miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: deep sequencing predictions



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selected mature miRNA sequence: TCCCTGAGACCCTAACTTGTGA

selected species: Homo sapiens



35 records found  

#specieslibrarymiRNAmiRNA*armmismatchesbulges
1 Homo sapiens GSM569185 TCCCTGAGACCCTAACTTGTGA ACGGGTTAGGCTCTTGGGAGCT up 3 0


Secondary structure

AAGAAAGAAAACATTGTTGCGCTCCTCTCAGTCCCTGAGACCCTAACTTGTGATGTTTACCGTTTAAATCCACGGGTTAGGCTCTTGGGAGCTGCGAGTCGTGCTTTTGCATCCTGGAAAT
-------------------------------TCCCTGAGACCCTAACTTG 	1
-------------------------------TCCCTGAGACCCTAACTTGTG 	16
-------------------------------TCCCTGAGACCCTAACTTGTGA 	76
-------------------------------TCCCTGAGACCCTAACTTGT 	8
-------------------------------TCCCTGAGACCCTAACTTGTGAT 	3
---------------------------------CCTGAGACCCTAACTTGTGA 	1
--------------------------------------------------------------------TCCACGGGTTAGGCTCTTGG 	1
----------------------------------------------------------------------CACGGGTTAGGCTCTTGGGAG 	1
-----------------------------------------------------------------------ACGGGTTAGGCTCTTGGGAG 	5

Overlaps with: MNEST027507 MNEST027570 MNEST027615 MNEST027719 MNEST028208 MNEST028301 MNEST028432 MNEST030210 MNEST030819
Overlaps with miRBase pre-miRNAs: cfa-mir-125b-1 ppy-mir-125b-1 ggo-mir-125b-1 age-mir-125b-1 sla-mir-125b mml-mir-125b-1 ptr-mir-125b-1 mne-mir-125b-1 hsa-mir-125b-1 lla-mir-125b-1
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
2 Homo sapiens GSM569185 TCCCTGAGACCCTAACTTGTGA ACAAGTCAGGCTCTTGGGACC up 2 1


Secondary structure

ATCAAACCAGACTTTTCCTAGTCCCTGAGACCCTAACTTGTGAGGTATTTTAGTAACATCACAAGTCAGGCTCTTGGGACCTAGGCGGAGGGGAACCAG
---------------------TCCCTGAGACCCTAACTTG 	1
---------------------TCCCTGAGACCCTAACTTGTGAG 	1
---------------------TCCCTGAGACCCTAACTTGTG 	16
---------------------TCCCTGAGACCCTAACTTGTGA 	76
---------------------TCCCTGAGACCCTAACTTGT 	8
-----------------------CCTGAGACCCTAACTTGTGA 	1
------------------------------------------------------------ACAAGTCAGGCTCTTGGGAC 	1

Overlaps with: MNEST027508 MNEST027571 MNEST027720 MNEST028209 MNEST028302 MNEST028433 MNEST030211 MNEST030820 MNEST031407 MNEST033972
Overlaps with miRBase pre-miRNAs: cfa-mir-125b-2 age-mir-125b-2 ppy-mir-125b-2 ggo-mir-125b-2 ssc-mir-125b-2 lca-mir-125b ptr-mir-125b-2 lla-mir-125b-2 mml-mir-125b-2 mne-mir-125b-2 hsa-mir-125b-2
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
3 Homo sapiens GSM565979-9647 TCCCTGAGACCCTAACTTGTGA ACGGGTTAGGCTCTTGGGAGCT up 3 0


Secondary structure

AAGAAAGAAAACATTGTTGCGCTCCTCTCAGTCCCTGAGACCCTAACTTGTGATGTTTACCGTTTAAATCCACGGGTTAGGCTCTTGGGAGCTGCGAGTCGTGCTTTTGCATCCTGGAAAT
-------------------------------TCCCTGAGACCCTAACTTGTGA 	218
-------------------------------TCCCTGAGACCCTAACTTGTG 	28
-------------------------------TCCCTGAGACCCTAACTTGTGAT 	4
-------------------------------TCCCTGAGACCCTAACTTGT 	3
-------------------------------TCCCTGAGACCCTAACTTG 	1
----------------------------------CTGAGACCCTAACTTGTGA 	1
-----------------------------------------------------------------------ACGGGTTAGGCTCTTGGGAGC 	2
-----------------------------------------------------------------------ACGGGTTAGGCTCTTGGGAG 	2
-----------------------------------------------------------------------ACGGGTTAGGCTCTTGGGAGCT 	2

Overlaps with: MNEST027507 MNEST027570 MNEST027615 MNEST027719 MNEST028208 MNEST028301 MNEST028432 MNEST030210 MNEST030819
Overlaps with miRBase pre-miRNAs: cfa-mir-125b-1 ppy-mir-125b-1 ggo-mir-125b-1 age-mir-125b-1 sla-mir-125b mml-mir-125b-1 ptr-mir-125b-1 mne-mir-125b-1 hsa-mir-125b-1 lla-mir-125b-1
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
4 Homo sapiens GSM565979-9647 TCCCTGAGACCCTAACTTGTGA ACAAGTCAGGCTCTTGGGACC up 2 1


Secondary structure

ATCAAACCAGACTTTTCCTAGTCCCTGAGACCCTAACTTGTGAGGTATTTTAGTAACATCACAAGTCAGGCTCTTGGGACCTAGGCGGAGGGGAACCAG
---------------------TCCCTGAGACCCTAACTTGTGA 	218
---------------------TCCCTGAGACCCTAACTTGTG 	28
---------------------TCCCTGAGACCCTAACTTGT 	3
---------------------TCCCTGAGACCCTAACTTG 	1
---------------------TCCCTGAGACCCTAACTTGTGAG 	1
------------------------CTGAGACCCTAACTTGTGA 	1
---------------------------------------------------------ATCACAAGTCAGGCTCTTGGGA 	2
------------------------------------------------------------ACAAGTCAGGCTCTTGGGA 	2
------------------------------------------------------------ACAAGTCAGGCTCTTGGGAC 	1

Overlaps with: MNEST027508 MNEST027571 MNEST027720 MNEST028209 MNEST028302 MNEST028433 MNEST030211 MNEST030820 MNEST031407 MNEST033972
Overlaps with miRBase pre-miRNAs: cfa-mir-125b-2 age-mir-125b-2 ppy-mir-125b-2 ggo-mir-125b-2 ssc-mir-125b-2 lca-mir-125b ptr-mir-125b-2 lla-mir-125b-2 mml-mir-125b-2 mne-mir-125b-2 hsa-mir-125b-2
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
5 Homo sapiens GSM494810_Normal_2 TCCCTGAGACCCTAACTTGTGA ACGGGTTAGGCTCTTGGGAGCT up 3 0


Secondary structure

AAGAAAGAAAACATTGTTGCGCTCCTCTCAGTCCCTGAGACCCTAACTTGTGATGTTTACCGTTTAAATCCACGGGTTAGGCTCTTGGGAGCTGCGAGTCGTGCTTTTGCATCCTGGAAAT
-------------------------------TCCCTGAGACCCTAACTTGTGA 	17
-------------------------------TCCCTGAGACCCTAACTTGTG 	5
-------------------------------TCCCTGAGACCCTAACTTGT 	2

