miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: deep sequencing predictions



Please select library, species and/or miRNA sequence.


selected mature miRNA sequence: TATTGCACTTGACCCAGCCTGC

selected species: Acyrthosiphon pisum



1 records found  

#specieslibrarymiRNAmiRNA*armmismatchesbulges
1 Acyrthosiphon pisum GSM502519_unique_quant TATTGCACTTGACCCAGCCTGC AGGTTGTGTTGTTTGCAATATG down 4 0


Secondary structure

CAAACAAAGAATGTAGCAAATTAGGTTGTGTTGTTTGCAATATGTATTGTACATTACCGTGTGCGGTCCGTACACGATCTCATATTGCACTTGACCCAGCCTGCAATGCACATTTCGTATCTA
----------------------AGGTTGTGTTGTTTGCAATAT 	1
----------------------------------------------------------------------------------TATTGCACTTGACCCAGCCTGC 	393
----------------------------------------------------------------------------------TATTGCACTTGACCCAGCCTG 	105
----------------------------------------------------------------------------------TATTGCACTTGACCCAGCCTGCAA 	4
----------------------------------------------------------------------------------TATTGCACTTGACCCAGCCTGCA 	7
----------------------------------------------------------------------------------TATTGCACTTGACCCAGCCT 	56
----------------------------------------------------------------------------------TATTGCACTTGACCCAGCC 	2
-----------------------------------------------------------------------------------ATTGCACTTGACCCAGCCTGC 	1
-----------------------------------------------------------------------------------ATTGCACTTGACCCAGCCTG 	1

Overlaps with: MNEST035060 MNEST035061
Overlaps with miRBase pre-miRNAs: api-mir-92b-2 api-mir-92b-1
HuntMi prediction: true miRNA