miRNEST 2.0, an integrative microRNA resource :: deep sequencing predictions

Please select library, species and/or miRNA sequence.

selected mature miRNA sequence: TCGGACCAGGCTTCATTCC

selected species: Oryza sativa

100 records found

Showing records 1 - 50

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#	species	library	miRNA	miRNA*	arm	mismatches	bulges
1	Oryza sativa	GSM693280	TCGGACCAGGCTTCATTCCCC	GGAATGTTGTCTGGTTCAAGG	down	4	0

Secondary structure

GGGAAAGGAAAATAGATAGTATGAAGCTATTTGCTTCTGAGTGGAATGTTGTCTGGTTCAAGGTCTCATGCACCTTGCGGTTTTGAGGATGATTTGTGCAAGGTTTTTCATTCCTCTCATCCGTGGGATCTCGGACCAGGCTTCATTCCCCTCAGAGATAGCTTCAAAACATTAGATCTATAGTTCTCGC
----------------------------------TTCTGAGTGGAATGTTGTCTG 	1
-----------------------------------------TGGAATGTTGTCTGGTTCAAGG 	1
------------------------------------------GGAATGTTGTCTGGTTCAAGG 	1
---------------------------------------------------------------------------------------------------------------------------TGGGATCTCGGACCAGGCTTCATTCC 	1
--------------------------------------------------------------------------------------------------------------------------------TCTCGGACCAGGCTTCATTCC 	95
--------------------------------------------------------------------------------------------------------------------------------TCTCGGACCAGGCTTCATTC 	4
--------------------------------------------------------------------------------------------------------------------------------TCTCGGACCAGGCTTCATTCCCC 	1
---------------------------------------------------------------------------------------------------------------------------------CTCGGACCAGGCTTCATTCCCC 	18
---------------------------------------------------------------------------------------------------------------------------------CTCGGACCAGGCTTCATTCCC 	1
---------------------------------------------------------------------------------------------------------------------------------CTCGGACCAGGCTTCATTC 	1
----------------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCC 	12704
----------------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCC 	369
----------------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCC 	648
----------------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCCT 	13
-----------------------------------------------------------------------------------------------------------------------------------CGGACCAGGCTTCATTCCCC 	48
-----------------------------------------------------------------------------------------------------------------------------------CGGACCAGGCTTCATTCCC 	2
------------------------------------------------------------------------------------------------------------------------------------GGACCAGGCTTCATTCCCC 	105

Overlaps with: MNEST041937 MNEST048844
Overlaps with miRBase pre-miRNAs: osa-MIR166a
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
2	Oryza sativa	GSM693280	TCGGACCAGGCTTCATTCCCC	GGAATGTCGTCTGGCCTGAGA	down	4	0

Secondary structure

CTCCATTAATTTCAGTTCTTCCCCTCGATCATCTTGTTGAGAGGAATGTCGTCTGGCCTGAGATCGTACCACAGTGGTGGGTACACGTGGACGGTCTCGGACCAGGCTTCATTCCCCTCAACAACTCGTCGGAGTAGAGGAAGAAGACGGACAGTG
-----------------------------------GTTGAGAGGAATGTCGTCTGG 	1
--------------------------------------GAGAGGAATGTCGTCTGGCCTGAG 	1
------------------------------------------GGAATGTCGTCTGGCCTGAGA 	2
----------------------------------------------------------------------------------------------TCTCGGACCAGGCTTCATTCC 	95
----------------------------------------------------------------------------------------------TCTCGGACCAGGCTTCATTC 	4
----------------------------------------------------------------------------------------------TCTCGGACCAGGCTTCATTCCCC 	1
-----------------------------------------------------------------------------------------------CTCGGACCAGGCTTCATTCCCC 	18
-----------------------------------------------------------------------------------------------CTCGGACCAGGCTTCATTCCC 	1
-----------------------------------------------------------------------------------------------CTCGGACCAGGCTTCATTC 	1
------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCC 	12704
------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCC 	369
------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCC 	648
------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCCT 	13
-------------------------------------------------------------------------------------------------CGGACCAGGCTTCATTCCCC 	48
-------------------------------------------------------------------------------------------------CGGACCAGGCTTCATTCCC 	2
--------------------------------------------------------------------------------------------------GGACCAGGCTTCATTCCCC 	105

Overlaps with: MNEST041942 MNEST048849
Overlaps with miRBase pre-miRNAs: osa-MIR166f
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
3	Oryza sativa	GSM693280	TCGGACCAGGCTTCATTCCTC	GGAATGGAGGCTGATCCAAGA	down	5	0

Secondary structure

GAGGAAGGGAAGCATGGTGTCTGGAATGGAGGCTGATCCAAGATCATTGCTTGGTGCAAAATACTAGGGCATTGTTGTAAGTGCCATTAGTTCTTTTTTGTTTCCGAGTTTGTTATCGAGGATCTCGGACCAGGCTTCATTCCTCACACCGTGCTTCCCGTTGC
------------------------AATGGAGGCTGATCCAAGATC 	1
--------------------------------------------------------------------------------------------------------------------------TCTCGGACCAGGCTTCATTCC 	95
--------------------------------------------------------------------------------------------------------------------------TCTCGGACCAGGCTTCATTC 	4
---------------------------------------------------------------------------------------------------------------------------CTCGGACCAGGCTTCATTCCTC 	3
---------------------------------------------------------------------------------------------------------------------------CTCGGACCAGGCTTCATTC 	1
---------------------------------------------------------------------------------------------------------------------------CTCGGACCAGGCTTCATTCCT 	1
----------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCTC 	1881
----------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCC 	648
----------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCT 	28
----------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCTCA 	1
-----------------------------------------------------------------------------------------------------------------------------CGGACCAGGCTTCATTCCTC 	6
------------------------------------------------------------------------------------------------------------------------------GGACCAGGCTTCATTCCTC 	10

Overlaps with: MNEST041943 MNEST048850
Overlaps with miRBase pre-miRNAs: osa-MIR166g
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
4	Oryza sativa	GSM693280	TCGGACCAGGCTTCATTCC	TTTGTTGTCTGGTTCAAGG	down	5	0

Secondary structure

TCGGTTAAGGGGTTTGTTGTCTGGTTCAAGGCCTCCTGCTGTCCTACATCACATTTTTTTTTCTTTGTTCTGAATTTCTGATGGATGTGTGTGTGCATGATGCATGGCTGGTGGTGACCTCGGACCAGGCTTCATTCCCTTTAACCA
----------------------------------------------------------------------------------------------------------------------CTCGGACCAGGCTTCATTCCC 	1
----------------------------------------------------------------------------------------------------------------------CTCGGACCAGGCTTCATTC 	1
-----------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCC 	369
-----------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCC 	648
-----------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCT 	10
-----------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCTT 	4
------------------------------------------------------------------------------------------------------------------------CGGACCAGGCTTCATTCCC 	2

HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
5	Oryza sativa	GSM693280	TCGGACCAGGCTTCATTCCCC	GGAATGTTGTCTGGCTCGGGG	down	3	0

Secondary structure

AGGGAGCCTTTTCATTTTGAGGGGAATGTTGTCTGGCTCGGGGCTACTTTTAATTTCTCTCTCTTTTGATATCTTCTTTTCTCGATCTCCTAGCTTGATCTTTTGATCTCTCAAATCGATCTTAAGAAAAAGATCAGTCAAAGAGATGAGAGTAGATGTCTGTAGATCTCGGACCAGGCTTCATTCCCCCCAAACAGAAGGGCTCCCA
-----------------TGAGGGGAATGTTGTCTGGCT 	5
-----------------TGAGGGGAATGTTGTCTGGCTC 	4
----------------------GGAATGTTGTCTGGCTCGGGG 	1
----------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTCGGACCAGGCTTCATTCC 	95
----------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTCGGACCAGGCTTCATTC 	4
----------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTCGGACCAGGCTTCATTCCCC 	1
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCGGACCAGGCTTCATTCCCC 	18
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCGGACCAGGCTTCATTCCC 	1
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCGGACCAGGCTTCATTC 	1
------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCC 	12704
------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCC 	369
------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCC 	648
------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCCC 	1
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGGACCAGGCTTCATTCCCC 	48
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGGACCAGGCTTCATTCCC 	2
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGACCAGGCTTCATTCCCC 	105

HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
6	Oryza sativa	GSM693280	TCGGACCAGGCTTCATTCCCC	GGAATGTTGTCTGGCTCGAGG	down	3	0

Secondary structure

AGGAAGCTTTTTCACTTTGAGGGGAATGTTGTCTGGCTCGAGGTGCATGGAGAAACCTCTGATCGATCAGGTTTGATCTGTAGAGACTGATCTCGGACCAGGCTTCATTCCCCTCAAGTAAAGCTCCCATAT
-----------------TGAGGGGAATGTTGTCTGGCT 	5
-----------------TGAGGGGAATGTTGTCTGGCTC 	4
----------------------GGAATGTTGTCTGGCTCGAGG 	137
----------------------GGAATGTTGTCTGGCTCGAG 	32
----------------------GGAATGTTGTCTGGCTCGA 	2
----------------------GGAATGTTGTCTGGCTCGAGGT 	2
----------------------GGAATGTTGTCTGGCTCGAGGTGC 	2
------------------------AATGTTGTCTGGCTCGAGGTG 	2
-------------------------ATGTTGTCTGGCTCGAGGTGC 	2
-------------------------------------------------GAGAAACCTCTGATCGATCAG 	1
------------------------------------------------------------------------------------------TCTCGGACCAGGCTTCATTCC 	95
------------------------------------------------------------------------------------------TCTCGGACCAGGCTTCATTC 	4
------------------------------------------------------------------------------------------TCTCGGACCAGGCTTCATTCCCC 	1
-------------------------------------------------------------------------------------------CTCGGACCAGGCTTCATTCCCC 	18
-------------------------------------------------------------------------------------------CTCGGACCAGGCTTCATTCCC 	1
-------------------------------------------------------------------------------------------CTCGGACCAGGCTTCATTC 	1
--------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCC 	12704
--------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCC 	369
--------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCC 	648
--------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCCT 	13
---------------------------------------------------------------------------------------------CGGACCAGGCTTCATTCCCC 	48
---------------------------------------------------------------------------------------------CGGACCAGGCTTCATTCCC 	2
----------------------------------------------------------------------------------------------GGACCAGGCTTCATTCCCC 	105