Overlaps with: MNEST027507 MNEST027570 MNEST027615 MNEST027719 MNEST028208 MNEST028301 MNEST028432 MNEST030210 MNEST030819
Overlaps with miRBase pre-miRNAs: cfa-mir-125b-1 ppy-mir-125b-1 ggo-mir-125b-1 age-mir-125b-1 sla-mir-125b mml-mir-125b-1 ptr-mir-125b-1 mne-mir-125b-1 hsa-mir-125b-1 lla-mir-125b-1
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
6 Homo sapiens GSM494810_Normal_2 TCCCTGAGACCCTAACTTGTGA ACAAGTCAGGCTCTTGGGACC up 2 1


Secondary structure

ATCAAACCAGACTTTTCCTAGTCCCTGAGACCCTAACTTGTGAGGTATTTTAGTAACATCACAAGTCAGGCTCTTGGGACCTAGGCGGAGGGGAACCAG
---------------------TCCCTGAGACCCTAACTTGTGA 	17
---------------------TCCCTGAGACCCTAACTTGTG 	5
---------------------TCCCTGAGACCCTAACTTGT 	2

Overlaps with: MNEST027508 MNEST027571 MNEST027720 MNEST028209 MNEST028302 MNEST028433 MNEST030211 MNEST030820 MNEST031407 MNEST033972
Overlaps with miRBase pre-miRNAs: cfa-mir-125b-2 age-mir-125b-2 ppy-mir-125b-2 ggo-mir-125b-2 ssc-mir-125b-2 lca-mir-125b ptr-mir-125b-2 lla-mir-125b-2 mml-mir-125b-2 mne-mir-125b-2 hsa-mir-125b-2
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
7 Homo sapiens GSM569190 TCCCTGAGACCCTAACTTGTGA ACGGGTTAGGCTCTTGGGAGCT up 3 0


Secondary structure

AAGAAAGAAAACATTGTTGCGCTCCTCTCAGTCCCTGAGACCCTAACTTGTGATGTTTACCGTTTAAATCCACGGGTTAGGCTCTTGGGAGCTGCGAGTCGTGCTTTTGCATCCTGGAAAT
-------------------------------TCCCTGAGACCCTAACTTGTGA 	8
-------------------------------TCCCTGAGACCCTAACTTGTG 	2
-----------------------------------------------------------------------ACGGGTTAGGCTCTTGGGAGC 	1

Overlaps with: MNEST027507 MNEST027570 MNEST027615 MNEST027719 MNEST028208 MNEST028301 MNEST028432 MNEST030210 MNEST030819
Overlaps with miRBase pre-miRNAs: cfa-mir-125b-1 ppy-mir-125b-1 ggo-mir-125b-1 age-mir-125b-1 sla-mir-125b mml-mir-125b-1 ptr-mir-125b-1 mne-mir-125b-1 hsa-mir-125b-1 lla-mir-125b-1
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
8 Homo sapiens GSM531974 TCCCTGAGACCCTAACTTGTGA ACGGGTTAGGCTCTTGGGAGCT up 3 0


Secondary structure

AAGAAAGAAAACATTGTTGCGCTCCTCTCAGTCCCTGAGACCCTAACTTGTGATGTTTACCGTTTAAATCCACGGGTTAGGCTCTTGGGAGCTGCGAGTCGTGCTTTTGCATCCTGGAAAT
-------------------------------TCCCTGAGACCCTAACTTGTGAT 	142
-------------------------------TCCCTGAGACCCTAACTTGTGA 	5179
-------------------------------TCCCTGAGACCCTAACTTGTG 	1596
-------------------------------TCCCTGAGACCCTAACTTGT 	1687
-------------------------------TCCCTGAGACCCTAACTTG 	115
--------------------------------CCCTGAGACCCTAACTTGTGAT 	14
---------------------------------CCTGAGACCCTAACTTGTGA 	60
---------------------------------CCTGAGACCCTAACTTGTG 	22
---------------------------------CCTGAGACCCTAACTTGTGAT 	1
----------------------------------CTGAGACCCTAACTTGTGA 	3
-----------------------------------------------------------------------ACGGGTTAGGCTCTTGGGAGC 	5
-----------------------------------------------------------------------ACGGGTTAGGCTCTTGGGAG 	9
-----------------------------------------------------------------------ACGGGTTAGGCTCTTGGGAGCT 	1

Overlaps with: MNEST027507 MNEST027570 MNEST027615 MNEST027719 MNEST028208 MNEST028301 MNEST028432 MNEST030210 MNEST030819
Overlaps with miRBase pre-miRNAs: cfa-mir-125b-1 ppy-mir-125b-1 ggo-mir-125b-1 age-mir-125b-1 sla-mir-125b mml-mir-125b-1 ptr-mir-125b-1 mne-mir-125b-1 hsa-mir-125b-1 lla-mir-125b-1
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
9 Homo sapiens GSM531974 TCCCTGAGACCCTAACTTGTGA ACAAGTCAGGCTCTTGGGACC up 2 1


Secondary structure

ATCAAACCAGACTTTTCCTAGTCCCTGAGACCCTAACTTGTGAGGTATTTTAGTAACATCACAAGTCAGGCTCTTGGGACCTAGGCGGAGGGGAACCAG
---------------------TCCCTGAGACCCTAACTTGTGAG 	11
---------------------TCCCTGAGACCCTAACTTGTGA 	5179
---------------------TCCCTGAGACCCTAACTTGTG 	1596
---------------------TCCCTGAGACCCTAACTTGT 	1687
---------------------TCCCTGAGACCCTAACTTG 	115
-----------------------CCTGAGACCCTAACTTGTGA 	60
-----------------------CCTGAGACCCTAACTTGTG 	22
------------------------CTGAGACCCTAACTTGTGA 	3
---------------------------------------------------------ATCACAAGTCAGGCTCTTGGGA 	5
---------------------------------------------------------ATCACAAGTCAGGCTCTTGGG 	9
---------------------------------------------------------ATCACAAGTCAGGCTCTTGG 	1
----------------------------------------------------------TCACAAGTCAGGCTCTTGGGA 	4
----------------------------------------------------------TCACAAGTCAGGCTCTTGG 	4
----------------------------------------------------------TCACAAGTCAGGCTCTTGGGAC 	3
----------------------------------------------------------TCACAAGTCAGGCTCTTGGG 	1
------------------------------------------------------------ACAAGTCAGGCTCTTGGGAC 	34
------------------------------------------------------------ACAAGTCAGGCTCTTGGGA 	34
------------------------------------------------------------ACAAGTCAGGCTCTTGGGACCT 	4
------------------------------------------------------------ACAAGTCAGGCTCTTGGGACC 	5

Overlaps with: MNEST027508 MNEST027571 MNEST027720 MNEST028209 MNEST028302 MNEST028433 MNEST030211 MNEST030820 MNEST031407 MNEST033972
Overlaps with miRBase pre-miRNAs: cfa-mir-125b-2 age-mir-125b-2 ppy-mir-125b-2 ggo-mir-125b-2 ssc-mir-125b-2 lca-mir-125b ptr-mir-125b-2 lla-mir-125b-2 mml-mir-125b-2 mne-mir-125b-2 hsa-mir-125b-2
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
10 Homo sapiens GSM494809_Normal_1 TCCCTGAGACCCTAACTTGTGA ACGGGTTAGGCTCTTGGGAGCT up 3 0


