miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: deep sequencing predictions



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selected mature miRNA sequence: TAGGAACTTCATACCGTGCTCT

selected species: Drosophila melanogaster



18 records found  

#specieslibrarymiRNAmiRNA*armmismatchesbulges
1 Drosophila melanogaster GSM399107-16288 TAGGAACTTCATACCGTGCTCT AGCGAGGTATAGAGTTCCTACG down 4 0


Secondary structure

TTTTTACCTGGTTTTTGCCATCAGCGAGGTATAGAGTTCCTACGTTCATTATAAACTCGTAGGAACTTCATACCGTGCTCTTGGAAGACCAAAAAACAAC
----------------------AGCGAGGTATAGAGTTCCTACG 	17149
----------------------AGCGAGGTATAGAGTTCCTACGTTC 	1
----------------------AGCGAGGTATAGAGTTCCTACGTT 	28
----------------------AGCGAGGTATAGAGTTCCTA 	612
----------------------AGCGAGGTATAGAGTTCCTAC 	2033
----------------------AGCGAGGTATAGAGTTCCT 	48
----------------------AGCGAGGTATAGAGTTCCTACGT 	222
-----------------------GCGAGGTATAGAGTTCCTACGT 	2
-----------------------GCGAGGTATAGAGTTCCTACG 	482
-----------------------GCGAGGTATAGAGTTCCTA 	5
-----------------------GCGAGGTATAGAGTTCCTAC 	17
------------------------CGAGGTATAGAGTTCCTACG 	66
-------------------------GAGGTATAGAGTTCCTACG 	14
-----------------------------------------------------------TAGGAACTTCATACCGTGCTCTT 	783
-----------------------------------------------------------TAGGAACTTCATACCGTGC 	36
-----------------------------------------------------------TAGGAACTTCATACCGTGCTC 	3106
-----------------------------------------------------------TAGGAACTTCATACCGTGCTCT 	62858
-----------------------------------------------------------TAGGAACTTCATACCGTGCT 	647
------------------------------------------------------------AGGAACTTCATACCGTGCT 	4
------------------------------------------------------------AGGAACTTCATACCGTGCTCTT 	6
------------------------------------------------------------AGGAACTTCATACCGTGCTCT 	112
------------------------------------------------------------AGGAACTTCATACCGTGCTC 	2
-------------------------------------------------------------GGAACTTCATACCGTGCTC 	24
-------------------------------------------------------------GGAACTTCATACCGTGCTCT 	456
-------------------------------------------------------------GGAACTTCATACCGTGCTCTT 	6
--------------------------------------------------------------GAACTTCATACCGTGCTCT 	3


Overlaps with: MNEST036195 MNEST037155 MNEST037233 MNEST037524
Overlaps with miRBase pre-miRNAs: dse-mir-276a dya-mir-276a dsi-mir-276a der-mir-276a
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
2 Drosophila melanogaster GSM399106-16287 TAGGAACTTCATACCGTGCTCT AGCGAGGTATAGAGTTCCTACG down 4 0


Secondary structure

TTTTTACCTGGTTTTTGCCATCAGCGAGGTATAGAGTTCCTACGTTCATTATAAACTCGTAGGAACTTCATACCGTGCTCTTGGAAGACCAAAAAACAAC
----------------------AGCGAGGTATAGAGTTCCTACGTT 	14
----------------------AGCGAGGTATAGAGTTCCTA 	176
----------------------AGCGAGGTATAGAGTTCCTAC 	879
----------------------AGCGAGGTATAGAGTTCCTACGT 	108
----------------------AGCGAGGTATAGAGTTCCTACG 	8633
----------------------AGCGAGGTATAGAGTTCCTACGTTC 	1
----------------------AGCGAGGTATAGAGTTCCT 	15
-----------------------GCGAGGTATAGAGTTCCTACG 	359
-----------------------GCGAGGTATAGAGTTCCTAC 	18
-----------------------GCGAGGTATAGAGTTCCTA 	5
------------------------CGAGGTATAGAGTTCCTACGTTC 	1
------------------------CGAGGTATAGAGTTCCTACG 	39
------------------------CGAGGTATAGAGTTCCTAC 	1
-------------------------GAGGTATAGAGTTCCTACG 	5
----------------------------------------------------------GTAGGAACTTCATACCGTGCTCT 	1
-----------------------------------------------------------TAGGAACTTCATACCGTGC 	7
-----------------------------------------------------------TAGGAACTTCATACCGTGCTCT 	17091
-----------------------------------------------------------TAGGAACTTCATACCGTGCTCTT 	210
-----------------------------------------------------------TAGGAACTTCATACCGTGCTCTTG 	1
-----------------------------------------------------------TAGGAACTTCATACCGTGCTC 	1085
-----------------------------------------------------------TAGGAACTTCATACCGTGCT 	230
------------------------------------------------------------AGGAACTTCATACCGTGCTCTT 	2
------------------------------------------------------------AGGAACTTCATACCGTGCTCT 	31
-------------------------------------------------------------GGAACTTCATACCGTGCTCT 	113
-------------------------------------------------------------GGAACTTCATACCGTGCTCTT 	3
-------------------------------------------------------------GGAACTTCATACCGTGCTC 	11
--------------------------------------------------------------GAACTTCATACCGTGCTCT 	2


