------------------------------------------------------ATAGGAAAGTGGAAGCAGTAA 	1
-------------------------------------------------------------------TAGGAAAGTGGAAGCAGTAAGTTC 	1
-------------------------------------------------------------------TAGGAAAGTGGAAGCAGTAAGT 	45
-------------------------------------------------------------------TAGGAAAGTGGAAGCAGTAAG 	8
-------------------------------------------------------------------TAGGAAAGTGGAAGCAGTAA 	5

Overlaps with: MNEST032463
Overlaps with miRBase pre-miRNAs: mmu-mir-1958
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
28 Mus musculus GSM539857 TAGGAAAGTGGAAGCAGTAAGT TTACTGCTTCCACTTTCCTATA down 0 0


Secondary structure

AGTGATGAGCCTAGAAGAGAACTTACTGCTTCCACTTTCCTATAGTTTAATTTCTAACTGCATTCTATAGGAAAGTGGAAGCAGTAAGTTCTCTTCTAGGTTCCGTGA
------------------------------------------------------------------ATAGGAAAGTGGAAGCAGTAAG 	1
------------------------------------------------------------------ATAGGAAAGTGGAAGCAGTAA 	1
-------------------------------------------------------------------TAGGAAAGTGGAAGCAGTAAGTTC 	1
-------------------------------------------------------------------TAGGAAAGTGGAAGCAGTAAGT 	45
-------------------------------------------------------------------TAGGAAAGTGGAAGCAGTAAG 	8
-------------------------------------------------------------------TAGGAAAGTGGAAGCAGTAA 	5

Overlaps with: MNEST032463
Overlaps with miRBase pre-miRNAs: mmu-mir-1958
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
29 Mus musculus GSM539867 TAGGAAAGTGGAAGCAGTAAGT TTACTGCTTCCACTTTCCTATA down 0 0


Secondary structure

GTCACGGAACCTAGAAGAGAACTTACTGCTTCCACTTTCCTATAGAATGCAGTTAGAAATTAAACTATAGGAAAGTGGAAGCAGTAAGTTCTCTTCTAGGCTCATCAC
------------------------------------------------------------------ATAGGAAAGTGGAAGCAGTAAG 	1
------------------------------------------------------------------ATAGGAAAGTGGAAGCAGTAA 	1
-------------------------------------------------------------------TAGGAAAGTGGAAGCAGTAAGT 	10
-------------------------------------------------------------------TAGGAAAGTGGAAGCAGTAAG 	1

Overlaps with: MNEST032463
Overlaps with miRBase pre-miRNAs: mmu-mir-1958
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
30 Mus musculus GSM539867 TAGGAAAGTGGAAGCAGTAAGT TTACTGCTTCCACTTTCCTATA down 0 0


Secondary structure

AGTGATGAGCCTAGAAGAGAACTTACTGCTTCCACTTTCCTATAGTTTAATTTCTAACTGCATTCTATAGGAAAGTGGAAGCAGTAAGTTCTCTTCTAGGTTCCGTGA
------------------------------------------------------------------ATAGGAAAGTGGAAGCAGTAAG 	1
------------------------------------------------------------------ATAGGAAAGTGGAAGCAGTAA 	1
-------------------------------------------------------------------TAGGAAAGTGGAAGCAGTAAGT 	10
-------------------------------------------------------------------TAGGAAAGTGGAAGCAGTAAG 	1

Overlaps with: MNEST032463
Overlaps with miRBase pre-miRNAs: mmu-mir-1958
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
31 Mus musculus GSM539876 TAGGAAAGTGGAAGCAGTAAGT TTACTGCTTCCACTTTCCTATA down 0 0


Secondary structure

GTCACGGAACCTAGAAGAGAACTTACTGCTTCCACTTTCCTATAGAATGCAGTTAGAAATTAAACTATAGGAAAGTGGAAGCAGTAAGTTCTCTTCTAGGCTCATCAC
-------------------------------------------------------------------TAGGAAAGTGGAAGCAGTAAGTTC 	2
-------------------------------------------------------------------TAGGAAAGTGGAAGCAGTAAGT 	10
-------------------------------------------------------------------TAGGAAAGTGGAAGCAGTAA 	2

Overlaps with: MNEST032463
Overlaps with miRBase pre-miRNAs: mmu-mir-1958
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
32 Mus musculus GSM539876 TAGGAAAGTGGAAGCAGTAAGT TTACTGCTTCCACTTTCCTATA down 0 0


Secondary structure

AGTGATGAGCCTAGAAGAGAACTTACTGCTTCCACTTTCCTATAGTTTAATTTCTAACTGCATTCTATAGGAAAGTGGAAGCAGTAAGTTCTCTTCTAGGTTCCGTGA
-------------------------------------------------------------------TAGGAAAGTGGAAGCAGTAAGTTC 	2
-------------------------------------------------------------------TAGGAAAGTGGAAGCAGTAAGT 	10
-------------------------------------------------------------------TAGGAAAGTGGAAGCAGTAA 	2

Overlaps with: MNEST032463
Overlaps with miRBase pre-miRNAs: mmu-mir-1958
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
33 Mus musculus GSM539854 TAGGAAAGTGGAAGCAGTAAGT TTACTGCTTCCACTTTCCTATA down 0 0


Secondary structure

GTCACGGAACCTAGAAGAGAACTTACTGCTTCCACTTTCCTATAGAATGCAGTTAGAAATTAAACTATAGGAAAGTGGAAGCAGTAAGTTCTCTTCTAGGCTCATCAC
-------------------------------------------------------------------TAGGAAAGTGGAAGCAGTAAGT 	6
-------------------------------------------------------------------TAGGAAAGTGGAAGCAGTAAG 	1
-------------------------------------------------------------------TAGGAAAGTGGAAGCAGTAA 	1

Overlaps with: MNEST032463
Overlaps with miRBase pre-miRNAs: mmu-mir-1958
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
34 Mus musculus GSM539854 TAGGAAAGTGGAAGCAGTAAGT TTACTGCTTCCACTTTCCTATA down 0 0


Secondary structure

AGTGATGAGCCTAGAAGAGAACTTACTGCTTCCACTTTCCTATAGTTTAATTTCTAACTGCATTCTATAGGAAAGTGGAAGCAGTAAGTTCTCTTCTAGGTTCCGTGA
-------------------------------------------------------------------TAGGAAAGTGGAAGCAGTAAGT 	6
-------------------------------------------------------------------TAGGAAAGTGGAAGCAGTAAG 	1
-------------------------------------------------------------------TAGGAAAGTGGAAGCAGTAA 	1

Overlaps with: MNEST032463
Overlaps with miRBase pre-miRNAs: mmu-mir-1958
HuntMi prediction: true miRNA