Secondary structure

AAGAAAGAAAACATTGTTGCGCTCCTCTCAGTCCCTGAGACCCTAACTTGTGATGTTTACCGTTTAAATCCACGGGTTAGGCTCTTGGGAGCTGCGAGTCGTGCTTTTGCATCCTGGAAAT
-------------------------------TCCCTGAGACCCTAACTTGTGA 	26
-------------------------------TCCCTGAGACCCTAACTTGTG 	19
-------------------------------TCCCTGAGACCCTAACTTGT 	6
-------------------------------TCCCTGAGACCCTAACTTGTGAT 	1
--------------------------------CCCTGAGACCCTAACTTGTGA 	2

Overlaps with: MNEST027507 MNEST027570 MNEST027615 MNEST027719 MNEST028208 MNEST028301 MNEST028432 MNEST030210 MNEST030819
Overlaps with miRBase pre-miRNAs: cfa-mir-125b-1 ppy-mir-125b-1 ggo-mir-125b-1 age-mir-125b-1 sla-mir-125b mml-mir-125b-1 ptr-mir-125b-1 mne-mir-125b-1 hsa-mir-125b-1 lla-mir-125b-1
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
11 Homo sapiens GSM494809_Normal_1 TCCCTGAGACCCTAACTTGTGA ACAAGTCAGGCTCTTGGGACC up 2 1


Secondary structure

ATCAAACCAGACTTTTCCTAGTCCCTGAGACCCTAACTTGTGAGGTATTTTAGTAACATCACAAGTCAGGCTCTTGGGACCTAGGCGGAGGGGAACCAG
---------------------TCCCTGAGACCCTAACTTGTGA 	26
---------------------TCCCTGAGACCCTAACTTGTG 	19
---------------------TCCCTGAGACCCTAACTTGT 	6
----------------------CCCTGAGACCCTAACTTGTGA 	2

Overlaps with: MNEST027508 MNEST027571 MNEST027720 MNEST028209 MNEST028302 MNEST028433 MNEST030211 MNEST030820 MNEST031407 MNEST033972
Overlaps with miRBase pre-miRNAs: cfa-mir-125b-2 age-mir-125b-2 ppy-mir-125b-2 ggo-mir-125b-2 ssc-mir-125b-2 lca-mir-125b ptr-mir-125b-2 lla-mir-125b-2 mml-mir-125b-2 mne-mir-125b-2 hsa-mir-125b-2
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
12 Homo sapiens GSM565978-9532 TCCCTGAGACCCTAACTTGTGA ACGGGTTAGGCTCTTGGGAGCT up 3 0


Secondary structure

AAGAAAGAAAACATTGTTGCGCTCCTCTCAGTCCCTGAGACCCTAACTTGTGATGTTTACCGTTTAAATCCACGGGTTAGGCTCTTGGGAGCTGCGAGTCGTGCTTTTGCATCCTGGAAAT
------------ATTGTTGCGCTCCTCTCAG 	1
-------------------------------TCCCTGAGACCCTAACTTGTGA 	313
-------------------------------TCCCTGAGACCCTAACTTGTG 	35
-------------------------------TCCCTGAGACCCTAACTTGTGAT 	4
-------------------------------TCCCTGAGACCCTAACTTGT 	3
----------------------------------CTGAGACCCTAACTTGTGA 	2
-----------------------------------------------------------------------ACGGGTTAGGCTCTTGGGAG 	2

Overlaps with: MNEST027507 MNEST027570 MNEST027615 MNEST027719 MNEST028208 MNEST028301 MNEST028432 MNEST030210 MNEST030819
Overlaps with miRBase pre-miRNAs: cfa-mir-125b-1 ppy-mir-125b-1 ggo-mir-125b-1 age-mir-125b-1 sla-mir-125b mml-mir-125b-1 ptr-mir-125b-1 mne-mir-125b-1 hsa-mir-125b-1 lla-mir-125b-1
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
13 Homo sapiens GSM565978-9532 TCCCTGAGACCCTAACTTGTGA ACAAGTCAGGCTCTTGGGACC up 2 1


Secondary structure

ATCAAACCAGACTTTTCCTAGTCCCTGAGACCCTAACTTGTGAGGTATTTTAGTAACATCACAAGTCAGGCTCTTGGGACCTAGGCGGAGGGGAACCAG
---------------------TCCCTGAGACCCTAACTTGTGA 	313
---------------------TCCCTGAGACCCTAACTTGTG 	35
---------------------TCCCTGAGACCCTAACTTGT 	3
------------------------CTGAGACCCTAACTTGTGA 	2
------------------------------------------------------------ACAAGTCAGGCTCTTGGGA 	3
------------------------------------------------------------ACAAGTCAGGCTCTTGGGAC 	1
------------------------------------------------------------ACAAGTCAGGCTCTTGGGACCTA 	1

Overlaps with: MNEST027508 MNEST027571 MNEST027720 MNEST028209 MNEST028302 MNEST028433 MNEST030211 MNEST030820 MNEST031407 MNEST033972
Overlaps with miRBase pre-miRNAs: cfa-mir-125b-2 age-mir-125b-2 ppy-mir-125b-2 ggo-mir-125b-2 ssc-mir-125b-2 lca-mir-125b ptr-mir-125b-2 lla-mir-125b-2 mml-mir-125b-2 mne-mir-125b-2 hsa-mir-125b-2
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
14 Homo sapiens GSM569186 TCCCTGAGACCCTAACTTGTGA ACGGGTTAGGCTCTTGGGAGCT up 3 0


Secondary structure

AAGAAAGAAAACATTGTTGCGCTCCTCTCAGTCCCTGAGACCCTAACTTGTGATGTTTACCGTTTAAATCCACGGGTTAGGCTCTTGGGAGCTGCGAGTCGTGCTTTTGCATCCTGGAAAT
-------------------------------TCCCTGAGACCCTAACTTGTG 	7
-------------------------------TCCCTGAGACCCTAACTTG 	2
-------------------------------TCCCTGAGACCCTAACTTGT 	13
-------------------------------TCCCTGAGACCCTAACTTGTGA 	55
-----------------------------------------------------------------------ACGGGTTAGGCTCTTGGGAG 	1

Overlaps with: MNEST027507 MNEST027570 MNEST027615 MNEST027719 MNEST028208 MNEST028301 MNEST028432 MNEST030210 MNEST030819
Overlaps with miRBase pre-miRNAs: cfa-mir-125b-1 ppy-mir-125b-1 ggo-mir-125b-1 age-mir-125b-1 sla-mir-125b mml-mir-125b-1 ptr-mir-125b-1 mne-mir-125b-1 hsa-mir-125b-1 lla-mir-125b-1
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
15 Homo sapiens GSM569186 TCCCTGAGACCCTAACTTGTGA ACAAGTCAGGCTCTTGGGACC up 2 1


Secondary structure

ATCAAACCAGACTTTTCCTAGTCCCTGAGACCCTAACTTGTGAGGTATTTTAGTAACATCACAAGTCAGGCTCTTGGGACCTAGGCGGAGGGGAACCAG
---------------------TCCCTGAGACCCTAACTTGTGAG 	2
---------------------TCCCTGAGACCCTAACTTGTG 	7
---------------------TCCCTGAGACCCTAACTTG 	2
---------------------TCCCTGAGACCCTAACTTGT 	13
---------------------TCCCTGAGACCCTAACTTGTGA 	55

