miRNEST 2.0, an integrative microRNA resource :: deep sequencing predictions

Please select library, species and/or miRNA sequence.

selected mature miRNA sequence: TCGGACCAGGCTTCATCCCCC

selected species: Arabidopsis thaliana

23 records found

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
1	Arabidopsis thaliana	GSM304282	TCGGACCAGGCTTCATCCCCC	GGAATGTTGTTTGGATCGAGG	down	4	0

Secondary structure

TGATAATCATGAAGAGGCTATTTCTGTTGTGGGGAATGTTGTTTGGATCGAGGATATCATAAACGCATACACATGTTTATATGTTATGATGCATTATATGACTGATGTAATGTACATATATATACATACATGCCACATGGTATCGTCGGACCAGGCTTCATCCCCCTCAACATGTTAATTGCCTTCAATCACTCT
-------------------------------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATCCCCC 	49
-------------------------------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATCCCC 	2
-------------------------------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATCCC 	2

Overlaps with: MNEST040031 MNEST046944
Overlaps with miRBase pre-miRNAs: ath-MIR165b
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
2	Arabidopsis thaliana	GSM304282	TCGGACCAGGCTTCATCCCCC	GGAATGTTGTCTGGATCGAGG	down	4	0

Secondary structure

TTTCAGTTGAGGGGAATGTTGTCTGGATCGAGGATATTATAGATATATACATGTGTATGTTAATGATTCAAGTGATCATAGAGAGTATCCTCGGACCAGGCTTCATCCCCCCCAACATGT
------------GGAATGTTGTCTGGATCGAGG 	1
-------------GAATGTTGTCTGGATCGAGGA 	1
-------------GAATGTTGTCTGGATCGAGG 	1
---------------------------------------------------------------------------------------TCCTCGGACCAGGCTTCATCC 	3
-----------------------------------------------------------------------------------------CTCGGACCAGGCTTCATCCCCC 	1
-----------------------------------------------------------------------------------------CTCGGACCAGGCTTCATCCCC 	1
------------------------------------------------------------------------------------------TCGGACCAGGCTTCATCCCCC 	49
------------------------------------------------------------------------------------------TCGGACCAGGCTTCATCCCC 	2
------------------------------------------------------------------------------------------TCGGACCAGGCTTCATCCC 	2

HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
3	Arabidopsis thaliana	GSM415786-5994	TCGGACCAGGCTTCATCCCCC	GGAATGTTGTTTGGATCGAGG	down	4	0

Secondary structure

TGATAATCATGAAGAGGCTATTTCTGTTGTGGGGAATGTTGTTTGGATCGAGGATATCATAAACGCATACACATGTTTATATGTTATGATGCATTATATGACTGATGTAATGTACATATATATACATACATGCCACATGGTATCGTCGGACCAGGCTTCATCCCCCTCAACATGTTAATTGCCTTCAATCACTCT
---------TGAAGAGGCTATTTCTGTTGT 	1
--------------------------------GGAATGTTGTTTGGATCGAGG 	12
--------------------------------GGAATGTTGTTTGGATCGA 	1
-------------------------------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATCCCCC 	145
-------------------------------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATCCCC 	2
-------------------------------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATCCC 	5
--------------------------------------------------------------------------------------------------------------------------------------------------CGGACCAGGCTTCATCCCCC 	2

Overlaps with: MNEST040031 MNEST046944
Overlaps with miRBase pre-miRNAs: ath-MIR165b
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
4	Arabidopsis thaliana	GSM415786-5994	TCGGACCAGGCTTCATCCCCC	GGAATGTTGTCTGGATCGAGG	down	4	0