Overlaps with: MNEST045417
Overlaps with miRBase pre-miRNAs: osa-MIR166d
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
7	Oryza sativa	GSM693280	TCGGACCAGGCTTCATTCCTC	GGAATGTTGGCTGGCTCGAGG	down	2	2

Secondary structure

GGTGGCTTGTGGGGAATGTTGGCTGGCTCGAGGTATCCACATCTTAATTCCTCTCCGGCGATCGAGCCGGCTCGGGCGTGTGGAAGCGTCGGACCAGGCTTCATTCCTCGCAAGCCGA
------------GGAATGTTGGCTGGCTCGAGG 	10
------------GGAATGTTGGCTGGCTCGAG 	2
----------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCTC 	1881
----------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCC 	648
----------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCT 	28
-----------------------------------------------------------------------------------------CGGACCAGGCTTCATTCCTC 	6
------------------------------------------------------------------------------------------GGACCAGGCTTCATTCCTC 	10

Overlaps with: MNEST041944 MNEST048851
Overlaps with miRBase pre-miRNAs: osa-MIR166h
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
8	Oryza sativa	GSM693280	TCGGACCAGGCTTCATTCCCC	GGAATGTTGTCTGGTCCGAGA	down	2	0

Secondary structure

TTCATTTTTATGGCAGTTGAGGGGAATGTTGTCTGGTCCGAGACCTAACACCGGGCGGAATGGCGGATTCAGCTGCAGCTAAGCAAGCTAGGTGGGGGGTTTCGGACCAGGCTTCATTCCCCCCAACTCAACTGTTTAGTT
-----------------TGAGGGGAATGTTGTCTGGTC 	2
----------------------GGAATGTTGTCTGGTCCGAGA 	2
-----------------------------------------------------------------------------------------AGGTGGGGGGTTTCGGACCAGGCT 	1
----------------------------------------------------------------------------------------------GGGGGTTTCGGACCAGGCTTCATT 	1
---------------------------------------------------------------------------------------------------TTTCGGACCAGGCTTCATTCC 	9
----------------------------------------------------------------------------------------------------TTCGGACCAGGCTTCATTCCC 	401
----------------------------------------------------------------------------------------------------TTCGGACCAGGCTTCATTCC 	3
----------------------------------------------------------------------------------------------------TTCGGACCAGGCTTCATTC 	2
-----------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCC 	12704
-----------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCC 	369
-----------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCC 	648
-----------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCCC 	1
------------------------------------------------------------------------------------------------------CGGACCAGGCTTCATTCCCC 	48
------------------------------------------------------------------------------------------------------CGGACCAGGCTTCATTCCC 	2
-------------------------------------------------------------------------------------------------------GGACCAGGCTTCATTCCCC 	105

Overlaps with: MNEST041939 MNEST048846
Overlaps with miRBase pre-miRNAs: osa-MIR166c hvu-MIR166b
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
9	Oryza sativa	GSM571078-22531	TCGGACCAGGCTTCATTCCCC	GGAATGTTGTCTGGTTCAAGG	down	4	0

Secondary structure

GGGAAAGGAAAATAGATAGTATGAAGCTATTTGCTTCTGAGTGGAATGTTGTCTGGTTCAAGGTCTCATGCACCTTGCGGTTTTGAGGATGATTTGTGCAAGGTTTTTCATTCCTCTCATCCGTGGGATCTCGGACCAGGCTTCATTCCCCTCAGAGATAGCTTCAAAACATTAGATCTATAGTTCTCGC
-----------------------------------------TGGAATGTTGTCTGGTTCAAGGTC 	2
-----------------------------------------TGGAATGTTGTCTGGTTCAA 	1
------------------------------------------GGAATGTTGTCTGGTTCAAGG 	9
------------------------------------------GGAATGTTGTCTGGTTCAAG 	1
---------------------------------------------------------------------------------------------------------------------CATCCGTGGGATCTCGGACCAGGC 	1
--------------------------------------------------------------------------------------------------------------------------GTGGGATCTCGGACCAGGCTTCAT 	1
-------------------------------------------------------------------------------------------------------------------------------ATCTCGGACCAGGCTTCATTCCCC 	5
--------------------------------------------------------------------------------------------------------------------------------TCTCGGACCAGGCTTCATTCC 	781
--------------------------------------------------------------------------------------------------------------------------------TCTCGGACCAGGCTTCATTC 	14
--------------------------------------------------------------------------------------------------------------------------------TCTCGGACCAGGCTTCATT 	4
---------------------------------------------------------------------------------------------------------------------------------CTCGGACCAGGCTTCATTCCCC 	39
---------------------------------------------------------------------------------------------------------------------------------CTCGGACCAGGCTTCATTCC 	43
---------------------------------------------------------------------------------------------------------------------------------CTCGGACCAGGCTTCATTC 	1
---------------------------------------------------------------------------------------------------------------------------------CTCGGACCAGGCTTCATTCCC 	1
----------------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCCT 	21
----------------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCC 	7938
----------------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCC 	143
----------------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCC 	228
-----------------------------------------------------------------------------------------------------------------------------------CGGACCAGGCTTCATTCCCC 	206
-----------------------------------------------------------------------------------------------------------------------------------CGGACCAGGCTTCATTCCC 	5
------------------------------------------------------------------------------------------------------------------------------------GGACCAGGCTTCATTCCCC 	97

Overlaps with: MNEST041937 MNEST048844
Overlaps with miRBase pre-miRNAs: osa-MIR166a
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
10	Oryza sativa	GSM571078-22531	TCGGACCAGGCTTCATTCCCC	GGAATGTCGTCTGGCCTGAGA	down	4	0

Secondary structure

CTCCATTAATTTCAGTTCTTCCCCTCGATCATCTTGTTGAGAGGAATGTCGTCTGGCCTGAGATCGTACCACAGTGGTGGGTACACGTGGACGGTCTCGGACCAGGCTTCATTCCCCTCAACAACTCGTCGGAGTAGAGGAAGAAGACGGACAGTG
----------------------------------------------------------------------------------------------TCTCGGACCAGGCTTCATTCC 	781
----------------------------------------------------------------------------------------------TCTCGGACCAGGCTTCATTC 	14
----------------------------------------------------------------------------------------------TCTCGGACCAGGCTTCATT 	4
-----------------------------------------------------------------------------------------------CTCGGACCAGGCTTCATTCCCC 	39
-----------------------------------------------------------------------------------------------CTCGGACCAGGCTTCATTCC 	43
-----------------------------------------------------------------------------------------------CTCGGACCAGGCTTCATTC 	1
-----------------------------------------------------------------------------------------------CTCGGACCAGGCTTCATTCCC 	1
------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCCT 	21
------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCC 	7938
------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCC 	143
------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCC 	228
-------------------------------------------------------------------------------------------------CGGACCAGGCTTCATTCCCC 	206
-------------------------------------------------------------------------------------------------CGGACCAGGCTTCATTCCC 	5
--------------------------------------------------------------------------------------------------GGACCAGGCTTCATTCCCC 	97

Overlaps with: MNEST041942 MNEST048849
Overlaps with miRBase pre-miRNAs: osa-MIR166f
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
11	Oryza sativa	GSM571078-22531	TCGGACCAGGCTTCATTCCTC	GGAATGGAGGCTGATCCAAGA	down	5	0

Secondary structure

GAGGAAGGGAAGCATGGTGTCTGGAATGGAGGCTGATCCAAGATCATTGCTTGGTGCAAAATACTAGGGCATTGTTGTAAGTGCCATTAGTTCTTTTTTGTTTCCGAGTTTGTTATCGAGGATCTCGGACCAGGCTTCATTCCTCACACCGTGCTTCCCGTTGC
------------------------AATGGAGGCTGATCCAAGATC 	1
-------------------------------------------------------------------------------------------------------------------------ATCTCGGACCAGGCTTCATTCCTC 	1
--------------------------------------------------------------------------------------------------------------------------TCTCGGACCAGGCTTCATTCC 	781
--------------------------------------------------------------------------------------------------------------------------TCTCGGACCAGGCTTCATTC 	14
--------------------------------------------------------------------------------------------------------------------------TCTCGGACCAGGCTTCATT 	4
--------------------------------------------------------------------------------------------------------------------------TCTCGGACCAGGCTTCATTCCT 	2
---------------------------------------------------------------------------------------------------------------------------CTCGGACCAGGCTTCATTCC 	43
---------------------------------------------------------------------------------------------------------------------------CTCGGACCAGGCTTCATTCCTC 	6
---------------------------------------------------------------------------------------------------------------------------CTCGGACCAGGCTTCATTC 	1
---------------------------------------------------------------------------------------------------------------------------CTCGGACCAGGCTTCATTCCT 	1
----------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCTC 	1742
----------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCT 	20
----------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCC 	228
----------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCTCA 	3
-----------------------------------------------------------------------------------------------------------------------------CGGACCAGGCTTCATTCCTC 	52
------------------------------------------------------------------------------------------------------------------------------GGACCAGGCTTCATTCCTC 	10

Overlaps with: MNEST041943 MNEST048850
Overlaps with miRBase pre-miRNAs: osa-MIR166g
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
12	Oryza sativa	GSM571078-22531	TCGGACCAGGCTTCATTCC	TTTGTTGTCTGGTTCAAGG	down	5	0

Secondary structure

TCGGTTAAGGGGTTTGTTGTCTGGTTCAAGGCCTCCTGCTGTCCTACATCACATTTTTTTTTCTTTGTTCTGAATTTCTGATGGATGTGTGTGTGCATGATGCATGGCTGGTGGTGACCTCGGACCAGGCTTCATTCCCTTTAACCA
----------------------------------------------------------------------------------------------------------------------CTCGGACCAGGCTTCATTCC 	43
----------------------------------------------------------------------------------------------------------------------CTCGGACCAGGCTTCATTC 	1
----------------------------------------------------------------------------------------------------------------------CTCGGACCAGGCTTCATTCCC 	1
-----------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCT 	55
-----------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCC 	143
-----------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCC 	228
-----------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCTT 	3
------------------------------------------------------------------------------------------------------------------------CGGACCAGGCTTCATTCCC 	5
------------------------------------------------------------------------------------------------------------------------CGGACCAGGCTTCATTCCCT 	4
-------------------------------------------------------------------------------------------------------------------------GGACCAGGCTTCATTCCCT 	2

HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
13	Oryza sativa	GSM571078-22531	TCGGACCAGGCTTCATTCCCC	GGAATGTTGTCTGGCTCGGGG	down	3	0

