miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: deep sequencing predictions



Please select library, species and/or miRNA sequence.


selected mature miRNA sequence: TATGTTGCAGATTCTTCATTT

selected species: Physcomitrella patens



1 records found  

#specieslibrarymiRNAmiRNA*armmismatchesbulges
1 Physcomitrella patens GSM115097 TATGTTGCAGATTCTTCATTT AAGAAGGATCTGCAACATATA up 1 0


Secondary structure

GCACTGGTTATCTCTCTCGTCTATGTTGCAGATTCTTCATTTGCAAAACTGATCATAGAAGTTAAGTGAAAGAAGGATCTGCAACATATACAAGAACGGATAATCGGA
---------------------TATGTTGCAGATTCTTCATTT 	12
---------------------TATGTTGCAGATTCTTCATT 	5
-----------------------TGTTGCAGATTCTTCATTTGC 	2
-----------------------TGTTGCAGATTCTTCATTT 	1

Overlaps with: MNEST039567 MNEST039568
Overlaps with miRBase pre-miRNAs: ppt-MIR902l
HuntMi prediction: true miRNA