Secondary structure

TTTCAGTTGAGGGGAATGTTGTCTGGATCGAGGATATTATAGATATATACATGTGTATGTTAATGATTCAAGTGATCATAGAGAGTATCCTCGGACCAGGCTTCATCCCCCCCAACATGT
------------GGAATGTTGTCTGGATCGAGGATA 	1
------------GGAATGTTGTCTGGATCGAGGA 	15
------------GGAATGTTGTCTGGATCGAGG 	18
-------------GAATGTTGTCTGGATCGAGGA 	37
--------------AATGTTGTCTGGATCGAGGATATT 	1
--------------AATGTTGTCTGGATCGAGGAT 	9
---------------ATGTTGTCTGGATCGAGGATA 	2
---------------ATGTTGTCTGGATCGAGGAT 	1
---------------------------------------------------------------------------------------TCCTCGGACCAGGCTTCATCC 	52
-----------------------------------------------------------------------------------------CTCGGACCAGGCTTCATCCCCC 	2
-----------------------------------------------------------------------------------------CTCGGACCAGGCTTCATCCCC 	2
-----------------------------------------------------------------------------------------CTCGGACCAGGCTTCATCCC 	1
------------------------------------------------------------------------------------------TCGGACCAGGCTTCATCCCCC 	145
------------------------------------------------------------------------------------------TCGGACCAGGCTTCATCCCC 	2
------------------------------------------------------------------------------------------TCGGACCAGGCTTCATCCC 	5
-------------------------------------------------------------------------------------------CGGACCAGGCTTCATCCCCC 	2

HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
5	Arabidopsis thaliana	GSM424847-4989	TCGGACCAGGCTTCATCCCCC	GGAATGTTGTTTGGATCGAGG	down	4	0

Secondary structure

TGATAATCATGAAGAGGCTATTTCTGTTGTGGGGAATGTTGTTTGGATCGAGGATATCATAAACGCATACACATGTTTATATGTTATGATGCATTATATGACTGATGTAATGTACATATATATACATACATGCCACATGGTATCGTCGGACCAGGCTTCATCCCCCTCAACATGTTAATTGCCTTCAATCACTCT
--------------------------------GGAATGTTGTTTGGATCGAGG 	3
-------------------------------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATCCCCCTC 	7
-------------------------------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATCCCCCT 	60
-------------------------------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATCCCCC 	14977
-------------------------------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATCCCC 	146
--------------------------------------------------------------------------------------------------------------------------------------------------CGGACCAGGCTTCATCCCCC 	2
---------------------------------------------------------------------------------------------------------------------------------------------------GGACCAGGCTTCATCCCCC 	80

Overlaps with: MNEST040031 MNEST046944
Overlaps with miRBase pre-miRNAs: ath-MIR165b
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
6	Arabidopsis thaliana	GSM424847-4989	TCGGACCAGGCTTCATCCCCC	GGAATGTTGTCTGGATCGAGG	down	4	0

Secondary structure

TTTCAGTTGAGGGGAATGTTGTCTGGATCGAGGATATTATAGATATATACATGTGTATGTTAATGATTCAAGTGATCATAGAGAGTATCCTCGGACCAGGCTTCATCCCCCCCAACATGT
------------GGAATGTTGTCTGGATCGAGGA 	32
------------GGAATGTTGTCTGGATCGAGG 	24
-------------GAATGTTGTCTGGATCGAGGA 	10
--------------AATGTTGTCTGGATCGAGGAT 	1
---------------ATGTTGTCTGGATCGAGGATA 	2
------------------------------------------------------------------------------------GTATCCTCGGACCAGGCTTCATCCCC 	1
--------------------------------------------------------------------------------------ATCCTCGGACCAGGCTTCATCCCC 	1
--------------------------------------------------------------------------------------ATCCTCGGACCAGGCTTCATCCC 	1
---------------------------------------------------------------------------------------TCCTCGGACCAGGCTTCATCCCCC 	6
---------------------------------------------------------------------------------------TCCTCGGACCAGGCTTCATCCCC 	13
---------------------------------------------------------------------------------------TCCTCGGACCAGGCTTCATCCC 	1
---------------------------------------------------------------------------------------TCCTCGGACCAGGCTTCATC 	2
---------------------------------------------------------------------------------------TCCTCGGACCAGGCTTCAT 	1
----------------------------------------------------------------------------------------CCTCGGACCAGGCTTCATCCCC 	3
----------------------------------------------------------------------------------------CCTCGGACCAGGCTTCATCCC 	6
-----------------------------------------------------------------------------------------CTCGGACCAGGCTTCATCCCCCC 	1
-----------------------------------------------------------------------------------------CTCGGACCAGGCTTCATCCCCC 	162
-----------------------------------------------------------------------------------------CTCGGACCAGGCTTCATCCCC 	44
-----------------------------------------------------------------------------------------CTCGGACCAGGCTTCATCCC 	6
------------------------------------------------------------------------------------------TCGGACCAGGCTTCATCCCCCC 	39
------------------------------------------------------------------------------------------TCGGACCAGGCTTCATCCCCC 	14977
------------------------------------------------------------------------------------------TCGGACCAGGCTTCATCCCC 	146
-------------------------------------------------------------------------------------------CGGACCAGGCTTCATCCCCC 	2
--------------------------------------------------------------------------------------------GGACCAGGCTTCATCCCCC 	80

HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
7	Arabidopsis thaliana	GSM415785	TCGGACCAGGCTTCATCCCCC	GGAATGTTGTTTGGATCGAGG	down	4	0

Secondary structure

TGATAATCATGAAGAGGCTATTTCTGTTGTGGGGAATGTTGTTTGGATCGAGGATATCATAAACGCATACACATGTTTATATGTTATGATGCATTATATGACTGATGTAATGTACATATATATACATACATGCCACATGGTATCGTCGGACCAGGCTTCATCCCCCTCAACATGTTAATTGCCTTCAATCACTCT
-------------------------------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATCCCCCT 	55
-------------------------------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATCCCCC 	1014
-------------------------------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATCCCC 	5
-------------------------------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATCCC 	5
--------------------------------------------------------------------------------------------------------------------------------------------------CGGACCAGGCTTCATCCCCC 	7
---------------------------------------------------------------------------------------------------------------------------------------------------GGACCAGGCTTCATCCCCC 	3

Overlaps with: MNEST040031 MNEST046944
Overlaps with miRBase pre-miRNAs: ath-MIR165b
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
8	Arabidopsis thaliana	GSM415785	TCGGACCAGGCTTCATCCCCC	GGAATGTTGTCTGGATCGAGG	down	4	0

Secondary structure

TTTCAGTTGAGGGGAATGTTGTCTGGATCGAGGATATTATAGATATATACATGTGTATGTTAATGATTCAAGTGATCATAGAGAGTATCCTCGGACCAGGCTTCATCCCCCCCAACATGT
---------------------------------------------------------------------------------------TCCTCGGACCAGGCTTCATCCCC 	1
---------------------------------------------------------------------------------------TCCTCGGACCAGGCTTCATCC 	10
-----------------------------------------------------------------------------------------CTCGGACCAGGCTTCATCCCCC 	3
-----------------------------------------------------------------------------------------CTCGGACCAGGCTTCATCC 	2
------------------------------------------------------------------------------------------TCGGACCAGGCTTCATCCCCCC 	4
------------------------------------------------------------------------------------------TCGGACCAGGCTTCATCCCCC 	1014
------------------------------------------------------------------------------------------TCGGACCAGGCTTCATCCCC 	5
------------------------------------------------------------------------------------------TCGGACCAGGCTTCATCCC 	5
-------------------------------------------------------------------------------------------CGGACCAGGCTTCATCCCCC 	7
--------------------------------------------------------------------------------------------GGACCAGGCTTCATCCCCC 	3

HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
9	Arabidopsis thaliana	GSM366870	TCGGACCAGGCTTCATCCCCC	GGAATGTTGTTTGGATCGAGG	down	4	0