Secondary structure

AGGGAGCCTTTTCATTTTGAGGGGAATGTTGTCTGGCTCGGGGCTACTTTTAATTTCTCTCTCTTTTGATATCTTCTTTTCTCGATCTCCTAGCTTGATCTTTTGATCTCTCAAATCGATCTTAAGAAAAAGATCAGTCAAAGAGATGAGAGTAGATGTCTGTAGATCTCGGACCAGGCTTCATTCCCCCCAAACAGAAGGGCTCCCA
-----------------TGAGGGGAATGTTGTCTGGCT 	1
--------------------GGGGAATGTTGTCTGGCTCGG 	1
----------------------GGAATGTTGTCTGGCTCGGGG 	7
----------------------GGAATGTTGTCTGGCTCGGG 	1
---------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCTCGGACCAGGCTTCATTCCCC 	5
----------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTCGGACCAGGCTTCATTCC 	781
----------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTCGGACCAGGCTTCATTC 	14
----------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTCGGACCAGGCTTCATT 	4
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCGGACCAGGCTTCATTCCCC 	39
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCGGACCAGGCTTCATTCC 	43
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCGGACCAGGCTTCATTC 	1
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCGGACCAGGCTTCATTCCC 	1
------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCC 	7938
------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCC 	143
------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCC 	228
------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCCC 	7
------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCCCC 	1
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGGACCAGGCTTCATTCCCC 	206
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGGACCAGGCTTCATTCCC 	5
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGACCAGGCTTCATTCCCC 	97

HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
14	Oryza sativa	GSM571078-22531	TCGGACCAGGCTTCATTCCCC	GGAATGTTGTCTGGCTCGAGG	down	3	0

Secondary structure

AGGAAGCTTTTTCACTTTGAGGGGAATGTTGTCTGGCTCGAGGTGCATGGAGAAACCTCTGATCGATCAGGTTTGATCTGTAGAGACTGATCTCGGACCAGGCTTCATTCCCCTCAAGTAAAGCTCCCATAT
-----------------TGAGGGGAATGTTGTCTGGCT 	1
----------------------GGAATGTTGTCTGGCTCGAGG 	13
----------------------GGAATGTTGTCTGGCTCGAGGTGCAT 	1
-----------------------GAATGTTGTCTGGCTCGAGG 	3
------------------------AATGTTGTCTGGCTCGAGGTG 	1
-------------------------ATGTTGTCTGGCTCGAGGTGC 	3
-----------------------------------------------------------------------------------------ATCTCGGACCAGGCTTCATTCCCC 	5
------------------------------------------------------------------------------------------TCTCGGACCAGGCTTCATTCC 	781
------------------------------------------------------------------------------------------TCTCGGACCAGGCTTCATTC 	14
------------------------------------------------------------------------------------------TCTCGGACCAGGCTTCATT 	4
-------------------------------------------------------------------------------------------CTCGGACCAGGCTTCATTCCCC 	39
-------------------------------------------------------------------------------------------CTCGGACCAGGCTTCATTCC 	43
-------------------------------------------------------------------------------------------CTCGGACCAGGCTTCATTC 	1
-------------------------------------------------------------------------------------------CTCGGACCAGGCTTCATTCCC 	1
--------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCCT 	21
--------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCC 	7938
--------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCC 	143
--------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCC 	228
---------------------------------------------------------------------------------------------CGGACCAGGCTTCATTCCCC 	206
---------------------------------------------------------------------------------------------CGGACCAGGCTTCATTCCC 	5
----------------------------------------------------------------------------------------------GGACCAGGCTTCATTCCCC 	97

Overlaps with: MNEST045417
Overlaps with miRBase pre-miRNAs: osa-MIR166d
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
15	Oryza sativa	GSM571078-22531	TCGGACCAGGCTTCATTCCTC	GGAATGTTGGCTGGCTCGAGG	down	2	2

Secondary structure

GGTGGCTTGTGGGGAATGTTGGCTGGCTCGAGGTATCCACATCTTAATTCCTCTCCGGCGATCGAGCCGGCTCGGGCGTGTGGAAGCGTCGGACCAGGCTTCATTCCTCGCAAGCCGA
--TGGCTTGTGGGGAATGTTGGCTGG 	1
------------GGAATGTTGGCTGGCTCGAGG 	20
----------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCTC 	1742
----------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCT 	20
----------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCC 	228
-----------------------------------------------------------------------------------------CGGACCAGGCTTCATTCCTC 	52
------------------------------------------------------------------------------------------GGACCAGGCTTCATTCCTC 	10

Overlaps with: MNEST041944 MNEST048851
Overlaps with miRBase pre-miRNAs: osa-MIR166h
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
16	Oryza sativa	GSM571078-22531	TCGGACCAGGCTTCATTCCCC	GGAATGTTGTCTGGTCCGAGA	down	2	0

Secondary structure

TTCATTTTTATGGCAGTTGAGGGGAATGTTGTCTGGTCCGAGACCTAACACCGGGCGGAATGGCGGATTCAGCTGCAGCTAAGCAAGCTAGGTGGGGGGTTTCGGACCAGGCTTCATTCCCCCCAACTCAACTGTTTAGTT
-----------------TGAGGGGAATGTTGTCTGGTC 	2
----------------------GGAATGTTGTCTGGTCCGAGA 	23
-----------------------GAATGTTGTCTGGTCCGAGA 	2
-----------------------GAATGTTGTCTGGTCCGAGAC 	1
---------------------------------------------------------------------------------------------GGGGGGTTTCGGACCAGGCTT 	1
--------------------------------------------------------------------------------------------------GTTTCGGACCAGGCTTCATTC 	4
---------------------------------------------------------------------------------------------------TTTCGGACCAGGCTTCATTCC 	20
---------------------------------------------------------------------------------------------------TTTCGGACCAGGCTTCATTCCC 	1
---------------------------------------------------------------------------------------------------TTTCGGACCAGGCTTCATTC 	1
----------------------------------------------------------------------------------------------------TTCGGACCAGGCTTCATTCCC 	711
----------------------------------------------------------------------------------------------------TTCGGACCAGGCTTCATTCCCC 	7
----------------------------------------------------------------------------------------------------TTCGGACCAGGCTTCATTCC 	6
----------------------------------------------------------------------------------------------------TTCGGACCAGGCTTCATTC 	3
-----------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCC 	7938
-----------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCC 	143
-----------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCC 	228
-----------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCCC 	7
-----------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCCCC 	1
------------------------------------------------------------------------------------------------------CGGACCAGGCTTCATTCCCC 	206
------------------------------------------------------------------------------------------------------CGGACCAGGCTTCATTCCC 	5
-------------------------------------------------------------------------------------------------------GGACCAGGCTTCATTCCCC 	97

Overlaps with: MNEST041939 MNEST048846
Overlaps with miRBase pre-miRNAs: osa-MIR166c hvu-MIR166b
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
17	Oryza sativa	GSM520638-18676	TCGGACCAGGCTTCATTCCCC	GGAATGTTGTCTGGTTCAAGG	down	4	0

Secondary structure

GGGAAAGGAAAATAGATAGTATGAAGCTATTTGCTTCTGAGTGGAATGTTGTCTGGTTCAAGGTCTCATGCACCTTGCGGTTTTGAGGATGATTTGTGCAAGGTTTTTCATTCCTCTCATCCGTGGGATCTCGGACCAGGCTTCATTCCCCTCAGAGATAGCTTCAAAACATTAGATCTATAGTTCTCGC
------------------------------------------GGAATGTTGTCTGGTTCAAGG 	39
------------------------------------------GGAATGTTGTCTGGTTCAA 	3
--------------------------------------------------------------------------------------------------------------------------------TCTCGGACCAGGCTTCATTCCC 	2
--------------------------------------------------------------------------------------------------------------------------------TCTCGGACCAGGCTTCATT 	2
--------------------------------------------------------------------------------------------------------------------------------TCTCGGACCAGGCTTCATTC 	5
--------------------------------------------------------------------------------------------------------------------------------TCTCGGACCAGGCTTCATTCC 	451
---------------------------------------------------------------------------------------------------------------------------------CTCGGACCAGGCTTCATTCC 	2
---------------------------------------------------------------------------------------------------------------------------------CTCGGACCAGGCTTCATTCCCC 	7
---------------------------------------------------------------------------------------------------------------------------------CTCGGACCAGGCTTCATTCCC 	2
----------------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCC 	39
----------------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCCT 	2
----------------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCC 	3817
----------------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCC 	55
-----------------------------------------------------------------------------------------------------------------------------------CGGACCAGGCTTCATTCCCC 	2
-----------------------------------------------------------------------------------------------------------------------------------CGGACCAGGCTTCATTCCC 	1
------------------------------------------------------------------------------------------------------------------------------------GGACCAGGCTTCATTCCCC 	28

Overlaps with: MNEST041937 MNEST048844
Overlaps with miRBase pre-miRNAs: osa-MIR166a
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
18	Oryza sativa	GSM520638-18676	TCGGACCAGGCTTCATTCCCC	GGAATGTCGTCTGGCCTGAGA	down	4	0

Secondary structure

CTCCATTAATTTCAGTTCTTCCCCTCGATCATCTTGTTGAGAGGAATGTCGTCTGGCCTGAGATCGTACCACAGTGGTGGGTACACGTGGACGGTCTCGGACCAGGCTTCATTCCCCTCAACAACTCGTCGGAGTAGAGGAAGAAGACGGACAGTG
----------------------------------------------------------------------------------------------TCTCGGACCAGGCTTCATTCCC 	2
----------------------------------------------------------------------------------------------TCTCGGACCAGGCTTCATT 	2
----------------------------------------------------------------------------------------------TCTCGGACCAGGCTTCATTC 	5
----------------------------------------------------------------------------------------------TCTCGGACCAGGCTTCATTCC 	451
-----------------------------------------------------------------------------------------------CTCGGACCAGGCTTCATTCC 	2
-----------------------------------------------------------------------------------------------CTCGGACCAGGCTTCATTCCCC 	7
-----------------------------------------------------------------------------------------------CTCGGACCAGGCTTCATTCCC 	2
------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCC 	39
------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCCT 	2
------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCC 	3817
------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCC 	55
-------------------------------------------------------------------------------------------------CGGACCAGGCTTCATTCCCC 	2
-------------------------------------------------------------------------------------------------CGGACCAGGCTTCATTCCC 	1
--------------------------------------------------------------------------------------------------GGACCAGGCTTCATTCCCC 	28

Overlaps with: MNEST041942 MNEST048849
Overlaps with miRBase pre-miRNAs: osa-MIR166f
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
19	Oryza sativa	GSM520638-18676	TCTCGGACCAGGCTTCATTCC	AATGGAGGCTGATCCAAGATC	down	3	0