Overlaps with: MNEST036195 MNEST037155 MNEST037233 MNEST037524
Overlaps with miRBase pre-miRNAs: dse-mir-276a dya-mir-276a dsi-mir-276a der-mir-276a
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
3 Drosophila melanogaster GSM466487_wt_total TAGGAACTTCATACCGTGCTCT AGCGAGGTATAGAGTTCCTACG down 4 0


Secondary structure

TTTTTACCTGGTTTTTGCCATCAGCGAGGTATAGAGTTCCTACGTTCATTATAAACTCGTAGGAACTTCATACCGTGCTCTTGGAAGACCAAAAAACAAC
---------------------CAGCGAGGTATAGAGTTCCTAC 	1
----------------------AGCGAGGTATAGAGTTCCTACGTT 	8
----------------------AGCGAGGTATAGAGTTCCTAC 	475
----------------------AGCGAGGTATAGAGTTCCTACGT 	74
----------------------AGCGAGGTATAGAGTTCCTA 	252
----------------------AGCGAGGTATAGAGTTCCTACG 	1005
----------------------AGCGAGGTATAGAGTTCCT 	128
-----------------------GCGAGGTATAGAGTTCCTACGTT 	1
-----------------------GCGAGGTATAGAGTTCCTA 	5
-----------------------GCGAGGTATAGAGTTCCTACG 	22
-----------------------GCGAGGTATAGAGTTCCTAC 	8
------------------------CGAGGTATAGAGTTCCTACG 	17
------------------------CGAGGTATAGAGTTCCTAC 	3
-------------------------GAGGTATAGAGTTCCTACG 	3
-------------------------------------------------------CTCGTAGGAACTTCATACCGTG 	1
----------------------------------------------------------GTAGGAACTTCATACCGTGCTC 	1
----------------------------------------------------------GTAGGAACTTCATACCGTGCT 	1
-----------------------------------------------------------TAGGAACTTCATACCGTGC 	21
-----------------------------------------------------------TAGGAACTTCATACCGTGCTCT 	168841
-----------------------------------------------------------TAGGAACTTCATACCGTGCT 	1050
-----------------------------------------------------------TAGGAACTTCATACCGTGCTCTTGG 	1
-----------------------------------------------------------TAGGAACTTCATACCGTGCTCTT 	3077
-----------------------------------------------------------TAGGAACTTCATACCGTGCTCTTG 	8
-----------------------------------------------------------TAGGAACTTCATACCGTGCTC 	9187
------------------------------------------------------------AGGAACTTCATACCGTGCT 	11
------------------------------------------------------------AGGAACTTCATACCGTGCTCTT 	38
------------------------------------------------------------AGGAACTTCATACCGTGCTCT 	2059
------------------------------------------------------------AGGAACTTCATACCGTGCTC 	130
-------------------------------------------------------------GGAACTTCATACCGTGCTCTT 	1
-------------------------------------------------------------GGAACTTCATACCGTGCTC 	8
-------------------------------------------------------------GGAACTTCATACCGTGCTCT 	88
--------------------------------------------------------------GAACTTCATACCGTGCTCT 	34


Overlaps with: MNEST036195 MNEST037155 MNEST037233 MNEST037524
Overlaps with miRBase pre-miRNAs: dse-mir-276a dya-mir-276a dsi-mir-276a der-mir-276a
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
4 Drosophila melanogaster GSM399105-16286 TAGGAACTTCATACCGTGCTCT AGCGAGGTATAGAGTTCCTACG down 4 0


Secondary structure

TTTTTACCTGGTTTTTGCCATCAGCGAGGTATAGAGTTCCTACGTTCATTATAAACTCGTAGGAACTTCATACCGTGCTCTTGGAAGACCAAAAAACAAC
----------------------AGCGAGGTATAGAGTTCCTACG 	5613
----------------------AGCGAGGTATAGAGTTCCTACGTT 	4
----------------------AGCGAGGTATAGAGTTCCTA 	15
----------------------AGCGAGGTATAGAGTTCCTAC 	196
----------------------AGCGAGGTATAGAGTTCCTACGT 	13
-----------------------GCGAGGTATAGAGTTCCTACGT 	1
-----------------------GCGAGGTATAGAGTTCCTACG 	330
-----------------------GCGAGGTATAGAGTTCCTAC 	5
------------------------CGAGGTATAGAGTTCCTACG 	9
-------------------------GAGGTATAGAGTTCCTACG 	4
---------------------------------------------------------CGTAGGAACTTCATACCGTGCT 	1
-----------------------------------------------------------TAGGAACTTCATACCGTGCTCTT 	41
-----------------------------------------------------------TAGGAACTTCATACCGTGC 	4
-----------------------------------------------------------TAGGAACTTCATACCGTGCTC 	241
-----------------------------------------------------------TAGGAACTTCATACCGTGCTCT 	14148
-----------------------------------------------------------TAGGAACTTCATACCGTGCT 	51
------------------------------------------------------------AGGAACTTCATACCGTGCTCTT 	2
------------------------------------------------------------AGGAACTTCATACCGTGCTCT 	29
-------------------------------------------------------------GGAACTTCATACCGTGCTC 	3
-------------------------------------------------------------GGAACTTCATACCGTGCTCT 	133
--------------------------------------------------------------GAACTTCATACCGTGCTCT 	3


Overlaps with: MNEST036195 MNEST037155 MNEST037233 MNEST037524
Overlaps with miRBase pre-miRNAs: dse-mir-276a dya-mir-276a dsi-mir-276a der-mir-276a
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
5 Drosophila melanogaster GSM360262-14327 TAGGAACTTCATACCGTGCTCT AGCGAGGTATAGAGTTCCTACG down 4 0