Secondary structure

TGATAATCATGAAGAGGCTATTTCTGTTGTGGGGAATGTTGTTTGGATCGAGGATATCATAAACGCATACACATGTTTATATGTTATGATGCATTATATGACTGATGTAATGTACATATATATACATACATGCCACATGGTATCGTCGGACCAGGCTTCATCCCCCTCAACATGTTAATTGCCTTCAATCACTCT
--------------------------------GGAATGTTGTTTGGATCGAGG 	2
--------------------------------GGAATGTTGTTTGGATCGAG 	1
-------------------------------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATCCCCC 	45
-------------------------------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATCCCCCT 	1

Overlaps with: MNEST040031 MNEST046944
Overlaps with miRBase pre-miRNAs: ath-MIR165b
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
10	Arabidopsis thaliana	GSM366870	TCGGACCAGGCTTCATCCCCC	GGAATGTTGTCTGGATCGAGG	down	4	0

Secondary structure

TTTCAGTTGAGGGGAATGTTGTCTGGATCGAGGATATTATAGATATATACATGTGTATGTTAATGATTCAAGTGATCATAGAGAGTATCCTCGGACCAGGCTTCATCCCCCCCAACATGT
-------------GAATGTTGTCTGGATCGAGGA 	5
--------------AATGTTGTCTGGATCGAGGAT 	1
---------------------------------------------------------------------------------------TCCTCGGACCAGGCTTCATCC 	3
------------------------------------------------------------------------------------------TCGGACCAGGCTTCATCCCCC 	45

HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
11	Arabidopsis thaliana	GSM366869	TCGGACCAGGCTTCATCCCCC	GGAATGTTGTTTGGATCGAGG	down	4	0

Secondary structure

TGATAATCATGAAGAGGCTATTTCTGTTGTGGGGAATGTTGTTTGGATCGAGGATATCATAAACGCATACACATGTTTATATGTTATGATGCATTATATGACTGATGTAATGTACATATATATACATACATGCCACATGGTATCGTCGGACCAGGCTTCATCCCCCTCAACATGTTAATTGCCTTCAATCACTCT
--------------------------------GGAATGTTGTTTGGATCGAGG 	2
-------------------------------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATCCCCC 	54
-------------------------------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATCCC 	1

Overlaps with: MNEST040031 MNEST046944
Overlaps with miRBase pre-miRNAs: ath-MIR165b
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
12	Arabidopsis thaliana	GSM366869	TCGGACCAGGCTTCATCCCCC	GGAATGTTGTCTGGATCGAGG	down	4	0

Secondary structure

TTTCAGTTGAGGGGAATGTTGTCTGGATCGAGGATATTATAGATATATACATGTGTATGTTAATGATTCAAGTGATCATAGAGAGTATCCTCGGACCAGGCTTCATCCCCCCCAACATGT
-------------GAATGTTGTCTGGATCGAGGA 	13
-------------GAATGTTGTCTGGATCGAGG 	1
--------------AATGTTGTCTGGATCGAGGA 	1
--------------AATGTTGTCTGGATCGAGGAT 	1
------------------------------------------------------------------------------------------TCGGACCAGGCTTCATCCCCC 	54
------------------------------------------------------------------------------------------TCGGACCAGGCTTCATCCCCCC 	1
------------------------------------------------------------------------------------------TCGGACCAGGCTTCATCCC 	1

HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
13	Arabidopsis thaliana	GSM304284	TCGGACCAGGCTTCATCCCCC	GGAATGTTGTTTGGATCGAGG	down	4	0

Secondary structure

TGATAATCATGAAGAGGCTATTTCTGTTGTGGGGAATGTTGTTTGGATCGAGGATATCATAAACGCATACACATGTTTATATGTTATGATGCATTATATGACTGATGTAATGTACATATATATACATACATGCCACATGGTATCGTCGGACCAGGCTTCATCCCCCTCAACATGTTAATTGCCTTCAATCACTCT
--------------------------------GGAATGTTGTTTGGATCGAGGA 	1
--------------------------------GGAATGTTGTTTGGATCGAGG 	4
--------------------------------GGAATGTTGTTTGGATCGAG 	1
-------------------------------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATCCCCC 	22
-------------------------------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATCCCC 	4
-------------------------------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATCCC 	5

