miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: deep sequencing predictions



Please select library, species and/or miRNA sequence.


selected mature miRNA sequence: TCAATGCATTGAAAGTGACTA

selected species: Arabidopsis thaliana



1 records found  

#specieslibrarymiRNAmiRNA*armmismatchesbulges
1 Arabidopsis thaliana GSM415785 TCAATGCATTGAAAGTGACTA GTCACTTTCACTGCATTAATC up 2 0


Secondary structure

TATTGCGTCGATCAATGCATTGAAAGTGACTACATCGGGGTTCCGATTTTTTTTGTTCTTCATATGATGAAGCGGAAACAGTAATCAACCCTGGTTTAGTCACTTTCACTGCATTAATCAATGCATT
-----------TCAATGCATTGAAAGTGACTAC 	1
-----------TCAATGCATTGAAAGTGACTA 	111
-----------TCAATGCATTGAAAGTGACT 	10
-----------TCAATGCATTGAAAGTGAC 	1
------------CAATGCATTGAAAGTGACTA 	2
-------------------TTGAAAGTGACTACATCGGGGT 	2
-------------------TTGAAAGTGACTACATCGGGG 	70
-------------------TTGAAAGTGACTACATCGG 	1
--------------------TGAAAGTGACTACATCGGGGT 	5
--------------------TGAAAGTGACTACATCGGGG 	1
--------------------------------------------------------------------------------------AACCCTGGTTTAGTCACTTTC 	1
-----------------------------------------------------------------------------------------CCTGGTTTAGTCACTTTCACT 	2
----------------------------------------------------------------------------------------------TTTAGTCACTTTCACTGCATT 	6
--------------------------------------------------------------------------------------------------GTCACTTTCACTGCATTAATC 	2
---------------------------------------------------------------------------------------------------TCACTTTCACTGCATTAATC 	1



HuntMi prediction: true miRNA