Secondary structure

TTTTTACCTGGTTTTTGCCATCAGCGAGGTATAGAGTTCCTACGTTCATTATAAACTCGTAGGAACTTCATACCGTGCTCTTGGAAGACCAAAAAACAAC
----------------------AGCGAGGTATAGAGTTCCTACG 	19480
----------------------AGCGAGGTATAGAGTTCCTACGTTC 	1
----------------------AGCGAGGTATAGAGTTCCTACGTT 	3
----------------------AGCGAGGTATAGAGTTCCTA 	180
----------------------AGCGAGGTATAGAGTTCCTAC 	1334
----------------------AGCGAGGTATAGAGTTCCT 	17
----------------------AGCGAGGTATAGAGTTCCTACGT 	60
-----------------------GCGAGGTATAGAGTTCCTACG 	397
-----------------------GCGAGGTATAGAGTTCCTAC 	8
------------------------CGAGGTATAGAGTTCCTACG 	69
------------------------CGAGGTATAGAGTTCCTAC 	2
-------------------------GAGGTATAGAGTTCCTACG 	3
-----------------------------------------------------------TAGGAACTTCATACCGTGCTCTT 	238
-----------------------------------------------------------TAGGAACTTCATACCGTGC 	17
-----------------------------------------------------------TAGGAACTTCATACCGTGCTC 	887
-----------------------------------------------------------TAGGAACTTCATACCGTGCTCT 	33119
-----------------------------------------------------------TAGGAACTTCATACCGTGCT 	175
------------------------------------------------------------AGGAACTTCATACCGTGCTCTT 	3
------------------------------------------------------------AGGAACTTCATACCGTGCTCT 	59
-------------------------------------------------------------GGAACTTCATACCGTGCTC 	1
-------------------------------------------------------------GGAACTTCATACCGTGCTCT 	192
-------------------------------------------------------------GGAACTTCATACCGTGCTCTT 	3
--------------------------------------------------------------GAACTTCATACCGTGCTCT 	7


Overlaps with: MNEST036195 MNEST037155 MNEST037233 MNEST037524
Overlaps with miRBase pre-miRNAs: dse-mir-276a dya-mir-276a dsi-mir-276a der-mir-276a
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
6 Drosophila melanogaster GSM385822-16273 TAGGAACTTCATACCGTGCTCT AGCGAGGTATAGAGTTCCTACG down 4 0


Secondary structure

TTTTTACCTGGTTTTTGCCATCAGCGAGGTATAGAGTTCCTACGTTCATTATAAACTCGTAGGAACTTCATACCGTGCTCTTGGAAGACCAAAAAACAAC
---------------------CAGCGAGGTATAGAGTTCCTACG 	2
----------------------AGCGAGGTATAGAGTTCCTACGTT 	3
----------------------AGCGAGGTATAGAGTTCCTAC 	45
----------------------AGCGAGGTATAGAGTTCCTACGT 	13
----------------------AGCGAGGTATAGAGTTCCTACGTTC 	1
----------------------AGCGAGGTATAGAGTTCCTA 	39
----------------------AGCGAGGTATAGAGTTCCTACG 	1168
----------------------AGCGAGGTATAGAGTTCCT 	11
-----------------------GCGAGGTATAGAGTTCCTA 	1
-----------------------GCGAGGTATAGAGTTCCTACG 	22
------------------------CGAGGTATAGAGTTCCTAC 	1
-----------------------------------------------------------TAGGAACTTCATACCGTGC 	18
-----------------------------------------------------------TAGGAACTTCATACCGTGCTCT 	4522
-----------------------------------------------------------TAGGAACTTCATACCGTGCT 	92
-----------------------------------------------------------TAGGAACTTCATACCGTGCTCTT 	109
-----------------------------------------------------------TAGGAACTTCATACCGTGCTCTTG 	3
-----------------------------------------------------------TAGGAACTTCATACCGTGCTC 	529
------------------------------------------------------------AGGAACTTCATACCGTGCTCTT 	3
------------------------------------------------------------AGGAACTTCATACCGTGCTCT 	14
-------------------------------------------------------------GGAACTTCATACCGTGCTCT 	1


Overlaps with: MNEST036195 MNEST037155 MNEST037233 MNEST037524
Overlaps with miRBase pre-miRNAs: dse-mir-276a dya-mir-276a dsi-mir-276a der-mir-276a
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
7 Drosophila melanogaster GSM360256-14324 TAGGAACTTCATACCGTGCTCT AGCGAGGTATAGAGTTCCTACG down 4 0