Secondary structure

GGAAGGGAAGCATGGTGTCTGGAATGGAGGCTGATCCAAGATCATTGCTTGGTGCAAAATACTAGGGCATTGTTGTAAGTGCCATTAGTTCTTTTTTGTTTCCGAGTTTGTTATCGAGGATCTCGGACCAGGCTTCATTCCTCACACCGTGCTTCCCGTT
------------TGGTGTCTGGAATGGAGGCTG 	3
----------------------AATGGAGGCTGATCCAAGATC 	3
------------------------------------------------------------------------------------------------------------------------TCTCGGACCAGGCTTCATT 	2
------------------------------------------------------------------------------------------------------------------------TCTCGGACCAGGCTTCATTC 	5
------------------------------------------------------------------------------------------------------------------------TCTCGGACCAGGCTTCATTCC 	451
-------------------------------------------------------------------------------------------------------------------------CTCGGACCAGGCTTCATTCC 	2
--------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCC 	39
--------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCT 	5
--------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCTC 	324
---------------------------------------------------------------------------------------------------------------------------CGGACCAGGCTTCATTCCT 	1
----------------------------------------------------------------------------------------------------------------------------GGACCAGGCTTCATTCCTC 	3

Overlaps with: MNEST041943 MNEST048850
Overlaps with miRBase pre-miRNAs: osa-MIR166g
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
20	Oryza sativa	GSM520638-18676	TCGGACCAGGCTTCATTCCC	GTTTGTTGTCTGGTTCAAGG	down	5	0

Secondary structure

CTCGGTTAAGGGGTTTGTTGTCTGGTTCAAGGCCTCCTGCTGTCCTACATCACATTTTTTTTTCTTTGTTCTGAATTTCTGATGGATGTGTGTGTGCATGATGCATGGCTGGTGGTGACCTCGGACCAGGCTTCATTCCCTTTAACCAG
----------------------------------------------------------------------------------------------------------------------CCTCGGACCAGGCTTCATTCC 	1
-----------------------------------------------------------------------------------------------------------------------CTCGGACCAGGCTTCATTCC 	2
-----------------------------------------------------------------------------------------------------------------------CTCGGACCAGGCTTCATTCCC 	2
------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCTTT 	1
------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCC 	39
------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCTT 	1
------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCT 	10
------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCC 	55
-------------------------------------------------------------------------------------------------------------------------CGGACCAGGCTTCATTCCC 	1
--------------------------------------------------------------------------------------------------------------------------GGACCAGGCTTCATTCCCT 	1

HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
21	Oryza sativa	GSM520638-18676	TCGGACCAGGCTTCATTCCCC	GGAATGTTGTCTGGCTCGGGG	down	3	0

Secondary structure

AGGGAGCCTTTTCATTTTGAGGGGAATGTTGTCTGGCTCGGGGCTACTTTTAATTTCTCTCTCTTTTGATATCTTCTTTTCTCGATCTCCTAGCTTGATCTTTTGATCTCTCAAATCGATCTTAAGAAAAAGATCAGTCAAAGAGATGAGAGTAGATGTCTGTAGATCTCGGACCAGGCTTCATTCCCCCCAAACAGAAGGGCTCCCA
---------------TTTGAGGGGAATGTTGTCTGG 	2
-----------------TGAGGGGAATGTTGTCTGGCTC 	21
-----------------TGAGGGGAATGTTGTCTGGCT 	26
-----------------TGAGGGGAATGTTGTCTGGC 	2
--------------------GGGGAATGTTGTCTGGCTCGG 	1
----------------------GGAATGTTGTCTGGCTCGGGG 	26
----------------------GGAATGTTGTCTGGCTCGGG 	1
------------------------AATGTTGTCTGGCTCGGGG 	1
---------------------------------------------------------------------------------------------------------------------------------------AGTCAAAGAGATGAGAGTAGA 	1
----------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTCGGACCAGGCTTCATTCCC 	2
----------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTCGGACCAGGCTTCATT 	2
----------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTCGGACCAGGCTTCATTC 	5
----------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTCGGACCAGGCTTCATTCC 	451
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCGGACCAGGCTTCATTCC 	2
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCGGACCAGGCTTCATTCCCC 	7
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCGGACCAGGCTTCATTCCC 	2
------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCC 	39
------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCCC 	13
------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCC 	3817
------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCC 	55
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGGACCAGGCTTCATTCCCC 	2
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGGACCAGGCTTCATTCCC 	1
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGACCAGGCTTCATTCCCC 	28
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGACCAGGCTTCATTCCCCC 	1
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCAGGCTTCATTCCCCCCAAA 	1

HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
22	Oryza sativa	GSM520638-18676	TCGGACCAGGCTTCATTCCCC	GGAATGTTGTCTGGCTCGAGG	down	3	0

Secondary structure

AGGAAGCTTTTTCACTTTGAGGGGAATGTTGTCTGGCTCGAGGTGCATGGAGAAACCTCTGATCGATCAGGTTTGATCTGTAGAGACTGATCTCGGACCAGGCTTCATTCCCCTCAAGTAAAGCTCCCATAT
---------------TTTGAGGGGAATGTTGTCTGG 	2
-----------------TGAGGGGAATGTTGTCTGGCTC 	21
-----------------TGAGGGGAATGTTGTCTGGCT 	26
-----------------TGAGGGGAATGTTGTCTGGC 	2
----------------------GGAATGTTGTCTGGCTCGAGGTGC 	1
----------------------GGAATGTTGTCTGGCTCGA 	1
----------------------GGAATGTTGTCTGGCTCGAGG 	75
-----------------------GAATGTTGTCTGGCTCGAGGT 	1
------------------------AATGTTGTCTGGCTCGAGGTG 	1
-------------------------ATGTTGTCTGGCTCGAGGTGCA 	1
-------------------------ATGTTGTCTGGCTCGAGGTGC 	3
------------------------------------------------------------------------------------------TCTCGGACCAGGCTTCATTCCC 	2
------------------------------------------------------------------------------------------TCTCGGACCAGGCTTCATT 	2
------------------------------------------------------------------------------------------TCTCGGACCAGGCTTCATTC 	5
------------------------------------------------------------------------------------------TCTCGGACCAGGCTTCATTCC 	451
-------------------------------------------------------------------------------------------CTCGGACCAGGCTTCATTCC 	2
-------------------------------------------------------------------------------------------CTCGGACCAGGCTTCATTCCCC 	7
-------------------------------------------------------------------------------------------CTCGGACCAGGCTTCATTCCC 	2
--------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCC 	39
--------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCCT 	2
--------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCC 	3817
--------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCC 	55
---------------------------------------------------------------------------------------------CGGACCAGGCTTCATTCCCC 	2
---------------------------------------------------------------------------------------------CGGACCAGGCTTCATTCCC 	1
----------------------------------------------------------------------------------------------GGACCAGGCTTCATTCCCC 	28

Overlaps with: MNEST045417
Overlaps with miRBase pre-miRNAs: osa-MIR166d
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
23	Oryza sativa	GSM520638-18676	TCGGACCAGGCTTCATTCCTC	GGAATGTTGGCTGGCTCGAGG	down	2	2

Secondary structure

GGTGGCTTGTGGGGAATGTTGGCTGGCTCGAGGTATCCACATCTTAATTCCTCTCCGGCGATCGAGCCGGCTCGGGCGTGTGGAAGCGTCGGACCAGGCTTCATTCCTCGCAAGCCGA
----------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCC 	39
----------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCT 	5
----------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCTC 	324
-----------------------------------------------------------------------------------------CGGACCAGGCTTCATTCCT 	1
------------------------------------------------------------------------------------------GGACCAGGCTTCATTCCTC 	3

Overlaps with: MNEST041944 MNEST048851
Overlaps with miRBase pre-miRNAs: osa-MIR166h
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
24	Oryza sativa	GSM520638-18676	TCGGACCAGGCTTCATTCCCC	GGAATGTTGTCTGGTCCGAGA	down	2	0

Secondary structure

TTCATTTTTATGGCAGTTGAGGGGAATGTTGTCTGGTCCGAGACCTAACACCGGGCGGAATGGCGGATTCAGCTGCAGCTAAGCAAGCTAGGTGGGGGGTTTCGGACCAGGCTTCATTCCCCCCAACTCAACTGTTTAGTT
---------------GTTGAGGGGAATGTTGTCTGG 	1
-----------------TGAGGGGAATGTTGTCTGGTC 	4
----------------------GGAATGTTGTCTGGTCCGAGA 	11
------------------------AATGTTGTCTGGTCCGAGAC 	1
------------------------AATGTTGTCTGGTCCGAGACC 	2
-------------------------ATGTTGTCTGGTCCGAGACC 	1
-------------------------ATGTTGTCTGGTCCGAGACCT 	63
--------------------------------------------------------------------------------------------------GTTTCGGACCAGGCTTCATTC 	1
---------------------------------------------------------------------------------------------------TTTCGGACCAGGCTTCATTCC 	13
----------------------------------------------------------------------------------------------------TTCGGACCAGGCTTCATTC 	4
----------------------------------------------------------------------------------------------------TTCGGACCAGGCTTCATTCCCC 	3
----------------------------------------------------------------------------------------------------TTCGGACCAGGCTTCATTCC 	13
----------------------------------------------------------------------------------------------------TTCGGACCAGGCTTCATTCCC 	1509
-----------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCC 	39
-----------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCCC 	13
-----------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCC 	3817
-----------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCC 	55
------------------------------------------------------------------------------------------------------CGGACCAGGCTTCATTCCCC 	2
------------------------------------------------------------------------------------------------------CGGACCAGGCTTCATTCCC 	1
-------------------------------------------------------------------------------------------------------GGACCAGGCTTCATTCCCC 	28
-------------------------------------------------------------------------------------------------------GGACCAGGCTTCATTCCCCC 	1

Overlaps with: MNEST041939 MNEST048846
Overlaps with miRBase pre-miRNAs: osa-MIR166c hvu-MIR166b
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
25	Oryza sativa	GSM686040-31373	TCGGACCAGGCTTCATTCCCC	GGAATGTTGTCTGGTTCAAGG	down	4	0