Overlaps with: MNEST040031 MNEST046944
Overlaps with miRBase pre-miRNAs: ath-MIR165b
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
14	Arabidopsis thaliana	GSM304284	TCGGACCAGGCTTCATCCCCC	GGAATGTTGTCTGGATCGAGG	down	4	0

Secondary structure

TTTCAGTTGAGGGGAATGTTGTCTGGATCGAGGATATTATAGATATATACATGTGTATGTTAATGATTCAAGTGATCATAGAGAGTATCCTCGGACCAGGCTTCATCCCCCCCAACATGT
------------GGAATGTTGTCTGGATCGAGG 	5
------------GGAATGTTGTCTGGATCGAG 	2
-----------------------------------------------------------------------------------------CTCGGACCAGGCTTCATCCCC 	1
-----------------------------------------------------------------------------------------CTCGGACCAGGCTTCATCCC 	1
-----------------------------------------------------------------------------------------CTCGGACCAGGCTTCATCC 	1
------------------------------------------------------------------------------------------TCGGACCAGGCTTCATCCCCCC 	1
------------------------------------------------------------------------------------------TCGGACCAGGCTTCATCCCCC 	22
------------------------------------------------------------------------------------------TCGGACCAGGCTTCATCCCC 	4
------------------------------------------------------------------------------------------TCGGACCAGGCTTCATCCC 	5

HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
15	Arabidopsis thaliana	GSM366866	TCGGACCAGGCTTCATCCCCC	GGAATGTTGTTTGGATCGAGG	down	4	0

Secondary structure

TGATAATCATGAAGAGGCTATTTCTGTTGTGGGGAATGTTGTTTGGATCGAGGATATCATAAACGCATACACATGTTTATATGTTATGATGCATTATATGACTGATGTAATGTACATATATATACATACATGCCACATGGTATCGTCGGACCAGGCTTCATCCCCCTCAACATGTTAATTGCCTTCAATCACTCT
-------------------------------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATCCCCC 	54
---------------------------------------------------------------------------------------------------------------------------------------------------GGACCAGGCTTCATCCCCC 	1

Overlaps with: MNEST040031 MNEST046944
Overlaps with miRBase pre-miRNAs: ath-MIR165b
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
16	Arabidopsis thaliana	GSM366866	TCGGACCAGGCTTCATCCCCC	GGAATGTTGTCTGGATCGAGG	down	4	0

Secondary structure

TTTCAGTTGAGGGGAATGTTGTCTGGATCGAGGATATTATAGATATATACATGTGTATGTTAATGATTCAAGTGATCATAGAGAGTATCCTCGGACCAGGCTTCATCCCCCCCAACATGT
------------GGAATGTTGTCTGGATCGAGGA 	1
-------------GAATGTTGTCTGGATCGAGGA 	3
------------------------------------------------------------------------------------------TCGGACCAGGCTTCATCCCCC 	54
--------------------------------------------------------------------------------------------GGACCAGGCTTCATCCCCC 	1

HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
17	Arabidopsis thaliana	GSM424848-4990	TCGGACCAGGCTTCATCCCCC	GGAATGTTGTTTGGATCGAGG	down	4	0

Secondary structure

TGATAATCATGAAGAGGCTATTTCTGTTGTGGGGAATGTTGTTTGGATCGAGGATATCATAAACGCATACACATGTTTATATGTTATGATGCATTATATGACTGATGTAATGTACATATATATACATACATGCCACATGGTATCGTCGGACCAGGCTTCATCCCCCTCAACATGTTAATTGCCTTCAATCACTCT
-------------------------------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATCCCCCTC 	1
-------------------------------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATCCCCCT 	26
-------------------------------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATCCCCC 	15750
-------------------------------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATCCCC 	176
--------------------------------------------------------------------------------------------------------------------------------------------------CGGACCAGGCTTCATCCCCC 	4
---------------------------------------------------------------------------------------------------------------------------------------------------GGACCAGGCTTCATCCCCC 	88