Secondary structure

TTTTTACCTGGTTTTTGCCATCAGCGAGGTATAGAGTTCCTACGTTCATTATAAACTCGTAGGAACTTCATACCGTGCTCTTGGAAGACCAAAAAACAAC
----------------------AGCGAGGTATAGAGTTCCTACG 	386
----------------------AGCGAGGTATAGAGTTCCTA 	4
----------------------AGCGAGGTATAGAGTTCCTAC 	17
----------------------AGCGAGGTATAGAGTTCCTACGT 	2
-----------------------GCGAGGTATAGAGTTCCTACG 	9
------------------------CGAGGTATAGAGTTCCTACG 	6
-------------------------GAGGTATAGAGTTCCTACG 	1
-----------------------------------------------------------TAGGAACTTCATACCGTGCTCTT 	2
-----------------------------------------------------------TAGGAACTTCATACCGTGC 	1
-----------------------------------------------------------TAGGAACTTCATACCGTGCTC 	10
-----------------------------------------------------------TAGGAACTTCATACCGTGCTCT 	496
-----------------------------------------------------------TAGGAACTTCATACCGTGCT 	6
------------------------------------------------------------AGGAACTTCATACCGTGCT 	1
------------------------------------------------------------AGGAACTTCATACCGTGCTCT 	1
-------------------------------------------------------------GGAACTTCATACCGTGCTC 	1
-------------------------------------------------------------GGAACTTCATACCGTGCTCT 	5
--------------------------------------------------------------GAACTTCATACCGTGCTCT 	4


Overlaps with: MNEST036195 MNEST037155 MNEST037233 MNEST037524
Overlaps with miRBase pre-miRNAs: dse-mir-276a dya-mir-276a dsi-mir-276a der-mir-276a
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
8 Drosophila melanogaster GSM466494_r2d2_heterozygotes_untreated TAGGAACTTCATACCGTGCTCT AGCGAGGTATAGAGTTCCTACG down 4 0


Secondary structure

TTTTTACCTGGTTTTTGCCATCAGCGAGGTATAGAGTTCCTACGTTCATTATAAACTCGTAGGAACTTCATACCGTGCTCTTGGAAGACCAAAAAACAAC
---------------------CAGCGAGGTATAGAGTTCCTAC 	2
----------------------AGCGAGGTATAGAGTTCCTAC 	628
----------------------AGCGAGGTATAGAGTTCCTACGT 	88
----------------------AGCGAGGTATAGAGTTCCTA 	387
----------------------AGCGAGGTATAGAGTTCCTACG 	1002
----------------------AGCGAGGTATAGAGTTCCT 	278
-----------------------GCGAGGTATAGAGTTCCTACGT 	4
-----------------------GCGAGGTATAGAGTTCCTA 	4
-----------------------GCGAGGTATAGAGTTCCTACG 	54
-----------------------GCGAGGTATAGAGTTCCTAC 	6
------------------------CGAGGTATAGAGTTCCTACG 	27
----------------------------------------------------------GTAGGAACTTCATACCGTGCTCT 	2
-----------------------------------------------------------TAGGAACTTCATACCGTGC 	67
-----------------------------------------------------------TAGGAACTTCATACCGTGCTCT 	137697
-----------------------------------------------------------TAGGAACTTCATACCGTGCT 	1400
-----------------------------------------------------------TAGGAACTTCATACCGTGCTCTT 	2554
-----------------------------------------------------------TAGGAACTTCATACCGTGCTCTTG 	15
-----------------------------------------------------------TAGGAACTTCATACCGTGCTC 	11789
------------------------------------------------------------AGGAACTTCATACCGTGCT 	1
------------------------------------------------------------AGGAACTTCATACCGTGCTCTT 	3
------------------------------------------------------------AGGAACTTCATACCGTGCTCT 	64
------------------------------------------------------------AGGAACTTCATACCGTGCTC 	250
-------------------------------------------------------------GGAACTTCATACCGTGCTC 	8
-------------------------------------------------------------GGAACTTCATACCGTGCTCT 	74
--------------------------------------------------------------GAACTTCATACCGTGCTCT 	3


Overlaps with: MNEST036195 MNEST037155 MNEST037233 MNEST037524
Overlaps with miRBase pre-miRNAs: dse-mir-276a dya-mir-276a dsi-mir-276a der-mir-276a
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
9 Drosophila melanogaster GSM466496_r2d2_homozygotes_untreated TAGGAACTTCATACCGTGCTCT AGCGAGGTATAGAGTTCCTACG down 4 0


Secondary structure

TTTTTACCTGGTTTTTGCCATCAGCGAGGTATAGAGTTCCTACGTTCATTATAAACTCGTAGGAACTTCATACCGTGCTCTTGGAAGACCAAAAAACAAC
----------------------AGCGAGGTATAGAGTTCCTACGTT 	34
----------------------AGCGAGGTATAGAGTTCCTAC 	703
----------------------AGCGAGGTATAGAGTTCCTACGT 	149
----------------------AGCGAGGTATAGAGTTCCTA 	431
----------------------AGCGAGGTATAGAGTTCCTACG 	721
----------------------AGCGAGGTATAGAGTTCCT 	309
-----------------------GCGAGGTATAGAGTTCCTA 	1
-----------------------GCGAGGTATAGAGTTCCTACG 	3
-----------------------GCGAGGTATAGAGTTCCTAC 	3
------------------------CGAGGTATAGAGTTCCTACG 	16
----------------------------------------------------------GTAGGAACTTCATACCGTGCTCT 	3
-----------------------------------------------------------TAGGAACTTCATACCGTGC 	79
-----------------------------------------------------------TAGGAACTTCATACCGTGCTCT 	248775
-----------------------------------------------------------TAGGAACTTCATACCGTGCT 	2070
-----------------------------------------------------------TAGGAACTTCATACCGTGCTCTT 	4439
-----------------------------------------------------------TAGGAACTTCATACCGTGCTCTTG 	19
-----------------------------------------------------------TAGGAACTTCATACCGTGCTC 	16004
------------------------------------------------------------AGGAACTTCATACCGTGCT 	36
------------------------------------------------------------AGGAACTTCATACCGTGCTCTT 	96
------------------------------------------------------------AGGAACTTCATACCGTGCTCT 	4663
------------------------------------------------------------AGGAACTTCATACCGTGCTC 	367
-------------------------------------------------------------GGAACTTCATACCGTGCTCTT 	3
-------------------------------------------------------------GGAACTTCATACCGTGCTC 	26
-------------------------------------------------------------GGAACTTCATACCGTGCTCT 	165
--------------------------------------------------------------GAACTTCATACCGTGCTCT 	6
---------------------------------------------------------------AACTTCATACCGTGCTCTT 	4