Secondary structure

GGGAAAGGAAAATAGATAGTATGAAGCTATTTGCTTCTGAGTGGAATGTTGTCTGGTTCAAGGTCTCATGCACCTTGCGGTTTTGAGGATGATTTGTGCAAGGTTTTTCATTCCTCTCATCCGTGGGATCTCGGACCAGGCTTCATTCCCCTCAGAGATAGCTTCAAAACATTAGATCTATAGTTCTCGC
-----------------------------------TCTGAGTGGAATGTTGTCTGG 	1
-----------------------------------------TGGAATGTTGTCTGGTTCAAG 	2
------------------------------------------------TTGTCTGGTTCAAGGTCTCATGC 	1
-------------------------------------------------------------------------------------------------------------------------------ATCTCGGACCAGGCTTCATTCCCC 	1
--------------------------------------------------------------------------------------------------------------------------------TCTCGGACCAGGCTTCATTCC 	248
--------------------------------------------------------------------------------------------------------------------------------TCTCGGACCAGGCTTCATTC 	11
---------------------------------------------------------------------------------------------------------------------------------CTCGGACCAGGCTTCATTCCCC 	13
---------------------------------------------------------------------------------------------------------------------------------CTCGGACCAGGCTTCATTCC 	1
----------------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCCT 	8
----------------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCC 	8093
----------------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCC 	107
----------------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCC 	143
-----------------------------------------------------------------------------------------------------------------------------------CGGACCAGGCTTCATTCCCC 	52
------------------------------------------------------------------------------------------------------------------------------------GGACCAGGCTTCATTCCCC 	472

Overlaps with: MNEST041937 MNEST048844
Overlaps with miRBase pre-miRNAs: osa-MIR166a
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
26	Oryza sativa	GSM686040-31373	TCGGACCAGGCTTCATTCCCC	GGAATGTCGTCTGGCCTGAGA	down	4	0

Secondary structure

CTCCATTAATTTCAGTTCTTCCCCTCGATCATCTTGTTGAGAGGAATGTCGTCTGGCCTGAGATCGTACCACAGTGGTGGGTACACGTGGACGGTCTCGGACCAGGCTTCATTCCCCTCAACAACTCGTCGGAGTAGAGGAAGAAGACGGACAGTG
------------------------------------------------------------------------------GGGTACACGTGGACGGTCTCGGAC 	1
----------------------------------------------------------------------------------------------TCTCGGACCAGGCTTCATTCC 	248
----------------------------------------------------------------------------------------------TCTCGGACCAGGCTTCATTC 	11
-----------------------------------------------------------------------------------------------CTCGGACCAGGCTTCATTCCCC 	13
-----------------------------------------------------------------------------------------------CTCGGACCAGGCTTCATTCC 	1
------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCCT 	8
------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCC 	8093
------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCC 	107
------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCC 	143
-------------------------------------------------------------------------------------------------CGGACCAGGCTTCATTCCCC 	52
--------------------------------------------------------------------------------------------------GGACCAGGCTTCATTCCCC 	472

Overlaps with: MNEST041942 MNEST048849
Overlaps with miRBase pre-miRNAs: osa-MIR166f
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
27	Oryza sativa	GSM686040-31373	TCTCGGACCAGGCTTCATTCC	AATGGAGGCTGATCCAAGATC	down	3	0

Secondary structure

GGAAGGGAAGCATGGTGTCTGGAATGGAGGCTGATCCAAGATCATTGCTTGGTGCAAAATACTAGGGCATTGTTGTAAGTGCCATTAGTTCTTTTTTGTTTCCGAGTTTGTTATCGAGGATCTCGGACCAGGCTTCATTCCTCACACCGTGCTTCCCGTT
------------------------------------------------------------------------------------------------------------------------TCTCGGACCAGGCTTCATTCC 	248
------------------------------------------------------------------------------------------------------------------------TCTCGGACCAGGCTTCATTC 	11
-------------------------------------------------------------------------------------------------------------------------CTCGGACCAGGCTTCATTCC 	1
--------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCTC 	39
--------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCT 	10
--------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCC 	143
----------------------------------------------------------------------------------------------------------------------------GGACCAGGCTTCATTCCTC 	2
------------------------------------------------------------------------------------------------------------------------------ACCAGGCTTCATTCCTCACAC 	1

Overlaps with: MNEST041943 MNEST048850
Overlaps with miRBase pre-miRNAs: osa-MIR166g
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
28	Oryza sativa	GSM686040-31373	TCGGACCAGGCTTCATTCC	TTTGTTGTCTGGTTCAAGG	down	5	0

Secondary structure

TCGGTTAAGGGGTTTGTTGTCTGGTTCAAGGCCTCCTGCTGTCCTACATCACATTTTTTTTTCTTTGTTCTGAATTTCTGATGGATGTGTGTGTGCATGATGCATGGCTGGTGGTGACCTCGGACCAGGCTTCATTCCCTTTAACCA
---------------------------------------------------------------------------------------------------------------------CCTCGGACCAGGCTTCATTCC 	1
----------------------------------------------------------------------------------------------------------------------CTCGGACCAGGCTTCATTCC 	1
-----------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCTT 	1
-----------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCT 	10
-----------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCC 	107
-----------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCC 	143

HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
29	Oryza sativa	GSM686040-31373	TCGGACCAGGCTTCATTCCCC	GGAATGTTGTCTGGCTCGGGG	down	3	0

Secondary structure

AGGGAGCCTTTTCATTTTGAGGGGAATGTTGTCTGGCTCGGGGCTACTTTTAATTTCTCTCTCTTTTGATATCTTCTTTTCTCGATCTCCTAGCTTGATCTTTTGATCTCTCAAATCGATCTTAAGAAAAAGATCAGTCAAAGAGATGAGAGTAGATGTCTGTAGATCTCGGACCAGGCTTCATTCCCCCCAAACAGAAGGGCTCCCA
-----------------TGAGGGGAATGTTGTCTGGCTC 	1
-----------------TGAGGGGAATGTTGTCTGGCT 	4
--------------------GGGGAATGTTGTCTGGCTCGG 	3
----------------------GGAATGTTGTCTGGCTCGGGG 	2
---------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCTCGGACCAGGCTTCATTCCCC 	1
----------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTCGGACCAGGCTTCATTCC 	248
----------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTCGGACCAGGCTTCATTC 	11
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCGGACCAGGCTTCATTCCCC 	13
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCGGACCAGGCTTCATTCC 	1
------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCC 	8093
------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCC 	107
------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCC 	143
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGGACCAGGCTTCATTCCCC 	52
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGACCAGGCTTCATTCCCC 	472

HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
30	Oryza sativa	GSM686040-31373	TCGGACCAGGCTTCATTCCCC	GGAATGTTGTCTGGCTCGAGG	down	3	0

Secondary structure

AGGAAGCTTTTTCACTTTGAGGGGAATGTTGTCTGGCTCGAGGTGCATGGAGAAACCTCTGATCGATCAGGTTTGATCTGTAGAGACTGATCTCGGACCAGGCTTCATTCCCCTCAAGTAAAGCTCCCATAT
-----------------TGAGGGGAATGTTGTCTGGCTC 	1
-----------------TGAGGGGAATGTTGTCTGGCT 	4
----------------------GGAATGTTGTCTGGCTCGAGG 	2
-----------------------------------------------------------------------------------------ATCTCGGACCAGGCTTCATTCCCC 	1
------------------------------------------------------------------------------------------TCTCGGACCAGGCTTCATTCC 	248
------------------------------------------------------------------------------------------TCTCGGACCAGGCTTCATTC 	11
-------------------------------------------------------------------------------------------CTCGGACCAGGCTTCATTCCCC 	13
-------------------------------------------------------------------------------------------CTCGGACCAGGCTTCATTCC 	1
--------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCCT 	8
--------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCC 	8093
--------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCC 	107
--------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCC 	143
---------------------------------------------------------------------------------------------CGGACCAGGCTTCATTCCCC 	52
----------------------------------------------------------------------------------------------GGACCAGGCTTCATTCCCC 	472

Overlaps with: MNEST045417
Overlaps with miRBase pre-miRNAs: osa-MIR166d
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
31	Oryza sativa	GSM686040-31373	TCGGACCAGGCTTCATTCC	AATGTTGGCTGGCTCGAGG	down	2	2

Secondary structure

TGGCTTGTGGGGAATGTTGGCTGGCTCGAGGTATCCACATCTTAATTCCTCTCCGGCGATCGAGCCGGCTCGGGCGTGTGGAAGCGTCGGACCAGGCTTCATTCCTCGCAAGCC
--------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCTC 	39
--------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCT 	10
--------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCC 	143
----------------------------------------------------------------------------------------GGACCAGGCTTCATTCCTC 	2

Overlaps with: MNEST041944 MNEST048851
Overlaps with miRBase pre-miRNAs: osa-MIR166h
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
32	Oryza sativa	GSM686040-31373	TCGGACCAGGCTTCATTCCCC	GGAATGTTGTCTGGTCCGAGA	down	2	0

Secondary structure

TTCATTTTTATGGCAGTTGAGGGGAATGTTGTCTGGTCCGAGACCTAACACCGGGCGGAATGGCGGATTCAGCTGCAGCTAAGCAAGCTAGGTGGGGGGTTTCGGACCAGGCTTCATTCCCCCCAACTCAACTGTTTAGTT
--------------AGTTGAGGGGAATGTTGTCT 	1
---------------GTTGAGGGGAATGTTGTCTGG 	1
-----------------TGAGGGGAATGTTGTCTGGTC 	2
---------------------------------------------------------------------------------------------------TTTCGGACCAGGCTTCATTCCC 	1
----------------------------------------------------------------------------------------------------TTCGGACCAGGCTTCATTCCCC 	1
----------------------------------------------------------------------------------------------------TTCGGACCAGGCTTCATTCCC 	14
-----------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCC 	8093
-----------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCC 	107
-----------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCC 	143
------------------------------------------------------------------------------------------------------CGGACCAGGCTTCATTCCCC 	52
-------------------------------------------------------------------------------------------------------GGACCAGGCTTCATTCCCC 	472

Overlaps with: MNEST041939 MNEST048846
Overlaps with miRBase pre-miRNAs: osa-MIR166c hvu-MIR166b
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
33	Oryza sativa	GSM520640-18679	TCGGACCAGGCTTCATTCCCC	GGAATGTTGTCTGGTTCAAGG	down	4	0