Overlaps with: MNEST027508 MNEST027571 MNEST027720 MNEST028209 MNEST028302 MNEST028433 MNEST030211 MNEST030820 MNEST031407 MNEST033972
Overlaps with miRBase pre-miRNAs: cfa-mir-125b-2 age-mir-125b-2 ppy-mir-125b-2 ggo-mir-125b-2 ssc-mir-125b-2 lca-mir-125b ptr-mir-125b-2 lla-mir-125b-2 mml-mir-125b-2 mne-mir-125b-2 hsa-mir-125b-2
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
16 Homo sapiens GSM569188 TCCCTGAGACCCTAACTTGTGA ACGGGTTAGGCTCTTGGGAGCT up 3 0


Secondary structure

AAGAAAGAAAACATTGTTGCGCTCCTCTCAGTCCCTGAGACCCTAACTTGTGATGTTTACCGTTTAAATCCACGGGTTAGGCTCTTGGGAGCTGCGAGTCGTGCTTTTGCATCCTGGAAAT
-------------------------------TCCCTGAGACCCTAACTTGTGAT 	1
-------------------------------TCCCTGAGACCCTAACTTGTGA 	21
-------------------------------TCCCTGAGACCCTAACTTGTG 	3
-------------------------------TCCCTGAGACCCTAACTTGT 	3

Overlaps with: MNEST027507 MNEST027570 MNEST027615 MNEST027719 MNEST028208 MNEST028301 MNEST028432 MNEST030210 MNEST030819
Overlaps with miRBase pre-miRNAs: cfa-mir-125b-1 ppy-mir-125b-1 ggo-mir-125b-1 age-mir-125b-1 sla-mir-125b mml-mir-125b-1 ptr-mir-125b-1 mne-mir-125b-1 hsa-mir-125b-1 lla-mir-125b-1
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
17 Homo sapiens GSM569188 TCCCTGAGACCCTAACTTGTGA ACAAGTCAGGCTCTTGGGACC up 2 1


Secondary structure

ATCAAACCAGACTTTTCCTAGTCCCTGAGACCCTAACTTGTGAGGTATTTTAGTAACATCACAAGTCAGGCTCTTGGGACCTAGGCGGAGGGGAACCAG
---------------------TCCCTGAGACCCTAACTTGTGA 	21
---------------------TCCCTGAGACCCTAACTTGTG 	3
---------------------TCCCTGAGACCCTAACTTGT 	3

Overlaps with: MNEST027508 MNEST027571 MNEST027720 MNEST028209 MNEST028302 MNEST028433 MNEST030211 MNEST030820 MNEST031407 MNEST033972
Overlaps with miRBase pre-miRNAs: cfa-mir-125b-2 age-mir-125b-2 ppy-mir-125b-2 ggo-mir-125b-2 ssc-mir-125b-2 lca-mir-125b ptr-mir-125b-2 lla-mir-125b-2 mml-mir-125b-2 mne-mir-125b-2 hsa-mir-125b-2
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
18 Homo sapiens GSM569187 TCCCTGAGACCCTAACTTGTGA ACGGGTTAGGCTCTTGGGAGCT up 3 0


Secondary structure

AAGAAAGAAAACATTGTTGCGCTCCTCTCAGTCCCTGAGACCCTAACTTGTGATGTTTACCGTTTAAATCCACGGGTTAGGCTCTTGGGAGCTGCGAGTCGTGCTTTTGCATCCTGGAAAT
-------------------------------TCCCTGAGACCCTAACTTGTG 	8
-------------------------------TCCCTGAGACCCTAACTTGTGA 	28
-------------------------------TCCCTGAGACCCTAACTTGT 	5
-----------------------------------------------------------------------ACGGGTTAGGCTCTTGGGAG 	1

Overlaps with: MNEST027507 MNEST027570 MNEST027615 MNEST027719 MNEST028208 MNEST028301 MNEST028432 MNEST030210 MNEST030819
Overlaps with miRBase pre-miRNAs: cfa-mir-125b-1 ppy-mir-125b-1 ggo-mir-125b-1 age-mir-125b-1 sla-mir-125b mml-mir-125b-1 ptr-mir-125b-1 mne-mir-125b-1 hsa-mir-125b-1 lla-mir-125b-1
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
19 Homo sapiens GSM569187 TCCCTGAGACCCTAACTTGTGA ACAAGTCAGGCTCTTGGGACC up 2 1


Secondary structure

ATCAAACCAGACTTTTCCTAGTCCCTGAGACCCTAACTTGTGAGGTATTTTAGTAACATCACAAGTCAGGCTCTTGGGACCTAGGCGGAGGGGAACCAG
---------------------TCCCTGAGACCCTAACTTGTG 	8
---------------------TCCCTGAGACCCTAACTTGTGA 	28
---------------------TCCCTGAGACCCTAACTTGT 	5

Overlaps with: MNEST027508 MNEST027571 MNEST027720 MNEST028209 MNEST028302 MNEST028433 MNEST030211 MNEST030820 MNEST031407 MNEST033972
Overlaps with miRBase pre-miRNAs: cfa-mir-125b-2 age-mir-125b-2 ppy-mir-125b-2 ggo-mir-125b-2 ssc-mir-125b-2 lca-mir-125b ptr-mir-125b-2 lla-mir-125b-2 mml-mir-125b-2 mne-mir-125b-2 hsa-mir-125b-2
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
20 Homo sapiens GSM531982 TCCCTGAGACCCTAACTTGTGA ACGGGTTAGGCTCTTGGGAGCT up 3 0


Secondary structure

AAGAAAGAAAACATTGTTGCGCTCCTCTCAGTCCCTGAGACCCTAACTTGTGATGTTTACCGTTTAAATCCACGGGTTAGGCTCTTGGGAGCTGCGAGTCGTGCTTTTGCATCCTGGAAAT
-------------------------------TCCCTGAGACCCTAACTTGTGAT 	7
-------------------------------TCCCTGAGACCCTAACTTGTGA 	665
-------------------------------TCCCTGAGACCCTAACTTGTG 	282
-------------------------------TCCCTGAGACCCTAACTTGT 	275
-------------------------------TCCCTGAGACCCTAACTTG 	18
---------------------------------CCTGAGACCCTAACTTGTGA 	5
---------------------------------CCTGAGACCCTAACTTGTG 	4
---------------------------------CCTGAGACCCTAACTTGTGAT 	1

Overlaps with: MNEST027507 MNEST027570 MNEST027615 MNEST027719 MNEST028208 MNEST028301 MNEST028432 MNEST030210 MNEST030819
Overlaps with miRBase pre-miRNAs: cfa-mir-125b-1 ppy-mir-125b-1 ggo-mir-125b-1 age-mir-125b-1 sla-mir-125b mml-mir-125b-1 ptr-mir-125b-1 mne-mir-125b-1 hsa-mir-125b-1 lla-mir-125b-1
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
21 Homo sapiens GSM531982 TCCCTGAGACCCTAACTTGTGA ACAAGTCAGGCTCTTGGGACC up 2 1