Overlaps with: MNEST036195 MNEST037155 MNEST037233 MNEST037524
Overlaps with miRBase pre-miRNAs: dse-mir-276a dya-mir-276a dsi-mir-276a der-mir-276a
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
10 Drosophila melanogaster GSM385821-16268 TAGGAACTTCATACCGTGCTCT AGCGAGGTATAGAGTTCCTACG down 4 0


Secondary structure

TTTTTACCTGGTTTTTGCCATCAGCGAGGTATAGAGTTCCTACGTTCATTATAAACTCGTAGGAACTTCATACCGTGCTCTTGGAAGACCAAAAAACAAC
----------------------AGCGAGGTATAGAGTTCCTACGTT 	4
----------------------AGCGAGGTATAGAGTTCCTACGT 	23
-----------------------GCGAGGTATAGAGTTCCTACGT 	1
----------------------------------------------------AAACTCGTAGGAACTTCATACCGT 	1
-----------------------------------------------------------TAGGAACTTCATACCGTGC 	75
-----------------------------------------------------------TAGGAACTTCATACCGTGCTCT 	19402
------------------------------------------------------------AGGAACTTCATACCGTGCTCTT 	14
-------------------------------------------------------------GGAACTTCATACCGTGCTC 	1


Overlaps with: MNEST036195 MNEST037155 MNEST037233 MNEST037524
Overlaps with miRBase pre-miRNAs: dse-mir-276a dya-mir-276a dsi-mir-276a der-mir-276a
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
11 Drosophila melanogaster GSM286605-9793 TAGGAACTTCATACCGTGCTCT AGCGAGGTATAGAGTTCCTACG down 4 0


Secondary structure

TTTTTACCTGGTTTTTGCCATCAGCGAGGTATAGAGTTCCTACGTTCATTATAAACTCGTAGGAACTTCATACCGTGCTCTTGGAAGACCAAAAAACAAC
----------------------AGCGAGGTATAGAGTTCCTACGTT 	3
----------------------AGCGAGGTATAGAGTTCCTA 	25
----------------------AGCGAGGTATAGAGTTCCTAC 	97
----------------------AGCGAGGTATAGAGTTCCTACGT 	19
----------------------AGCGAGGTATAGAGTTCCTACG 	1776
-----------------------GCGAGGTATAGAGTTCCTACG 	75
------------------------CGAGGTATAGAGTTCCTACG 	9
-------------------------GAGGTATAGAGTTCCTACG 	2
-----------------------------------------------------------TAGGAACTTCATACCGTGCTCT 	2134
-----------------------------------------------------------TAGGAACTTCATACCGTGCTCTT 	47
-----------------------------------------------------------TAGGAACTTCATACCGTGCTC 	121
-----------------------------------------------------------TAGGAACTTCATACCGTGCT 	41
------------------------------------------------------------AGGAACTTCATACCGTGCTCT 	5
-------------------------------------------------------------GGAACTTCATACCGTGCTCT 	4


Overlaps with: MNEST036195 MNEST037155 MNEST037233 MNEST037524
Overlaps with miRBase pre-miRNAs: dse-mir-276a dya-mir-276a dsi-mir-276a der-mir-276a
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
12 Drosophila melanogaster GSM360260-14326 TAGGAACTTCATACCGTGCTCT AGCGAGGTATAGAGTTCCTACG down 4 0


Secondary structure

TTTTTACCTGGTTTTTGCCATCAGCGAGGTATAGAGTTCCTACGTTCATTATAAACTCGTAGGAACTTCATACCGTGCTCTTGGAAGACCAAAAAACAAC
---------------------CAGCGAGGTATAGAGTTCCTACG 	2
----------------------AGCGAGGTATAGAGTTCCTACG 	11724
----------------------AGCGAGGTATAGAGTTCCTACGTTC 	1
----------------------AGCGAGGTATAGAGTTCCTACGTT 	4
----------------------AGCGAGGTATAGAGTTCCTA 	108
----------------------AGCGAGGTATAGAGTTCCTAC 	734
----------------------AGCGAGGTATAGAGTTCCT 	6
----------------------AGCGAGGTATAGAGTTCCTACGT 	38
-----------------------GCGAGGTATAGAGTTCCTACG 	190
-----------------------GCGAGGTATAGAGTTCCTA 	3
-----------------------GCGAGGTATAGAGTTCCTAC 	7
------------------------CGAGGTATAGAGTTCCTACG 	25
-------------------------GAGGTATAGAGTTCCTACG 	8
----------------------------------------------------------GTAGGAACTTCATACCGTGCTCT 	1
-----------------------------------------------------------TAGGAACTTCATACCGTGCTCTT 	197
-----------------------------------------------------------TAGGAACTTCATACCGTGC 	9
-----------------------------------------------------------TAGGAACTTCATACCGTGCTC 	459
-----------------------------------------------------------TAGGAACTTCATACCGTGCTCT 	22749
-----------------------------------------------------------TAGGAACTTCATACCGTGCT 	138
------------------------------------------------------------AGGAACTTCATACCGTGCT 	1
------------------------------------------------------------AGGAACTTCATACCGTGCTCTT 	2
------------------------------------------------------------AGGAACTTCATACCGTGCTCT 	52
-------------------------------------------------------------GGAACTTCATACCGTGCTC 	2
-------------------------------------------------------------GGAACTTCATACCGTGCTCT 	147
-------------------------------------------------------------GGAACTTCATACCGTGCTCTT 	3
--------------------------------------------------------------GAACTTCATACCGTGCTCT 	8