Secondary structure

GGGAAAGGAAAATAGATAGTATGAAGCTATTTGCTTCTGAGTGGAATGTTGTCTGGTTCAAGGTCTCATGCACCTTGCGGTTTTGAGGATGATTTGTGCAAGGTTTTTCATTCCTCTCATCCGTGGGATCTCGGACCAGGCTTCATTCCCCTCAGAGATAGCTTCAAAACATTAGATCTATAGTTCTCGC
-----------------------------------------TGGAATGTTGTCTGGTTCAAG 	1
-----------------------------------------TGGAATGTTGTCTGGTTCAA 	1
------------------------------------------GGAATGTTGTCTGGTTCAAGG 	71
------------------------------------------GGAATGTTGTCTGGTTCAAG 	2
------------------------------------------GGAATGTTGTCTGGTTCAA 	2
--------------------------------------------AATGTTGTCTGGTTCAAGGTCTCA 	1
--------------------------------------------------------------------------------------------------------------------------------TCTCGGACCAGGCTTCATTC 	4
--------------------------------------------------------------------------------------------------------------------------------TCTCGGACCAGGCTTCATTCC 	396
---------------------------------------------------------------------------------------------------------------------------------CTCGGACCAGGCTTCATTCCCC 	2
---------------------------------------------------------------------------------------------------------------------------------CTCGGACCAGGCTTCATTCCC 	1
----------------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCC 	24
----------------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCCT 	2
----------------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCC 	2747
----------------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCC 	33
-----------------------------------------------------------------------------------------------------------------------------------CGGACCAGGCTTCATTCCCC 	5
------------------------------------------------------------------------------------------------------------------------------------GGACCAGGCTTCATTCCCC 	13

Overlaps with: MNEST041937 MNEST048844
Overlaps with miRBase pre-miRNAs: osa-MIR166a
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
34	Oryza sativa	GSM520640-18679	TCGGACCAGGCTTCATTCCCC	GGAATGTCGTCTGGCCTGAGA	down	4	0

Secondary structure

CTCCATTAATTTCAGTTCTTCCCCTCGATCATCTTGTTGAGAGGAATGTCGTCTGGCCTGAGATCGTACCACAGTGGTGGGTACACGTGGACGGTCTCGGACCAGGCTTCATTCCCCTCAACAACTCGTCGGAGTAGAGGAAGAAGACGGACAGTG
----------------------------------------------------------------------------------------------TCTCGGACCAGGCTTCATTC 	4
----------------------------------------------------------------------------------------------TCTCGGACCAGGCTTCATTCC 	396
-----------------------------------------------------------------------------------------------CTCGGACCAGGCTTCATTCCCC 	2
-----------------------------------------------------------------------------------------------CTCGGACCAGGCTTCATTCCC 	1
------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCC 	24
------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCCT 	2
------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCC 	2747
------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCC 	33
-------------------------------------------------------------------------------------------------CGGACCAGGCTTCATTCCCC 	5
--------------------------------------------------------------------------------------------------GGACCAGGCTTCATTCCCC 	13

Overlaps with: MNEST041942 MNEST048849
Overlaps with miRBase pre-miRNAs: osa-MIR166f
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
35	Oryza sativa	GSM520640-18679	TCTCGGACCAGGCTTCATTCC	AATGGAGGCTGATCCAAGATC	down	3	0

Secondary structure

GGAAGGGAAGCATGGTGTCTGGAATGGAGGCTGATCCAAGATCATTGCTTGGTGCAAAATACTAGGGCATTGTTGTAAGTGCCATTAGTTCTTTTTTGTTTCCGAGTTTGTTATCGAGGATCTCGGACCAGGCTTCATTCCTCACACCGTGCTTCCCGTT
------------TGGTGTCTGGAATGGAGGCTG 	5
----------------------AATGGAGGCTGATCCAAGATC 	2
------------------------------------------------------------------------------------------------------------------------TCTCGGACCAGGCTTCATTC 	4
------------------------------------------------------------------------------------------------------------------------TCTCGGACCAGGCTTCATTCC 	396
--------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCC 	24
--------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCTC 	207
--------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCT 	8

Overlaps with: MNEST041943 MNEST048850
Overlaps with miRBase pre-miRNAs: osa-MIR166g
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
36	Oryza sativa	GSM520640-18679	TCGGACCAGGCTTCATTCCCC	GGAATGTTGTCTGGCTCGGGG	down	3	0

Secondary structure

AGGGAGCCTTTTCATTTTGAGGGGAATGTTGTCTGGCTCGGGGCTACTTTTAATTTCTCTCTCTTTTGATATCTTCTTTTCTCGATCTCCTAGCTTGATCTTTTGATCTCTCAAATCGATCTTAAGAAAAAGATCAGTCAAAGAGATGAGAGTAGATGTCTGTAGATCTCGGACCAGGCTTCATTCCCCCCAAACAGAAGGGCTCCCA
-----------------TGAGGGGAATGTTGTCTGGC 	1
-----------------TGAGGGGAATGTTGTCTGGCTC 	37
-----------------TGAGGGGAATGTTGTCTGGCT 	12
-----------------TGAGGGGAATGTTGTCTGG 	1
-------------------AGGGGAATGTTGTCTGGCTC 	1
----------------------GGAATGTTGTCTGGCTCGGGGC 	2
----------------------GGAATGTTGTCTGGCTCGGGG 	15
------------------------AATGTTGTCTGGCTCGGGG 	1
----------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTCGGACCAGGCTTCATTC 	4
----------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTCGGACCAGGCTTCATTCC 	396
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCGGACCAGGCTTCATTCCCC 	2
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCGGACCAGGCTTCATTCCC 	1
------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCC 	24
------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCCC 	16
------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCC 	2747
------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCC 	33
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGGACCAGGCTTCATTCCCC 	5
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGACCAGGCTTCATTCCCC 	13

HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
37	Oryza sativa	GSM520640-18679	TCGGACCAGGCTTCATTCCCC	GGAATGTTGTCTGGCTCGAGG	down	3	0

Secondary structure

AGGAAGCTTTTTCACTTTGAGGGGAATGTTGTCTGGCTCGAGGTGCATGGAGAAACCTCTGATCGATCAGGTTTGATCTGTAGAGACTGATCTCGGACCAGGCTTCATTCCCCTCAAGTAAAGCTCCCATAT
-----------------TGAGGGGAATGTTGTCTGGC 	1
-----------------TGAGGGGAATGTTGTCTGGCTC 	37
-----------------TGAGGGGAATGTTGTCTGGCT 	12
-----------------TGAGGGGAATGTTGTCTGG 	1
-------------------AGGGGAATGTTGTCTGGCTC 	1
---------------------GGGAATGTTGTCTGGCTCGAG 	4
---------------------GGGAATGTTGTCTGGCTCGA 	1
----------------------GGAATGTTGTCTGGCTCGAGGTGCA 	1
----------------------GGAATGTTGTCTGGCTCGAGGT 	2
----------------------GGAATGTTGTCTGGCTCGAG 	1
----------------------GGAATGTTGTCTGGCTCGA 	1
----------------------GGAATGTTGTCTGGCTCGAGG 	61
-----------------------GAATGTTGTCTGGCTCGAGGT 	1
------------------------AATGTTGTCTGGCTCGAGGTG 	2
-------------------------ATGTTGTCTGGCTCGAGGTGC 	3
---------------------------------------------------GAAACCTCTGATCGATCAGGT 	1
------------------------------------------------------------------------------------------TCTCGGACCAGGCTTCATTC 	4
------------------------------------------------------------------------------------------TCTCGGACCAGGCTTCATTCC 	396
-------------------------------------------------------------------------------------------CTCGGACCAGGCTTCATTCCCC 	2
-------------------------------------------------------------------------------------------CTCGGACCAGGCTTCATTCCC 	1
--------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCC 	24
--------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCCT 	2
--------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCC 	2747
--------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCC 	33
---------------------------------------------------------------------------------------------CGGACCAGGCTTCATTCCCC 	5
----------------------------------------------------------------------------------------------GGACCAGGCTTCATTCCCC 	13

Overlaps with: MNEST045417
Overlaps with miRBase pre-miRNAs: osa-MIR166d
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
38	Oryza sativa	GSM520640-18679	TCGGACCAGGCTTCATTCCTC	GGAATGTTGGCTGGCTCGAGG	down	2	2

Secondary structure

GGTGGCTTGTGGGGAATGTTGGCTGGCTCGAGGTATCCACATCTTAATTCCTCTCCGGCGATCGAGCCGGCTCGGGCGTGTGGAAGCGTCGGACCAGGCTTCATTCCTCGCAAGCCGA
------------GGAATGTTGGCTGGCTCGAGG 	12
----------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCC 	24
----------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCTC 	207
----------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCT 	8

Overlaps with: MNEST041944 MNEST048851
Overlaps with miRBase pre-miRNAs: osa-MIR166h
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
39	Oryza sativa	GSM520640-18679	TCGGACCAGGCTTCATTCCCC	GGAATGTTGTCTGGTCCGAGA	down	2	0

Secondary structure

TTCATTTTTATGGCAGTTGAGGGGAATGTTGTCTGGTCCGAGACCTAACACCGGGCGGAATGGCGGATTCAGCTGCAGCTAAGCAAGCTAGGTGGGGGGTTTCGGACCAGGCTTCATTCCCCCCAACTCAACTGTTTAGTT
-----------------TGAGGGGAATGTTGTCTGGTC 	3
-----------------TGAGGGGAATGTTGTCTGG 	1
----------------------GGAATGTTGTCTGGTCCGAG 	1
----------------------GGAATGTTGTCTGGTCCGAGA 	9
-----------------------GAATGTTGTCTGGTCCGAGA 	1
-----------------------GAATGTTGTCTGGTCCGAGAC 	1
-------------------------ATGTTGTCTGGTCCGAGACCT 	46
-------------------------ATGTTGTCTGGTCCGAGAC 	2
---------------------------------------------------------------------------------------------------TTTCGGACCAGGCTTCATTCC 	8
----------------------------------------------------------------------------------------------------TTCGGACCAGGCTTCATTC 	1
----------------------------------------------------------------------------------------------------TTCGGACCAGGCTTCATTCCCC 	8
----------------------------------------------------------------------------------------------------TTCGGACCAGGCTTCATTCC 	5
----------------------------------------------------------------------------------------------------TTCGGACCAGGCTTCATTCCC 	978
-----------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCC 	24
-----------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCCC 	16
-----------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCC 	2747
-----------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCC 	33
------------------------------------------------------------------------------------------------------CGGACCAGGCTTCATTCCCC 	5
-------------------------------------------------------------------------------------------------------GGACCAGGCTTCATTCCCC 	13

Overlaps with: MNEST041939 MNEST048846
Overlaps with miRBase pre-miRNAs: osa-MIR166c hvu-MIR166b
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
40	Oryza sativa	GSM571077-22529	TCGGACCAGGCTTCATTCCCC	GGAATGTTGTCTGGTTCAAGG	down	4	0

