miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: deep sequencing predictions



Please select library, species and/or miRNA sequence.


selected mature miRNA sequence: TCACTGGGAATGTAATAGCTAT

selected species: Bombyx mori



2 records found  

#specieslibrarymiRNAmiRNA*armmismatchesbulges
1 Bombyx mori GSM449725_whole_body_clean TCACTGGGAATGTAATAGCTAT AGCTATTACTTCTCCAGAAGACA down 1 3


Secondary structure

TCTTTCAACAATAGCTATTACTTCTCCAGAAGACATTCACATTCTGTCACTGGGAATGTAATAGCTATTTCCAAAAT
----------------------------------------------TCACTGGGAATGTAATAGCTAT 	5

Overlaps with: MNEST035599 MNEST035600
Overlaps with miRBase pre-miRNAs: bmo-mir-2733e-3 bmo-mir-2733e-2
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
2 Bombyx mori GSM449725_whole_body_clean TCACTGGGAATGTAATAGCTAT AGTTATCACTTCCTCAGTCGACA down 1 3


Secondary structure

CTACAACAATGTCTCTCAACAATAGTTATCACTTCCTCAGTCGACATGTTTTCACATTCTGTCACTGGGAATGTAATAGCTATTCTGGATAGACGGTTAACTT
-------------------------------------------------------------TCACTGGGAATGTAATAGCTAT 	5


HuntMi prediction: true miRNA