Secondary structure

ATCAAACCAGACTTTTCCTAGTCCCTGAGACCCTAACTTGTGAGGTATTTTAGTAACATCACAAGTCAGGCTCTTGGGACCTAGGCGGAGGGGAACCAG
--CAAACCAGACTTTTCCTAG 	1
---------------------TCCCTGAGACCCTAACTTGTGA 	665
---------------------TCCCTGAGACCCTAACTTGTG 	282
---------------------TCCCTGAGACCCTAACTTGT 	275
---------------------TCCCTGAGACCCTAACTTG 	18
---------------------TCCCTGAGACCCTAACTTGTGAG 	1
-----------------------CCTGAGACCCTAACTTGTGA 	5
-----------------------CCTGAGACCCTAACTTGTG 	4
---------------------------------------------------------ATCACAAGTCAGGCTCTTGGG 	6
---------------------------------------------------------ATCACAAGTCAGGCTCTTGG 	2
---------------------------------------------------------ATCACAAGTCAGGCTCTTG 	3
---------------------------------------------------------ATCACAAGTCAGGCTCTTGGGA 	1
----------------------------------------------------------TCACAAGTCAGGCTCTTGGG 	6
----------------------------------------------------------TCACAAGTCAGGCTCTTGG 	8
----------------------------------------------------------TCACAAGTCAGGCTCTTGGGAC 	2
------------------------------------------------------------ACAAGTCAGGCTCTTGGGAC 	13
------------------------------------------------------------ACAAGTCAGGCTCTTGGGA 	13
-------------------------------------------------------------CAAGTCAGGCTCTTGGGAC 	1

Overlaps with: MNEST027508 MNEST027571 MNEST027720 MNEST028209 MNEST028302 MNEST028433 MNEST030211 MNEST030820 MNEST031407 MNEST033972
Overlaps with miRBase pre-miRNAs: cfa-mir-125b-2 age-mir-125b-2 ppy-mir-125b-2 ggo-mir-125b-2 ssc-mir-125b-2 lca-mir-125b ptr-mir-125b-2 lla-mir-125b-2 mml-mir-125b-2 mne-mir-125b-2 hsa-mir-125b-2
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
22 Homo sapiens GSM494811_K562 TCCCTGAGACCCTAACTTGTGA ACGGGTTAGGCTCTTGGGAGCT up 3 0


Secondary structure

AAGAAAGAAAACATTGTTGCGCTCCTCTCAGTCCCTGAGACCCTAACTTGTGATGTTTACCGTTTAAATCCACGGGTTAGGCTCTTGGGAGCTGCGAGTCGTGCTTTTGCATCCTGGAAAT
-------------------------------TCCCTGAGACCCTAACTTGTGA 	51
-------------------------------TCCCTGAGACCCTAACTTGT 	4
-------------------------------TCCCTGAGACCCTAACTTGTG 	3
-------------------------------TCCCTGAGACCCTAACTTG 	1

Overlaps with: MNEST027507 MNEST027570 MNEST027615 MNEST027719 MNEST028208 MNEST028301 MNEST028432 MNEST030210 MNEST030819
Overlaps with miRBase pre-miRNAs: cfa-mir-125b-1 ppy-mir-125b-1 ggo-mir-125b-1 age-mir-125b-1 sla-mir-125b mml-mir-125b-1 ptr-mir-125b-1 mne-mir-125b-1 hsa-mir-125b-1 lla-mir-125b-1
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
23 Homo sapiens GSM494811_K562 TCCCTGAGACCCTAACTTGTGA ACAAGTCAGGCTCTTGGGACC up 2 1


Secondary structure

ATCAAACCAGACTTTTCCTAGTCCCTGAGACCCTAACTTGTGAGGTATTTTAGTAACATCACAAGTCAGGCTCTTGGGACCTAGGCGGAGGGGAACCAG
---------------------TCCCTGAGACCCTAACTTGTGA 	51
---------------------TCCCTGAGACCCTAACTTGT 	4
---------------------TCCCTGAGACCCTAACTTGTG 	3
---------------------TCCCTGAGACCCTAACTTG 	1
------------------------------------------------------------ACAAGTCAGGCTCTTGGGACCT 	1

Overlaps with: MNEST027508 MNEST027571 MNEST027720 MNEST028209 MNEST028302 MNEST028433 MNEST030211 MNEST030820 MNEST031407 MNEST033972
Overlaps with miRBase pre-miRNAs: cfa-mir-125b-2 age-mir-125b-2 ppy-mir-125b-2 ggo-mir-125b-2 ssc-mir-125b-2 lca-mir-125b ptr-mir-125b-2 lla-mir-125b-2 mml-mir-125b-2 mne-mir-125b-2 hsa-mir-125b-2
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
24 Homo sapiens GSM531978 TCCCTGAGACCCTAACTTGTGA ACGGGTTAGGCTCTTGGGAGCT up 3 0


Secondary structure

AAGAAAGAAAACATTGTTGCGCTCCTCTCAGTCCCTGAGACCCTAACTTGTGATGTTTACCGTTTAAATCCACGGGTTAGGCTCTTGGGAGCTGCGAGTCGTGCTTTTGCATCCTGGAAAT
-------------------------------TCCCTGAGACCCTAACTTGTGAT 	88
-------------------------------TCCCTGAGACCCTAACTTGTGA 	6154
-------------------------------TCCCTGAGACCCTAACTTGTG 	1946
-------------------------------TCCCTGAGACCCTAACTTGT 	2437
-------------------------------TCCCTGAGACCCTAACTTG 	147
--------------------------------CCCTGAGACCCTAACTTGTGA 	7
--------------------------------CCCTGAGACCCTAACTTGT 	4
--------------------------------CCCTGAGACCCTAACTTGTGAT 	3
---------------------------------CCTGAGACCCTAACTTGTGA 	146
---------------------------------CCTGAGACCCTAACTTGTG 	25
---------------------------------CCTGAGACCCTAACTTGTGAT 	6
----------------------------------CTGAGACCCTAACTTGTGA 	3
----------------------------------CTGAGACCCTAACTTGTGAT 	1
----------------------------------------------------------------------CACGGGTTAGGCTCTTGGGAG 	3
-----------------------------------------------------------------------ACGGGTTAGGCTCTTGGGAGCT 	13
-----------------------------------------------------------------------ACGGGTTAGGCTCTTGGGAGC 	22
-----------------------------------------------------------------------ACGGGTTAGGCTCTTGGGAG 	36
-----------------------------------------------------------------------ACGGGTTAGGCTCTTGGGA 	10
---------------------------------------------------------------------------------------------GCGAGTCGTGCTTTTGCATC 	1

Overlaps with: MNEST027507 MNEST027570 MNEST027615 MNEST027719 MNEST028208 MNEST028301 MNEST028432 MNEST030210 MNEST030819
Overlaps with miRBase pre-miRNAs: cfa-mir-125b-1 ppy-mir-125b-1 ggo-mir-125b-1 age-mir-125b-1 sla-mir-125b mml-mir-125b-1 ptr-mir-125b-1 mne-mir-125b-1 hsa-mir-125b-1 lla-mir-125b-1
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
25 Homo sapiens GSM531978 TCCCTGAGACCCTAACTTGTGA ACAAGTCAGGCTCTTGGGACC up 2 1