Secondary structure

GGGAAAGGAAAATAGATAGTATGAAGCTATTTGCTTCTGAGTGGAATGTTGTCTGGTTCAAGGTCTCATGCACCTTGCGGTTTTGAGGATGATTTGTGCAAGGTTTTTCATTCCTCTCATCCGTGGGATCTCGGACCAGGCTTCATTCCCCTCAGAGATAGCTTCAAAACATTAGATCTATAGTTCTCGC
-----------------------------------------TGGAATGTTGTCTGGTTCAAGGTC 	2
-----------------------------------------TGGAATGTTGTCTGGTTCAA 	1
------------------------------------------GGAATGTTGTCTGGTTCAAGG 	10
------------------------------------------GGAATGTTGTCTGGTTCAAG 	1
-------------------------------------------------------------------------------------AGGATGATTTGTGCAAGGTTTTT 	1
-------------------------------------------------------------------------------------------------------------------------------ATCTCGGACCAGGCTTCATTCCCC 	6
--------------------------------------------------------------------------------------------------------------------------------TCTCGGACCAGGCTTCATTCC 	713
--------------------------------------------------------------------------------------------------------------------------------TCTCGGACCAGGCTTCATTC 	6
--------------------------------------------------------------------------------------------------------------------------------TCTCGGACCAGGCTTCATT 	2
---------------------------------------------------------------------------------------------------------------------------------CTCGGACCAGGCTTCATTCCCC 	17
---------------------------------------------------------------------------------------------------------------------------------CTCGGACCAGGCTTCATTCC 	39
---------------------------------------------------------------------------------------------------------------------------------CTCGGACCAGGCTTCATTC 	1
---------------------------------------------------------------------------------------------------------------------------------CTCGGACCAGGCTTCATTCCC 	1
----------------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCCT 	19
----------------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCC 	6268
----------------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCC 	145
----------------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCC 	278
-----------------------------------------------------------------------------------------------------------------------------------CGGACCAGGCTTCATTCCCC 	173
-----------------------------------------------------------------------------------------------------------------------------------CGGACCAGGCTTCATTCCC 	2
------------------------------------------------------------------------------------------------------------------------------------GGACCAGGCTTCATTCCCC 	67
------------------------------------------------------------------------------------------------------------------------------------GGACCAGGCTTCATTCCCCT 	1

Overlaps with: MNEST041937 MNEST048844
Overlaps with miRBase pre-miRNAs: osa-MIR166a
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
41	Oryza sativa	GSM571077-22529	TCGGACCAGGCTTCATTCCCC	GGAATGTCGTCTGGCCTGAGA	down	4	0

Secondary structure

CTCCATTAATTTCAGTTCTTCCCCTCGATCATCTTGTTGAGAGGAATGTCGTCTGGCCTGAGATCGTACCACAGTGGTGGGTACACGTGGACGGTCTCGGACCAGGCTTCATTCCCCTCAACAACTCGTCGGAGTAGAGGAAGAAGACGGACAGTG
----------------------------------------------------------------------------------------------TCTCGGACCAGGCTTCATTCC 	713
----------------------------------------------------------------------------------------------TCTCGGACCAGGCTTCATTC 	6
----------------------------------------------------------------------------------------------TCTCGGACCAGGCTTCATT 	2
-----------------------------------------------------------------------------------------------CTCGGACCAGGCTTCATTCCCC 	17
-----------------------------------------------------------------------------------------------CTCGGACCAGGCTTCATTCC 	39
-----------------------------------------------------------------------------------------------CTCGGACCAGGCTTCATTC 	1
-----------------------------------------------------------------------------------------------CTCGGACCAGGCTTCATTCCC 	1
------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCCT 	19
------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCC 	6268
------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCC 	145
------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCC 	278
-------------------------------------------------------------------------------------------------CGGACCAGGCTTCATTCCCC 	173
-------------------------------------------------------------------------------------------------CGGACCAGGCTTCATTCCC 	2
--------------------------------------------------------------------------------------------------GGACCAGGCTTCATTCCCC 	67
--------------------------------------------------------------------------------------------------GGACCAGGCTTCATTCCCCT 	1

Overlaps with: MNEST041942 MNEST048849
Overlaps with miRBase pre-miRNAs: osa-MIR166f
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
42	Oryza sativa	GSM571077-22529	TCGGACCAGGCTTCATTCCTC	GGAATGGAGGCTGATCCAAGA	down	5	0

Secondary structure

GAGGAAGGGAAGCATGGTGTCTGGAATGGAGGCTGATCCAAGATCATTGCTTGGTGCAAAATACTAGGGCATTGTTGTAAGTGCCATTAGTTCTTTTTTGTTTCCGAGTTTGTTATCGAGGATCTCGGACCAGGCTTCATTCCTCACACCGTGCTTCCCGTTGC
------------------------AATGGAGGCTGATCCAAGATC 	1
--------------------------------------------------------------------------------------------------------------------------TCTCGGACCAGGCTTCATTCC 	713
--------------------------------------------------------------------------------------------------------------------------TCTCGGACCAGGCTTCATTCCT 	6
--------------------------------------------------------------------------------------------------------------------------TCTCGGACCAGGCTTCATTC 	6
--------------------------------------------------------------------------------------------------------------------------TCTCGGACCAGGCTTCATT 	2
---------------------------------------------------------------------------------------------------------------------------CTCGGACCAGGCTTCATTCC 	39
---------------------------------------------------------------------------------------------------------------------------CTCGGACCAGGCTTCATTCCTC 	7
---------------------------------------------------------------------------------------------------------------------------CTCGGACCAGGCTTCATTC 	1
----------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCTC 	1417
----------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCT 	19
----------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCC 	278
----------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCTCA 	1
-----------------------------------------------------------------------------------------------------------------------------CGGACCAGGCTTCATTCCTC 	42
-----------------------------------------------------------------------------------------------------------------------------CGGACCAGGCTTCATTCCT 	2
------------------------------------------------------------------------------------------------------------------------------GGACCAGGCTTCATTCCTC 	14

Overlaps with: MNEST041943 MNEST048850
Overlaps with miRBase pre-miRNAs: osa-MIR166g
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
43	Oryza sativa	GSM571077-22529	TCGGACCAGGCTTCATTCC	TTTGTTGTCTGGTTCAAGG	down	5	0

Secondary structure

TCGGTTAAGGGGTTTGTTGTCTGGTTCAAGGCCTCCTGCTGTCCTACATCACATTTTTTTTTCTTTGTTCTGAATTTCTGATGGATGTGTGTGTGCATGATGCATGGCTGGTGGTGACCTCGGACCAGGCTTCATTCCCTTTAACCA
---------------------------------------------------------------------------------------------------------------------CCTCGGACCAGGCTTCATTCC 	1
----------------------------------------------------------------------------------------------------------------------CTCGGACCAGGCTTCATTCC 	39
----------------------------------------------------------------------------------------------------------------------CTCGGACCAGGCTTCATTC 	1
----------------------------------------------------------------------------------------------------------------------CTCGGACCAGGCTTCATTCCCT 	1
----------------------------------------------------------------------------------------------------------------------CTCGGACCAGGCTTCATTCCC 	1
-----------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCT 	56
-----------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCC 	145
-----------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCC 	278
-----------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCTT 	4
-----------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCTTT 	2
------------------------------------------------------------------------------------------------------------------------CGGACCAGGCTTCATTCCCT 	4
------------------------------------------------------------------------------------------------------------------------CGGACCAGGCTTCATTCCC 	2
-------------------------------------------------------------------------------------------------------------------------GGACCAGGCTTCATTCCCT 	3

HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
44	Oryza sativa	GSM571077-22529	TCGGACCAGGCTTCATTCCCC	GGAATGTTGTCTGGCTCGGGG	down	3	0

Secondary structure

AGGGAGCCTTTTCATTTTGAGGGGAATGTTGTCTGGCTCGGGGCTACTTTTAATTTCTCTCTCTTTTGATATCTTCTTTTCTCGATCTCCTAGCTTGATCTTTTGATCTCTCAAATCGATCTTAAGAAAAAGATCAGTCAAAGAGATGAGAGTAGATGTCTGTAGATCTCGGACCAGGCTTCATTCCCCCCAAACAGAAGGGCTCCCA
-----------------TGAGGGGAATGTTGTCTGGCT 	4
-----------------TGAGGGGAATGTTGTCTGGCTC 	3
------------------GAGGGGAATGTTGTCTGGCTC 	1
----------------------GGAATGTTGTCTGGCTCGGGG 	7
----------------------GGAATGTTGTCTGGCTCGGG 	3
----------------------GGAATGTTGTCTGGCTCGG 	1
-----------------------GAATGTTGTCTGGCTCGGGG 	4
---------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCTCGGACCAGGCTTCATTCCCC 	6
----------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTCGGACCAGGCTTCATTCC 	713
----------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTCGGACCAGGCTTCATTC 	6
----------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTCGGACCAGGCTTCATT 	2
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCGGACCAGGCTTCATTCCCC 	17
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCGGACCAGGCTTCATTCC 	39
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCGGACCAGGCTTCATTC 	1
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCGGACCAGGCTTCATTCCC 	1
------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCC 	6268
------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCC 	145
------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCC 	278
------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCCCC 	1
------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCCC 	1
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGGACCAGGCTTCATTCCCC 	173
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGGACCAGGCTTCATTCCC 	2
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGACCAGGCTTCATTCCCC 	67

HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
45	Oryza sativa	GSM571077-22529	TCGGACCAGGCTTCATTCCCC	GGAATGTTGTCTGGCTCGAGG	down	3	0

