miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: deep sequencing predictions



Please select library, species and/or miRNA sequence.


selected mature miRNA sequence: TATCACAGCCACTTTGATGAGC

selected species: Acyrthosiphon pisum



1 records found  

#specieslibrarymiRNAmiRNA*armmismatchesbulges
1 Acyrthosiphon pisum GSM502519_unique_quant TATCACAGCCACTTTGATGAGC CGTCAAAATGGATGTGAAGTG down 3 1


Secondary structure

CTACCTAATGCCAGACATAGGCCGTCAAAATGGATGTGAAGTGGTTTTTTTTACTATTCATATCACAGCCACTTTGATGAGCCGATGTGTGTGGTACAATC
----------------------CGTCAAAATGGATGTGAAGTG 	4
-----------------------GTCAAAATGGATGTGAAGTG 	1
-----------------------------------------------------------ATATCACAGCCACTTTGATGAGC 	2
-----------------------------------------------------------ATATCACAGCCACTTTGATGAG 	7
-----------------------------------------------------------ATATCACAGCCACTTTGATGA 	1
-----------------------------------------------------------ATATCACAGCCACTTTGATG 	1
------------------------------------------------------------TATCACAGCCACTTTGATGAGC 	227
------------------------------------------------------------TATCACAGCCACTTTGATGAG 	24
------------------------------------------------------------TATCACAGCCACTTTGATGA 	14
------------------------------------------------------------TATCACAGCCACTTTGATG 	1


HuntMi prediction: true miRNA