Secondary structure

ATCAAACCAGACTTTTCCTAGTCCCTGAGACCCTAACTTGTGAGGTATTTTAGTAACATCACAAGTCAGGCTCTTGGGACCTAGGCGGAGGGGAACCAG
---------------------TCCCTGAGACCCTAACTTGTGAG 	9
---------------------TCCCTGAGACCCTAACTTGTGA 	6154
---------------------TCCCTGAGACCCTAACTTGTG 	1946
---------------------TCCCTGAGACCCTAACTTGT 	2437
---------------------TCCCTGAGACCCTAACTTG 	147
----------------------CCCTGAGACCCTAACTTGTGA 	7
----------------------CCCTGAGACCCTAACTTGT 	4
-----------------------CCTGAGACCCTAACTTGTGA 	146
-----------------------CCTGAGACCCTAACTTGTG 	25
------------------------CTGAGACCCTAACTTGTGA 	3
---------------------------------------------------------ATCACAAGTCAGGCTCTTGG 	10
---------------------------------------------------------ATCACAAGTCAGGCTCTTGGG 	2
---------------------------------------------------------ATCACAAGTCAGGCTCTTG 	2
----------------------------------------------------------TCACAAGTCAGGCTCTTGGGAC 	8
----------------------------------------------------------TCACAAGTCAGGCTCTTGGGA 	6
----------------------------------------------------------TCACAAGTCAGGCTCTTGG 	4
----------------------------------------------------------TCACAAGTCAGGCTCTTGGG 	1
------------------------------------------------------------ACAAGTCAGGCTCTTGGGAC 	128
------------------------------------------------------------ACAAGTCAGGCTCTTGGGA 	69
------------------------------------------------------------ACAAGTCAGGCTCTTGGGACCT 	6
------------------------------------------------------------ACAAGTCAGGCTCTTGGGACC 	6
-------------------------------------------------------------CAAGTCAGGCTCTTGGGAC 	1

Overlaps with: MNEST027508 MNEST027571 MNEST027720 MNEST028209 MNEST028302 MNEST028433 MNEST030211 MNEST030820 MNEST031407 MNEST033972
Overlaps with miRBase pre-miRNAs: cfa-mir-125b-2 age-mir-125b-2 ppy-mir-125b-2 ggo-mir-125b-2 ssc-mir-125b-2 lca-mir-125b ptr-mir-125b-2 lla-mir-125b-2 mml-mir-125b-2 mne-mir-125b-2 hsa-mir-125b-2
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
26 Homo sapiens GSM651907 TCCCTGAGACCCTAACTTGTGA ACGGGTTAGGCTCTTGGGAGCT up 3 0


Secondary structure

AAGAAAGAAAACATTGTTGCGCTCCTCTCAGTCCCTGAGACCCTAACTTGTGATGTTTACCGTTTAAATCCACGGGTTAGGCTCTTGGGAGCTGCGAGTCGTGCTTTTGCATCCTGGAAAT
-------------------------------TCCCTGAGACCCTAACTTGTGAT 	165
-------------------------------TCCCTGAGACCCTAACTTGTGA 	10725
-------------------------------TCCCTGAGACCCTAACTTGTG 	6862
-------------------------------TCCCTGAGACCCTAACTTGT 	2490
-------------------------------TCCCTGAGACCCTAACTTG 	1369
--------------------------------CCCTGAGACCCTAACTTGTGAT 	10
--------------------------------CCCTGAGACCCTAACTTGTGA 	18
--------------------------------CCCTGAGACCCTAACTTGTG 	7
--------------------------------CCCTGAGACCCTAACTTGT 	5
---------------------------------CCTGAGACCCTAACTTGTGAT 	9
---------------------------------CCTGAGACCCTAACTTGTGA 	350
---------------------------------CCTGAGACCCTAACTTGTG 	111
----------------------------------CTGAGACCCTAACTTGTGA 	38
----------------------------------CTGAGACCCTAACTTGTGAT 	2
-----------------------------------TGAGACCCTAACTTGTGAT 	3
----------------------------------------------------------------------CACGGGTTAGGCTCTTGGGAG 	5
----------------------------------------------------------------------CACGGGTTAGGCTCTTGGGA 	2
----------------------------------------------------------------------CACGGGTTAGGCTCTTGGGAGC 	2
-----------------------------------------------------------------------ACGGGTTAGGCTCTTGGGAGC 	85
-----------------------------------------------------------------------ACGGGTTAGGCTCTTGGGAG 	162
-----------------------------------------------------------------------ACGGGTTAGGCTCTTGGGA 	31
-----------------------------------------------------------------------ACGGGTTAGGCTCTTGGGAGCT 	5
------------------------------------------------------------------------CGGGTTAGGCTCTTGGGAG 	1
---------------------------------------------------------------------------------------------GCGAGTCGTGCTTTTGCATCC 	1

Overlaps with: MNEST027507 MNEST027570 MNEST027615 MNEST027719 MNEST028208 MNEST028301 MNEST028432 MNEST030210 MNEST030819
Overlaps with miRBase pre-miRNAs: cfa-mir-125b-1 ppy-mir-125b-1 ggo-mir-125b-1 age-mir-125b-1 sla-mir-125b mml-mir-125b-1 ptr-mir-125b-1 mne-mir-125b-1 hsa-mir-125b-1 lla-mir-125b-1
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
27 Homo sapiens GSM651907 TCCCTGAGACCCTAACTTGTGA ACAAGTCAGGCTCTTGGGACC up 2 1


Secondary structure

ATCAAACCAGACTTTTCCTAGTCCCTGAGACCCTAACTTGTGAGGTATTTTAGTAACATCACAAGTCAGGCTCTTGGGACCTAGGCGGAGGGGAACCAG
--CAAACCAGACTTTTCCTAG 	1
---------------------TCCCTGAGACCCTAACTTGTGAG 	19
---------------------TCCCTGAGACCCTAACTTGTGA 	10725
---------------------TCCCTGAGACCCTAACTTGTG 	6862
---------------------TCCCTGAGACCCTAACTTGT 	2490
---------------------TCCCTGAGACCCTAACTTG 	1369
---------------------TCCCTGAGACCCTAACTTGTGAGG 	2
----------------------CCCTGAGACCCTAACTTGTGA 	18
----------------------CCCTGAGACCCTAACTTGTG 	7
----------------------CCCTGAGACCCTAACTTGT 	5
-----------------------CCTGAGACCCTAACTTGTGA 	350
-----------------------CCTGAGACCCTAACTTGTG 	111
------------------------CTGAGACCCTAACTTGTGA 	38
------------------------------------------AGGTATTTTAGTAACATCA 	2
---------------------------------------------------------ATCACAAGTCAGGCTCTTGG 	22
---------------------------------------------------------ATCACAAGTCAGGCTCTTG 	28
---------------------------------------------------------ATCACAAGTCAGGCTCTTGGG 	2
---------------------------------------------------------ATCACAAGTCAGGCTCTTGGGA 	1
----------------------------------------------------------TCACAAGTCAGGCTCTTGG 	6
----------------------------------------------------------TCACAAGTCAGGCTCTTGGGA 	1
------------------------------------------------------------ACAAGTCAGGCTCTTGGGAC 	11
------------------------------------------------------------ACAAGTCAGGCTCTTGGGA 	18
------------------------------------------------------------ACAAGTCAGGCTCTTGGGACCT 	4
------------------------------------------------------------ACAAGTCAGGCTCTTGGGACC 	2
-------------------------------------------------------------CAAGTCAGGCTCTTGGGAC 	2

Overlaps with: MNEST027508 MNEST027571 MNEST027720 MNEST028209 MNEST028302 MNEST028433 MNEST030211 MNEST030820 MNEST031407 MNEST033972
Overlaps with miRBase pre-miRNAs: cfa-mir-125b-2 age-mir-125b-2 ppy-mir-125b-2 ggo-mir-125b-2 ssc-mir-125b-2 lca-mir-125b ptr-mir-125b-2 lla-mir-125b-2 mml-mir-125b-2 mne-mir-125b-2 hsa-mir-125b-2
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
28 Homo sapiens GSM569189 TCCCTGAGACCCTAACTTGTGA ACGGGTTAGGCTCTTGGGAGCT up 3 0