Secondary structure

AGGAAGCTTTTTCACTTTGAGGGGAATGTTGTCTGGCTCGAGGTGCATGGAGAAACCTCTGATCGATCAGGTTTGATCTGTAGAGACTGATCTCGGACCAGGCTTCATTCCCCTCAAGTAAAGCTCCCATAT
-----------------TGAGGGGAATGTTGTCTGGCT 	4
-----------------TGAGGGGAATGTTGTCTGGCTC 	3
------------------GAGGGGAATGTTGTCTGGCTC 	1
----------------------GGAATGTTGTCTGGCTCGAGG 	13
----------------------GGAATGTTGTCTGGCTCGAGGT 	1
-----------------------GAATGTTGTCTGGCTCGAGG 	1
------------------------AATGTTGTCTGGCTCGAGGTG 	1
-------------------------ATGTTGTCTGGCTCGAGGTGC 	1
-----------------------------------------------------------------------------------------ATCTCGGACCAGGCTTCATTCCCC 	6
------------------------------------------------------------------------------------------TCTCGGACCAGGCTTCATTCC 	713
------------------------------------------------------------------------------------------TCTCGGACCAGGCTTCATTC 	6
------------------------------------------------------------------------------------------TCTCGGACCAGGCTTCATT 	2
-------------------------------------------------------------------------------------------CTCGGACCAGGCTTCATTCCCC 	17
-------------------------------------------------------------------------------------------CTCGGACCAGGCTTCATTCC 	39
-------------------------------------------------------------------------------------------CTCGGACCAGGCTTCATTC 	1
-------------------------------------------------------------------------------------------CTCGGACCAGGCTTCATTCCC 	1
--------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCCT 	19
--------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCC 	6268
--------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCC 	145
--------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCC 	278
---------------------------------------------------------------------------------------------CGGACCAGGCTTCATTCCCC 	173
---------------------------------------------------------------------------------------------CGGACCAGGCTTCATTCCC 	2
----------------------------------------------------------------------------------------------GGACCAGGCTTCATTCCCC 	67
----------------------------------------------------------------------------------------------GGACCAGGCTTCATTCCCCT 	1

Overlaps with: MNEST045417
Overlaps with miRBase pre-miRNAs: osa-MIR166d
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
46	Oryza sativa	GSM571077-22529	TCGGACCAGGCTTCATTCCTC	GGAATGTTGGCTGGCTCGAGG	down	2	2

Secondary structure

GGTGGCTTGTGGGGAATGTTGGCTGGCTCGAGGTATCCACATCTTAATTCCTCTCCGGCGATCGAGCCGGCTCGGGCGTGTGGAAGCGTCGGACCAGGCTTCATTCCTCGCAAGCCGA
------------GGAATGTTGGCTGGCTCGAGG 	20
----------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCTC 	1417
----------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCT 	19
----------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCC 	278
-----------------------------------------------------------------------------------------CGGACCAGGCTTCATTCCTC 	42
-----------------------------------------------------------------------------------------CGGACCAGGCTTCATTCCT 	2
------------------------------------------------------------------------------------------GGACCAGGCTTCATTCCTC 	14

Overlaps with: MNEST041944 MNEST048851
Overlaps with miRBase pre-miRNAs: osa-MIR166h
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
47	Oryza sativa	GSM571077-22529	TCGGACCAGGCTTCATTCCCC	GGAATGTTGTCTGGTCCGAGA	down	2	0

Secondary structure

TTCATTTTTATGGCAGTTGAGGGGAATGTTGTCTGGTCCGAGACCTAACACCGGGCGGAATGGCGGATTCAGCTGCAGCTAAGCAAGCTAGGTGGGGGGTTTCGGACCAGGCTTCATTCCCCCCAACTCAACTGTTTAGTT
-----------------TGAGGGGAATGTTGTCTGGTC 	3
----------------------GGAATGTTGTCTGGTCCGAGA 	18
----------------------GGAATGTTGTCTGGTCCGA 	1
----------------------GGAATGTTGTCTGGTCCGAG 	1
-----------------------GAATGTTGTCTGGTCCGAGA 	4
-----------------------GAATGTTGTCTGGTCCGAGAC 	2
-------------------------ATGTTGTCTGGTCCGAGAC 	1
--------------------------------------------------------------------------------------------------GTTTCGGACCAGGCTTCATTC 	3
--------------------------------------------------------------------------------------------------GTTTCGGACCAGGCTTCATT 	1
---------------------------------------------------------------------------------------------------TTTCGGACCAGGCTTCATTCC 	16
---------------------------------------------------------------------------------------------------TTTCGGACCAGGCTTCATT 	1
---------------------------------------------------------------------------------------------------TTTCGGACCAGGCTTCATTC 	1
----------------------------------------------------------------------------------------------------TTCGGACCAGGCTTCATTCCC 	604
----------------------------------------------------------------------------------------------------TTCGGACCAGGCTTCATTCC 	9
----------------------------------------------------------------------------------------------------TTCGGACCAGGCTTCATTC 	8
----------------------------------------------------------------------------------------------------TTCGGACCAGGCTTCATTCCCC 	6
-----------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCC 	6268
-----------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCC 	145
-----------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCC 	278
-----------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCCCC 	1
-----------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCCC 	1
------------------------------------------------------------------------------------------------------CGGACCAGGCTTCATTCCCC 	173
------------------------------------------------------------------------------------------------------CGGACCAGGCTTCATTCCC 	2
-------------------------------------------------------------------------------------------------------GGACCAGGCTTCATTCCCC 	67

Overlaps with: MNEST041939 MNEST048846
Overlaps with miRBase pre-miRNAs: osa-MIR166c hvu-MIR166b
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
48	Oryza sativa	GSM686039-31370	TCGGACCAGGCTTCATTCCCC	GGAATGTTGTCTGGTTCAAGG	down	4	0

Secondary structure

GGGAAAGGAAAATAGATAGTATGAAGCTATTTGCTTCTGAGTGGAATGTTGTCTGGTTCAAGGTCTCATGCACCTTGCGGTTTTGAGGATGATTTGTGCAAGGTTTTTCATTCCTCTCATCCGTGGGATCTCGGACCAGGCTTCATTCCCCTCAGAGATAGCTTCAAAACATTAGATCTATAGTTCTCGC
------------------------------------------GGAATGTTGTCTGGTTCAAGGT 	1
------------------------------------------GGAATGTTGTCTGGTTCAAGG 	9
------------------------------------------GGAATGTTGTCTGGTTCAAG 	2
------------------------------------------GGAATGTTGTCTGGTTCAA 	1
-------------------------------------------GAATGTTGTCTGGTTCAAGG 	1
-------------------------------------------------------------------------------------------------------------------------------ATCTCGGACCAGGCTTCATTCCCC 	1
--------------------------------------------------------------------------------------------------------------------------------TCTCGGACCAGGCTTCATTCCCC 	1
--------------------------------------------------------------------------------------------------------------------------------TCTCGGACCAGGCTTCATTCC 	179
--------------------------------------------------------------------------------------------------------------------------------TCTCGGACCAGGCTTCATTC 	6
--------------------------------------------------------------------------------------------------------------------------------TCTCGGACCAGGCTTCATT 	1
---------------------------------------------------------------------------------------------------------------------------------CTCGGACCAGGCTTCATTCCCC 	15
---------------------------------------------------------------------------------------------------------------------------------CTCGGACCAGGCTTCATTCCC 	2
---------------------------------------------------------------------------------------------------------------------------------CTCGGACCAGGCTTCATTCC 	1
---------------------------------------------------------------------------------------------------------------------------------CTCGGACCAGGCTTCATTC 	1
----------------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCCT 	15
----------------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCC 	12295
----------------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCC 	169
----------------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCC 	219
-----------------------------------------------------------------------------------------------------------------------------------CGGACCAGGCTTCATTCCCCT 	1
-----------------------------------------------------------------------------------------------------------------------------------CGGACCAGGCTTCATTCCCC 	63
------------------------------------------------------------------------------------------------------------------------------------GGACCAGGCTTCATTCCCC 	664

Overlaps with: MNEST041937 MNEST048844
Overlaps with miRBase pre-miRNAs: osa-MIR166a
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
49	Oryza sativa	GSM686039-31370	TCGGACCAGGCTTCATTCCCC	GGAATGTCGTCTGGCCTGAGA	down	4	0

Secondary structure

CTCCATTAATTTCAGTTCTTCCCCTCGATCATCTTGTTGAGAGGAATGTCGTCTGGCCTGAGATCGTACCACAGTGGTGGGTACACGTGGACGGTCTCGGACCAGGCTTCATTCCCCTCAACAACTCGTCGGAGTAGAGGAAGAAGACGGACAGTG
----------------------------------------------------------------------------------------------TCTCGGACCAGGCTTCATTCCCC 	1
----------------------------------------------------------------------------------------------TCTCGGACCAGGCTTCATTCC 	179
----------------------------------------------------------------------------------------------TCTCGGACCAGGCTTCATTC 	6
----------------------------------------------------------------------------------------------TCTCGGACCAGGCTTCATT 	1
-----------------------------------------------------------------------------------------------CTCGGACCAGGCTTCATTCCCC 	15
-----------------------------------------------------------------------------------------------CTCGGACCAGGCTTCATTCCC 	2
-----------------------------------------------------------------------------------------------CTCGGACCAGGCTTCATTCC 	1
-----------------------------------------------------------------------------------------------CTCGGACCAGGCTTCATTC 	1
------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCCT 	15
------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCC 	12295
------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCC 	169
------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCC 	219
-------------------------------------------------------------------------------------------------CGGACCAGGCTTCATTCCCCT 	1
-------------------------------------------------------------------------------------------------CGGACCAGGCTTCATTCCCC 	63
--------------------------------------------------------------------------------------------------GGACCAGGCTTCATTCCCC 	664

Overlaps with: MNEST041942 MNEST048849
Overlaps with miRBase pre-miRNAs: osa-MIR166f
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
50	Oryza sativa	GSM686039-31370	TCGGACCAGGCTTCATTCC	AATGGAGGCTGATCCAAGA	down	3	0

Secondary structure

GGAAGGGAAGCATGGTGTCTGGAATGGAGGCTGATCCAAGATCATTGCTTGGTGCAAAATACTAGGGCATTGTTGTAAGTGCCATTAGTTCTTTTTTGTTTCCGAGTTTGTTATCGAGGATCTCGGACCAGGCTTCATTCCTCACACCGTGCTTCCCGTT
------------------------------------------------------------------------------------------------------------------------TCTCGGACCAGGCTTCATTCC 	179
------------------------------------------------------------------------------------------------------------------------TCTCGGACCAGGCTTCATTC 	6
------------------------------------------------------------------------------------------------------------------------TCTCGGACCAGGCTTCATT 	1
-------------------------------------------------------------------------------------------------------------------------CTCGGACCAGGCTTCATTCC 	1
-------------------------------------------------------------------------------------------------------------------------CTCGGACCAGGCTTCATTC 	1
--------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCTC 	53
--------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCT 	14
--------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCC 	219
----------------------------------------------------------------------------------------------------------------------------GGACCAGGCTTCATTCCTC 	3

Overlaps with: MNEST041943 MNEST048850
Overlaps with miRBase pre-miRNAs: osa-MIR166g
HuntMi prediction: true miRNA