Overlaps with: MNEST040031 MNEST046944
Overlaps with miRBase pre-miRNAs: ath-MIR165b
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
18	Arabidopsis thaliana	GSM424848-4990	TCGGACCAGGCTTCATCCCCC	GGAATGTTGTCTGGATCGAGG	down	4	0

Secondary structure

TTTCAGTTGAGGGGAATGTTGTCTGGATCGAGGATATTATAGATATATACATGTGTATGTTAATGATTCAAGTGATCATAGAGAGTATCCTCGGACCAGGCTTCATCCCCCCCAACATGT
------------GGAATGTTGTCTGGATCGAGGAT 	1
------------GGAATGTTGTCTGGATCGAGGA 	28
------------GGAATGTTGTCTGGATCGAGG 	6
-------------GAATGTTGTCTGGATCGAGGA 	1
---------------ATGTTGTCTGGATCGAGGATA 	1
--------------------------------------------------------------------------------------ATCCTCGGACCAGGCTTCATCCCC 	1
--------------------------------------------------------------------------------------ATCCTCGGACCAGGCTTCATCCC 	1
--------------------------------------------------------------------------------------ATCCTCGGACCAGGCTTCATCC 	1
---------------------------------------------------------------------------------------TCCTCGGACCAGGCTTCATCCCCC 	3
---------------------------------------------------------------------------------------TCCTCGGACCAGGCTTCATCCCC 	17
---------------------------------------------------------------------------------------TCCTCGGACCAGGCTTCATCCC 	1
---------------------------------------------------------------------------------------TCCTCGGACCAGGCTTCAT 	1
----------------------------------------------------------------------------------------CCTCGGACCAGGCTTCATCCCCC 	2
----------------------------------------------------------------------------------------CCTCGGACCAGGCTTCATCCC 	1
-----------------------------------------------------------------------------------------CTCGGACCAGGCTTCATCCCCCC 	2
-----------------------------------------------------------------------------------------CTCGGACCAGGCTTCATCCCCC 	125
-----------------------------------------------------------------------------------------CTCGGACCAGGCTTCATCCCC 	21
-----------------------------------------------------------------------------------------CTCGGACCAGGCTTCATCCC 	2
------------------------------------------------------------------------------------------TCGGACCAGGCTTCATCCCCCC 	25
------------------------------------------------------------------------------------------TCGGACCAGGCTTCATCCCCC 	15750
------------------------------------------------------------------------------------------TCGGACCAGGCTTCATCCCC 	176
-------------------------------------------------------------------------------------------CGGACCAGGCTTCATCCCCC 	4
--------------------------------------------------------------------------------------------GGACCAGGCTTCATCCCCC 	88

HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
19	Arabidopsis thaliana	GSM304283	TCGGACCAGGCTTCATCCCCC	GGAATGTTGTTTGGATCGAGG	down	4	0

Secondary structure

TGATAATCATGAAGAGGCTATTTCTGTTGTGGGGAATGTTGTTTGGATCGAGGATATCATAAACGCATACACATGTTTATATGTTATGATGCATTATATGACTGATGTAATGTACATATATATACATACATGCCACATGGTATCGTCGGACCAGGCTTCATCCCCCTCAACATGTTAATTGCCTTCAATCACTCT
-------------------------------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATCCCCC 	15
-------------------------------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATCCCC 	1

Overlaps with: MNEST040031 MNEST046944
Overlaps with miRBase pre-miRNAs: ath-MIR165b
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
20	Arabidopsis thaliana	GSM304285	TCGGACCAGGCTTCATCCCCC	GGAATGTTGTTTGGATCGAGG	down	4	0