Secondary structure

AAGAAAGAAAACATTGTTGCGCTCCTCTCAGTCCCTGAGACCCTAACTTGTGATGTTTACCGTTTAAATCCACGGGTTAGGCTCTTGGGAGCTGCGAGTCGTGCTTTTGCATCCTGGAAAT
-------------------------------TCCCTGAGACCCTAACTTG 	1
-------------------------------TCCCTGAGACCCTAACTTGTG 	5
-------------------------------TCCCTGAGACCCTAACTTGTGAT 	3
-------------------------------TCCCTGAGACCCTAACTTGTGA 	38
--------------------------------CCCTGAGACCCTAACTTGTGA 	1
-----------------------------------------------------------------------ACGGGTTAGGCTCTTGGGAGCT 	1

Overlaps with: MNEST027507 MNEST027570 MNEST027615 MNEST027719 MNEST028208 MNEST028301 MNEST028432 MNEST030210 MNEST030819
Overlaps with miRBase pre-miRNAs: cfa-mir-125b-1 ppy-mir-125b-1 ggo-mir-125b-1 age-mir-125b-1 sla-mir-125b mml-mir-125b-1 ptr-mir-125b-1 mne-mir-125b-1 hsa-mir-125b-1 lla-mir-125b-1
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
29 Homo sapiens GSM569189 TCCCTGAGACCCTAACTTGTGA ACAAGTCAGGCTCTTGGGACC up 2 1


Secondary structure

ATCAAACCAGACTTTTCCTAGTCCCTGAGACCCTAACTTGTGAGGTATTTTAGTAACATCACAAGTCAGGCTCTTGGGACCTAGGCGGAGGGGAACCAG
---------------------TCCCTGAGACCCTAACTTG 	1
---------------------TCCCTGAGACCCTAACTTGTGAG 	1
---------------------TCCCTGAGACCCTAACTTGTG 	5
---------------------TCCCTGAGACCCTAACTTGTGA 	38
----------------------CCCTGAGACCCTAACTTGTGA 	1

Overlaps with: MNEST027508 MNEST027571 MNEST027720 MNEST028209 MNEST028302 MNEST028433 MNEST030211 MNEST030820 MNEST031407 MNEST033972
Overlaps with miRBase pre-miRNAs: cfa-mir-125b-2 age-mir-125b-2 ppy-mir-125b-2 ggo-mir-125b-2 ssc-mir-125b-2 lca-mir-125b ptr-mir-125b-2 lla-mir-125b-2 mml-mir-125b-2 mne-mir-125b-2 hsa-mir-125b-2
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
30 Homo sapiens GSM494812_HL60 TCCCTGAGACCCTAACTTGTGA ACGGGTTAGGCTCTTGGGAGCT up 3 0


Secondary structure

AAGAAAGAAAACATTGTTGCGCTCCTCTCAGTCCCTGAGACCCTAACTTGTGATGTTTACCGTTTAAATCCACGGGTTAGGCTCTTGGGAGCTGCGAGTCGTGCTTTTGCATCCTGGAAAT
-------------------------------TCCCTGAGACCCTAACTTGTGA 	25
-------------------------------TCCCTGAGACCCTAACTTGTG 	2
-------------------------------TCCCTGAGACCCTAACTTGT 	2
---------------------------------CCTGAGACCCTAACTTGTG 	1

Overlaps with: MNEST027507 MNEST027570 MNEST027615 MNEST027719 MNEST028208 MNEST028301 MNEST028432 MNEST030210 MNEST030819
Overlaps with miRBase pre-miRNAs: cfa-mir-125b-1 ppy-mir-125b-1 ggo-mir-125b-1 age-mir-125b-1 sla-mir-125b mml-mir-125b-1 ptr-mir-125b-1 mne-mir-125b-1 hsa-mir-125b-1 lla-mir-125b-1
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
31 Homo sapiens GSM494812_HL60 TCCCTGAGACCCTAACTTGTGA ACAAGTCAGGCTCTTGGGACC up 2 1


Secondary structure

ATCAAACCAGACTTTTCCTAGTCCCTGAGACCCTAACTTGTGAGGTATTTTAGTAACATCACAAGTCAGGCTCTTGGGACCTAGGCGGAGGGGAACCAG
---------------------TCCCTGAGACCCTAACTTGTGA 	25
---------------------TCCCTGAGACCCTAACTTGTG 	2
---------------------TCCCTGAGACCCTAACTTGT 	2
-----------------------CCTGAGACCCTAACTTGTG 	1
---------------------------------------------------------ATCACAAGTCAGGCTCTTGGGAC 	1
------------------------------------------------------------ACAAGTCAGGCTCTTGGGACC 	1

Overlaps with: MNEST027508 MNEST027571 MNEST027720 MNEST028209 MNEST028302 MNEST028433 MNEST030211 MNEST030820 MNEST031407 MNEST033972
Overlaps with miRBase pre-miRNAs: cfa-mir-125b-2 age-mir-125b-2 ppy-mir-125b-2 ggo-mir-125b-2 ssc-mir-125b-2 lca-mir-125b ptr-mir-125b-2 lla-mir-125b-2 mml-mir-125b-2 mne-mir-125b-2 hsa-mir-125b-2
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
32 Homo sapiens GSM531986-13294 TCCCTGAGACCCTAACTTGTGA ACGGGTTAGGCTCTTGGGAGCT up 3 0


Secondary structure

AAGAAAGAAAACATTGTTGCGCTCCTCTCAGTCCCTGAGACCCTAACTTGTGATGTTTACCGTTTAAATCCACGGGTTAGGCTCTTGGGAGCTGCGAGTCGTGCTTTTGCATCCTGGAAAT
------------ATTGTTGCGCTCCTCTCAG 	1
-------------------------------TCCCTGAGACCCTAACTTGTGAT 	44
-------------------------------TCCCTGAGACCCTAACTTGTGA 	3511
-------------------------------TCCCTGAGACCCTAACTTGTG 	1358
-------------------------------TCCCTGAGACCCTAACTTGT 	717
-------------------------------TCCCTGAGACCCTAACTTG 	297
-------------------------------TCCCTGAGACCCTAACTTGTGATG 	1
--------------------------------CCCTGAGACCCTAACTTGTGA 	7
--------------------------------CCCTGAGACCCTAACTTGTGAT 	1
--------------------------------CCCTGAGACCCTAACTTGTG 	1
---------------------------------CCTGAGACCCTAACTTGTGA 	31
---------------------------------CCTGAGACCCTAACTTGTG 	11
---------------------------------CCTGAGACCCTAACTTGTGAT 	3
----------------------------------CTGAGACCCTAACTTGTGA 	1
--------------------------------------------------------------------TCCACGGGTTAGGCTCTTGGGA 	2
-----------------------------------------------------------------------ACGGGTTAGGCTCTTGGGAG 	7
-----------------------------------------------------------------------ACGGGTTAGGCTCTTGGGAGC 	5
-----------------------------------------------------------------------ACGGGTTAGGCTCTTGGGAGCT 	1

Overlaps with: MNEST027507 MNEST027570 MNEST027615 MNEST027719 MNEST028208 MNEST028301 MNEST028432 MNEST030210 MNEST030819
Overlaps with miRBase pre-miRNAs: cfa-mir-125b-1 ppy-mir-125b-1 ggo-mir-125b-1 age-mir-125b-1 sla-mir-125b mml-mir-125b-1 ptr-mir-125b-1 mne-mir-125b-1 hsa-mir-125b-1 lla-mir-125b-1
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
33 Homo sapiens GSM531986-13294 TCCCTGAGACCCTAACTTGTGA ACAAGTCAGGCTCTTGGGACC up 2 1