Overlaps with: MNEST036195 MNEST037155 MNEST037233 MNEST037524
Overlaps with miRBase pre-miRNAs: dse-mir-276a dya-mir-276a dsi-mir-276a der-mir-276a
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
13 Drosophila melanogaster GSM322543-14323 TAGGAACTTCATACCGTGCTCT AGCGAGGTATAGAGTTCCTACG down 4 0


Secondary structure

TTTTTACCTGGTTTTTGCCATCAGCGAGGTATAGAGTTCCTACGTTCATTATAAACTCGTAGGAACTTCATACCGTGCTCTTGGAAGACCAAAAAACAAC
---------------------CAGCGAGGTATAGAGTTCCTACG 	6
----------------------AGCGAGGTATAGAGTTCCTACGTT 	62
----------------------AGCGAGGTATAGAGTTCCTA 	2515
----------------------AGCGAGGTATAGAGTTCCTAC 	6408
----------------------AGCGAGGTATAGAGTTCCT 	224
----------------------AGCGAGGTATAGAGTTCCTACG 	58537
----------------------AGCGAGGTATAGAGTTCCTACGT 	558
-----------------------GCGAGGTATAGAGTTCCTACGT 	11
-----------------------GCGAGGTATAGAGTTCCTACG 	1085
-----------------------GCGAGGTATAGAGTTCCTA 	3
-----------------------GCGAGGTATAGAGTTCCTAC 	62
------------------------CGAGGTATAGAGTTCCTACG 	330
------------------------CGAGGTATAGAGTTCCTAC 	11
-------------------------GAGGTATAGAGTTCCTACG 	52
-----------------------------------------------------------TAGGAACTTCATACCGTGCTC 	13392
-----------------------------------------------------------TAGGAACTTCATACCGTGCTCT 	175092
-----------------------------------------------------------TAGGAACTTCATACCGTGCTCTT 	2363
-----------------------------------------------------------TAGGAACTTCATACCGTGCT 	2967
-----------------------------------------------------------TAGGAACTTCATACCGTGC 	94
-----------------------------------------------------------TAGGAACTTCATACCGTGCTCTTG 	4
------------------------------------------------------------AGGAACTTCATACCGTGCTCT 	364
------------------------------------------------------------AGGAACTTCATACCGTGCTCTT 	43
------------------------------------------------------------AGGAACTTCATACCGTGCTC 	19
-------------------------------------------------------------GGAACTTCATACCGTGCTC 	104
-------------------------------------------------------------GGAACTTCATACCGTGCTCTT 	13
-------------------------------------------------------------GGAACTTCATACCGTGCTCT 	1307
--------------------------------------------------------------GAACTTCATACCGTGCTCT 	6


Overlaps with: MNEST036195 MNEST037155 MNEST037233 MNEST037524
Overlaps with miRBase pre-miRNAs: dse-mir-276a dya-mir-276a dsi-mir-276a der-mir-276a
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
14 Drosophila melanogaster GSM399101-5265 TAGGAACTTCATACCGTGCTCT AGCGAGGTATAGAGTTCCTACG down 4 0


Secondary structure

TTTTTACCTGGTTTTTGCCATCAGCGAGGTATAGAGTTCCTACGTTCATTATAAACTCGTAGGAACTTCATACCGTGCTCTTGGAAGACCAAAAAACAAC
--------------------TCAGCGAGGTATAGAGTTCCTACG 	1
----------------------AGCGAGGTATAGAGTTCCTACGTT 	9
----------------------AGCGAGGTATAGAGTTCCTA 	13
----------------------AGCGAGGTATAGAGTTCCTAC 	69
----------------------AGCGAGGTATAGAGTTCCTACGT 	36
----------------------AGCGAGGTATAGAGTTCCTACG 	16820
----------------------AGCGAGGTATAGAGTTCCT 	21
-----------------------GCGAGGTATAGAGTTCCTACG 	694
-----------------------GCGAGGTATAGAGTTCCTAC 	2
------------------------CGAGGTATAGAGTTCCTACG 	1
-------------------------GAGGTATAGAGTTCCTACG 	9
-----------------------------------------------------------TAGGAACTTCATACCGTGC 	5
-----------------------------------------------------------TAGGAACTTCATACCGTGCTCT 	26686
-----------------------------------------------------------TAGGAACTTCATACCGTGCTCTT 	725
-----------------------------------------------------------TAGGAACTTCATACCGTGCTCTTG 	1
-----------------------------------------------------------TAGGAACTTCATACCGTGCTC 	2221
-----------------------------------------------------------TAGGAACTTCATACCGTGCT 	214
------------------------------------------------------------AGGAACTTCATACCGTGCTCT 	10
------------------------------------------------------------AGGAACTTCATACCGTGCTC 	3
-------------------------------------------------------------GGAACTTCATACCGTGCTCT 	2
--------------------------------------------------------------GAACTTCATACCGTGCTCT 	1