Secondary structure

TGATAATCATGAAGAGGCTATTTCTGTTGTGGGGAATGTTGTTTGGATCGAGGATATCATAAACGCATACACATGTTTATATGTTATGATGCATTATATGACTGATGTAATGTACATATATATACATACATGCCACATGGTATCGTCGGACCAGGCTTCATCCCCCTCAACATGTTAATTGCCTTCAATCACTCT
--------------------------------GGAATGTTGTTTGGATCGAGG 	1
-------------------------------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATCCCCC 	28
-------------------------------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATCCCC 	3

Overlaps with: MNEST040031 MNEST046944
Overlaps with miRBase pre-miRNAs: ath-MIR165b
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
21	Arabidopsis thaliana	GSM304285	TCGGACCAGGCTTCATCCCCC	GGAATGTTGTCTGGATCGAGG	down	4	0

Secondary structure

TTTCAGTTGAGGGGAATGTTGTCTGGATCGAGGATATTATAGATATATACATGTGTATGTTAATGATTCAAGTGATCATAGAGAGTATCCTCGGACCAGGCTTCATCCCCCCCAACATGT
---------------------------------------------------------------------------------------TCCTCGGACCAGGCTTCATCC 	1
------------------------------------------------------------------------------------------TCGGACCAGGCTTCATCCCCC 	28
------------------------------------------------------------------------------------------TCGGACCAGGCTTCATCCCC 	3

HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
22	Arabidopsis thaliana	GSM518432-13544	TCGGACCAGGCTTCATCCCCC	GGAATGTTGTTTGGATCGAGG	down	4	0

Secondary structure

TGATAATCATGAAGAGGCTATTTCTGTTGTGGGGAATGTTGTTTGGATCGAGGATATCATAAACGCATACACATGTTTATATGTTATGATGCATTATATGACTGATGTAATGTACATATATATACATACATGCCACATGGTATCGTCGGACCAGGCTTCATCCCCCTCAACATGTTAATTGCCTTCAATCACTCT
--------------------------------GGAATGTTGTTTGGATCGA 	2
--------------------------------GGAATGTTGTTTGGATCGAGG 	24
-------------------------------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATCCCCC 	379
-------------------------------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATCCCC 	2
-------------------------------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATCCCCCT 	2
---------------------------------------------------------------------------------------------------------------------------------------------------GGACCAGGCTTCATCCCCC 	2

Overlaps with: MNEST040031 MNEST046944
Overlaps with miRBase pre-miRNAs: ath-MIR165b
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
23	Arabidopsis thaliana	GSM518432-13544	TCGGACCAGGCTTCATCCCCC	GGAATGTTGTCTGGATCGAGG	down	4	0

Secondary structure

TTTCAGTTGAGGGGAATGTTGTCTGGATCGAGGATATTATAGATATATACATGTGTATGTTAATGATTCAAGTGATCATAGAGAGTATCCTCGGACCAGGCTTCATCCCCCCCAACATGT
------------GGAATGTTGTCTGGATCGAGGAT 	1
------------GGAATGTTGTCTGGATCGAGG 	17
-------------GAATGTTGTCTGGATCGAGGA 	1
---------------ATGTTGTCTGGATCGAGGATA 	1
---------------------------------------------------------------------------------------TCCTCGGACCAGGCTTCATCC 	26
-----------------------------------------------------------------------------------------CTCGGACCAGGCTTCATCCC 	1
-----------------------------------------------------------------------------------------CTCGGACCAGGCTTCATCCCCC 	2
------------------------------------------------------------------------------------------TCGGACCAGGCTTCATCCCCC 	379
------------------------------------------------------------------------------------------TCGGACCAGGCTTCATCCCC 	2
--------------------------------------------------------------------------------------------GGACCAGGCTTCATCCCCC 	2

HuntMi prediction: true miRNA