Secondary structure

ATCAAACCAGACTTTTCCTAGTCCCTGAGACCCTAACTTGTGAGGTATTTTAGTAACATCACAAGTCAGGCTCTTGGGACCTAGGCGGAGGGGAACCAG
---------------------TCCCTGAGACCCTAACTTGTGA 	3511
---------------------TCCCTGAGACCCTAACTTGTG 	1358
---------------------TCCCTGAGACCCTAACTTGT 	717
---------------------TCCCTGAGACCCTAACTTG 	297
---------------------TCCCTGAGACCCTAACTTGTGAG 	2
----------------------CCCTGAGACCCTAACTTGTGA 	7
----------------------CCCTGAGACCCTAACTTGTG 	1
-----------------------CCTGAGACCCTAACTTGTGA 	31
-----------------------CCTGAGACCCTAACTTGTG 	11
------------------------CTGAGACCCTAACTTGTGA 	1
------------------------------------------------------AACATCACAAGTCAGGCTCTTGGG 	1
---------------------------------------------------------ATCACAAGTCAGGCTCTTGG 	2
---------------------------------------------------------ATCACAAGTCAGGCTCTTG 	1
---------------------------------------------------------ATCACAAGTCAGGCTCTTGGGA 	1
----------------------------------------------------------TCACAAGTCAGGCTCTTGG 	7
------------------------------------------------------------ACAAGTCAGGCTCTTGGGAC 	15
------------------------------------------------------------ACAAGTCAGGCTCTTGGGA 	19
------------------------------------------------------------ACAAGTCAGGCTCTTGGGACCT 	5
------------------------------------------------------------ACAAGTCAGGCTCTTGGGACC 	2

Overlaps with: MNEST027508 MNEST027571 MNEST027720 MNEST028209 MNEST028302 MNEST028433 MNEST030211 MNEST030820 MNEST031407 MNEST033972
Overlaps with miRBase pre-miRNAs: cfa-mir-125b-2 age-mir-125b-2 ppy-mir-125b-2 ggo-mir-125b-2 ssc-mir-125b-2 lca-mir-125b ptr-mir-125b-2 lla-mir-125b-2 mml-mir-125b-2 mne-mir-125b-2 hsa-mir-125b-2
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
34 Homo sapiens GSM531975 TCCCTGAGACCCTAACTTGTGA ACGGGTTAGGCTCTTGGGAGCT up 3 0


Secondary structure

AAGAAAGAAAACATTGTTGCGCTCCTCTCAGTCCCTGAGACCCTAACTTGTGATGTTTACCGTTTAAATCCACGGGTTAGGCTCTTGGGAGCTGCGAGTCGTGCTTTTGCATCCTGGAAAT
-------------------------------TCCCTGAGACCCTAACTTGTGAT 	245
-------------------------------TCCCTGAGACCCTAACTTGTGA 	13088
-------------------------------TCCCTGAGACCCTAACTTGTG 	4386
-------------------------------TCCCTGAGACCCTAACTTGT 	2262
-------------------------------TCCCTGAGACCCTAACTTG 	721
-------------------------------TCCCTGAGACCCTAACTTGTGATG 	1
--------------------------------CCCTGAGACCCTAACTTGTGAT 	4
--------------------------------CCCTGAGACCCTAACTTGTGA 	3
--------------------------------CCCTGAGACCCTAACTTGT 	1
---------------------------------CCTGAGACCCTAACTTGTGA 	120
---------------------------------CCTGAGACCCTAACTTGTG 	18
---------------------------------CCTGAGACCCTAACTTGTGAT 	4
-----------------------------------------------------------------------ACGGGTTAGGCTCTTGGGAGC 	6
-----------------------------------------------------------------------ACGGGTTAGGCTCTTGGGAG 	5

Overlaps with: MNEST027507 MNEST027570 MNEST027615 MNEST027719 MNEST028208 MNEST028301 MNEST028432 MNEST030210 MNEST030819
Overlaps with miRBase pre-miRNAs: cfa-mir-125b-1 ppy-mir-125b-1 ggo-mir-125b-1 age-mir-125b-1 sla-mir-125b mml-mir-125b-1 ptr-mir-125b-1 mne-mir-125b-1 hsa-mir-125b-1 lla-mir-125b-1
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
35 Homo sapiens GSM531975 TCCCTGAGACCCTAACTTGTGA ACAAGTCAGGCTCTTGGGACC up 2 1


Secondary structure

ATCAAACCAGACTTTTCCTAGTCCCTGAGACCCTAACTTGTGAGGTATTTTAGTAACATCACAAGTCAGGCTCTTGGGACCTAGGCGGAGGGGAACCAG
--CAAACCAGACTTTTCCTAG 	1
---------------------TCCCTGAGACCCTAACTTGTGAG 	24
---------------------TCCCTGAGACCCTAACTTGTGA 	13088
---------------------TCCCTGAGACCCTAACTTGTG 	4386
---------------------TCCCTGAGACCCTAACTTGT 	2262
---------------------TCCCTGAGACCCTAACTTG 	721
----------------------CCCTGAGACCCTAACTTGTGA 	3
----------------------CCCTGAGACCCTAACTTGT 	1
-----------------------CCTGAGACCCTAACTTGTGA 	120
-----------------------CCTGAGACCCTAACTTGTG 	18
------------------------------------------AGGTATTTTAGTAACATCA 	1
------------------------------------------------------AACATCACAAGTCAGGCTCTTGG 	1
---------------------------------------------------------ATCACAAGTCAGGCTCTTGGG 	7
---------------------------------------------------------ATCACAAGTCAGGCTCTTGG 	15
---------------------------------------------------------ATCACAAGTCAGGCTCTTG 	15
---------------------------------------------------------ATCACAAGTCAGGCTCTTGGGA 	2
---------------------------------------------------------ATCACAAGTCAGGCTCTTGGGAC 	1
----------------------------------------------------------TCACAAGTCAGGCTCTTGG 	7
----------------------------------------------------------TCACAAGTCAGGCTCTTGGGA 	6
----------------------------------------------------------TCACAAGTCAGGCTCTTGGG 	1
----------------------------------------------------------TCACAAGTCAGGCTCTTGGGAC 	1
------------------------------------------------------------ACAAGTCAGGCTCTTGGGAC 	34
------------------------------------------------------------ACAAGTCAGGCTCTTGGGA 	35
------------------------------------------------------------ACAAGTCAGGCTCTTGGGACCT 	5
------------------------------------------------------------ACAAGTCAGGCTCTTGGGACC 	2
------------------------------------------------------------ACAAGTCAGGCTCTTGGGACCTA 	2

Overlaps with: MNEST027508 MNEST027571 MNEST027720 MNEST028209 MNEST028302 MNEST028433 MNEST030211 MNEST030820 MNEST031407 MNEST033972
Overlaps with miRBase pre-miRNAs: cfa-mir-125b-2 age-mir-125b-2 ppy-mir-125b-2 ggo-mir-125b-2 ssc-mir-125b-2 lca-mir-125b ptr-mir-125b-2 lla-mir-125b-2 mml-mir-125b-2 mne-mir-125b-2 hsa-mir-125b-2
HuntMi prediction: true miRNA