Overlaps with: MNEST036195 MNEST037155 MNEST037233 MNEST037524
Overlaps with miRBase pre-miRNAs: dse-mir-276a dya-mir-276a dsi-mir-276a der-mir-276a
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
15 Drosophila melanogaster GSM286604-9792 TAGGAACTTCATACCGTGCTCT AGCGAGGTATAGAGTTCCTACG down 4 0


Secondary structure

TTTTTACCTGGTTTTTGCCATCAGCGAGGTATAGAGTTCCTACGTTCATTATAAACTCGTAGGAACTTCATACCGTGCTCTTGGAAGACCAAAAAACAAC
----------------------AGCGAGGTATAGAGTTCCTACG 	9579
----------------------AGCGAGGTATAGAGTTCCTACGTT 	7
----------------------AGCGAGGTATAGAGTTCCTA 	202
----------------------AGCGAGGTATAGAGTTCCTAC 	788
----------------------AGCGAGGTATAGAGTTCCT 	6
----------------------AGCGAGGTATAGAGTTCCTACGT 	99
-----------------------GCGAGGTATAGAGTTCCTACG 	512
-----------------------GCGAGGTATAGAGTTCCTAC 	27
------------------------CGAGGTATAGAGTTCCTACG 	41
-------------------------GAGGTATAGAGTTCCTACG 	3
-----------------------------------------------------------TAGGAACTTCATACCGTGCTCTT 	260
-----------------------------------------------------------TAGGAACTTCATACCGTGC 	6
-----------------------------------------------------------TAGGAACTTCATACCGTGCTCTTG 	1
-----------------------------------------------------------TAGGAACTTCATACCGTGCTC 	1228
-----------------------------------------------------------TAGGAACTTCATACCGTGCTCT 	14347
-----------------------------------------------------------TAGGAACTTCATACCGTGCT 	292
------------------------------------------------------------AGGAACTTCATACCGTGCTCTT 	10
------------------------------------------------------------AGGAACTTCATACCGTGCTCT 	27
------------------------------------------------------------AGGAACTTCATACCGTGCTC 	3
-------------------------------------------------------------GGAACTTCATACCGTGCTCT 	46
--------------------------------------------------------------GAACTTCATACCGTGCTCT 	4
--------------------------------------------------------------GAACTTCATACCGTGCTCTT 	6


Overlaps with: MNEST036195 MNEST037155 MNEST037233 MNEST037524
Overlaps with miRBase pre-miRNAs: dse-mir-276a dya-mir-276a dsi-mir-276a der-mir-276a
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
16 Drosophila melanogaster GSM385744-16261 TAGGAACTTCATACCGTGCTCT AGCGAGGTATAGAGTTCCTACG down 4 0


Secondary structure

TTTTTACCTGGTTTTTGCCATCAGCGAGGTATAGAGTTCCTACGTTCATTATAAACTCGTAGGAACTTCATACCGTGCTCTTGGAAGACCAAAAAACAAC
---------------------CAGCGAGGTATAGAGTTCCTACG 	5
----------------------AGCGAGGTATAGAGTTCCTAC 	39
----------------------AGCGAGGTATAGAGTTCCTACGT 	10
----------------------AGCGAGGTATAGAGTTCCTA 	46
----------------------AGCGAGGTATAGAGTTCCTACG 	1058
----------------------AGCGAGGTATAGAGTTCCT 	14
-----------------------GCGAGGTATAGAGTTCCTACGT 	1
-----------------------GCGAGGTATAGAGTTCCTACG 	17
-----------------------GCGAGGTATAGAGTTCCTAC 	2
------------------------CGAGGTATAGAGTTCCTACG 	1
----------------------------------------------------------GTAGGAACTTCATACCGTGCTCT 	1
-----------------------------------------------------------TAGGAACTTCATACCGTGC 	23
-----------------------------------------------------------TAGGAACTTCATACCGTGCTCT 	6902
-----------------------------------------------------------TAGGAACTTCATACCGTGCT 	147
-----------------------------------------------------------TAGGAACTTCATACCGTGCTCTT 	138
-----------------------------------------------------------TAGGAACTTCATACCGTGCTCTTG 	3
-----------------------------------------------------------TAGGAACTTCATACCGTGCTC 	808
------------------------------------------------------------AGGAACTTCATACCGTGCTCTT 	4
------------------------------------------------------------AGGAACTTCATACCGTGCTCT 	22
-------------------------------------------------------------GGAACTTCATACCGTGCTCT 	4


Overlaps with: MNEST036195 MNEST037155 MNEST037233 MNEST037524
Overlaps with miRBase pre-miRNAs: dse-mir-276a dya-mir-276a dsi-mir-276a der-mir-276a
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
17 Drosophila melanogaster GSM385748-16264 TAGGAACTTCATACCGTGCTCT AGCGAGGTATAGAGTTCCTACG down 4 0


