miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: deep sequencing predictions



Please select library, species and/or miRNA sequence.


selected mature miRNA sequence: TAGTCCGGTTTTGGATACGTG

selected species: Arabidopsis thaliana



1 records found  

#specieslibrarymiRNAmiRNA*armmismatchesbulges
1 Arabidopsis thaliana GSM518432-13544 TAGTCCGGTTTTGGATACGTG CGTGTCCAAAACCAGATTATC up 1 0


Secondary structure

CCTCTATGATATAGTCCGGTTTTGGATACGTGAAAATCATATCATATTGCTGCTGTGAAAAGTTAATTTTCACGTGTCCAAAACCAGATTATCTCATATTG
-----------TAGTCCGGTTTTGGATACGTG 	6
-----------TAGTCCGGTTTTGGATACGTGA 	2
------------AGTCCGGTTTTGGATACGTGA 	2
--------------TCCGGTTTTGGATACGTGAA 	1

Overlaps with: MNEST040144 MNEST047059
Overlaps with miRBase pre-miRNAs: ath-MIR826
HuntMi prediction: true miRNA