Secondary structure

TTTTTACCTGGTTTTTGCCATCAGCGAGGTATAGAGTTCCTACGTTCATTATAAACTCGTAGGAACTTCATACCGTGCTCTTGGAAGACCAAAAAACAAC
---------------------CAGCGAGGTATAGAGTTCCTACG 	6
----------------------AGCGAGGTATAGAGTTCCTACGTT 	2
----------------------AGCGAGGTATAGAGTTCCTACGT 	16
----------------------AGCGAGGTATAGAGTTCCT 	30
----------------------AGCGAGGTATAGAGTTCCTAC 	90
----------------------AGCGAGGTATAGAGTTCCTA 	82
----------------------AGCGAGGTATAGAGTTCCTACG 	2288
-----------------------GCGAGGTATAGAGTTCCTACGT 	1
-----------------------GCGAGGTATAGAGTTCCTA 	2
-----------------------GCGAGGTATAGAGTTCCTACG 	36
-----------------------GCGAGGTATAGAGTTCCTAC 	4
------------------------CGAGGTATAGAGTTCCTACG 	3
-------------------------GAGGTATAGAGTTCCTACG 	1
----------------------------------------------------AAACTCGTAGGAACTTCATACCGT 	1
----------------------------------------------------------GTAGGAACTTCATACCGTGCTCT 	1
-----------------------------------------------------------TAGGAACTTCATACCGTGC 	51
-----------------------------------------------------------TAGGAACTTCATACCGTGCTCT 	13891
-----------------------------------------------------------TAGGAACTTCATACCGTGCT 	294
-----------------------------------------------------------TAGGAACTTCATACCGTGCTCTTG 	8
-----------------------------------------------------------TAGGAACTTCATACCGTGCTC 	1630
-----------------------------------------------------------TAGGAACTTCATACCGTGCTCTT 	278
------------------------------------------------------------AGGAACTTCATACCGTGCTCTT 	5
------------------------------------------------------------AGGAACTTCATACCGTGCTCT 	46
------------------------------------------------------------AGGAACTTCATACCGTGCTC 	3
-------------------------------------------------------------GGAACTTCATACCGTGCTC 	1
-------------------------------------------------------------GGAACTTCATACCGTGCTCT 	8
--------------------------------------------------------------GAACTTCATACCGTGCTCT 	1


Overlaps with: MNEST036195 MNEST037155 MNEST037233 MNEST037524
Overlaps with miRBase pre-miRNAs: dse-mir-276a dya-mir-276a dsi-mir-276a der-mir-276a
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
18 Drosophila melanogaster GSM466492_dcr-2_homozygotes_untreated TAGGAACTTCATACCGTGCTCT AGCGAGGTATAGAGTTCCTACG down 4 0


Secondary structure

TTTTTACCTGGTTTTTGCCATCAGCGAGGTATAGAGTTCCTACGTTCATTATAAACTCGTAGGAACTTCATACCGTGCTCTTGGAAGACCAAAAAACAAC
-------------------ATCAGCGAGGTATAGAGTTCCTACG 	2
--------------------TCAGCGAGGTATAGAGTTCCTA 	1
---------------------CAGCGAGGTATAGAGTTCCTACG 	1
---------------------CAGCGAGGTATAGAGTTCCTAC 	1
---------------------CAGCGAGGTATAGAGTTCCTA 	1
----------------------AGCGAGGTATAGAGTTCCTACGTT 	21
----------------------AGCGAGGTATAGAGTTCCTA 	211
----------------------AGCGAGGTATAGAGTTCCTAC 	587
----------------------AGCGAGGTATAGAGTTCCTACG 	1544
----------------------AGCGAGGTATAGAGTTCCT 	188
----------------------AGCGAGGTATAGAGTTCCTACGT 	147
-----------------------GCGAGGTATAGAGTTCCTACG 	15
-----------------------GCGAGGTATAGAGTTCCTA 	1
-----------------------GCGAGGTATAGAGTTCCTAC 	8
------------------------CGAGGTATAGAGTTCCTACG 	85
------------------------CGAGGTATAGAGTTCCTACGT 	1
------------------------CGAGGTATAGAGTTCCTAC 	1
-------------------------GAGGTATAGAGTTCCTACG 	11
----------------------------------------------------------GTAGGAACTTCATACCGTGCTCT 	3
-----------------------------------------------------------TAGGAACTTCATACCGTGCTC 	9193
-----------------------------------------------------------TAGGAACTTCATACCGTGCTCT 	109027
-----------------------------------------------------------TAGGAACTTCATACCGTGCTCTT 	1985
-----------------------------------------------------------TAGGAACTTCATACCGTGCT 	1792
-----------------------------------------------------------TAGGAACTTCATACCGTGC 	57
-----------------------------------------------------------TAGGAACTTCATACCGTGCTCTTG 	8
------------------------------------------------------------AGGAACTTCATACCGTGCTCT 	1317
------------------------------------------------------------AGGAACTTCATACCGTGCT 	18
------------------------------------------------------------AGGAACTTCATACCGTGCTCTT 	27
------------------------------------------------------------AGGAACTTCATACCGTGCTC 	116
-------------------------------------------------------------GGAACTTCATACCGTGCTC 	6
-------------------------------------------------------------GGAACTTCATACCGTGCTCTT 	1
-------------------------------------------------------------GGAACTTCATACCGTGCTCT 	78
--------------------------------------------------------------GAACTTCATACCGTGCTCT 	26


Overlaps with: MNEST036195 MNEST037155 MNEST037233 MNEST037524
Overlaps with miRBase pre-miRNAs: dse-mir-276a dya-mir-276a dsi-mir-276a der-mir-276a
HuntMi prediction: true miRNA