miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: deep sequencing predictions



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selected mature miRNA sequence: TCGGACCAGGCTTCATTCCCC

selected species: Arabidopsis thaliana



52 records found  

Showing records 51 - 52

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#specieslibrarymiRNAmiRNA*armmismatchesbulges
51 Arabidopsis thaliana GSM277608 TCGGACCAGGCTTCATTCCCC GGAATGTTGTTTGGCTCGAGG down 4 0


Secondary structure

TCTTCTTATAGTGAAGCGATTTAGGGTTTAGAGGAATGTTGTTTGGCTCGAGGTCATGGAGAGTAATTCGTTAACCCAACTCAAAACTCTAAATGATTCTCGGACCAGGCTTCATTCCCCTCAACCTATTTTATCGCATTTTTCAGAAA
-------------------------------------------------------------------------------------------------TCTCGGACCAGGCTTCATTCC 	1
--------------------------------------------------------------------------------------------------CTCGGACCAGGCTTCATTCCCC 	11
--------------------------------------------------------------------------------------------------CTCGGACCAGGCTTCATTCCC 	4
---------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCCT 	37
---------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCC 	30094
----------------------------------------------------------------------------------------------------CGGACCAGGCTTCATTCCCC 	441
----------------------------------------------------------------------------------------------------CGGACCAGGCTTCATTCCCCT 	3
-----------------------------------------------------------------------------------------------------GGACCAGGCTTCATTCCCCT 	1
-----------------------------------------------------------------------------------------------------GGACCAGGCTTCATTCCCC 	258

Overlaps with: MNEST040038 MNEST046951
Overlaps with miRBase pre-miRNAs: ath-MIR166g
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
52 Arabidopsis thaliana GSM277608 TCGGACCAGGCTTCATTCCCC GGAATGTTGTCTGGCACGAGG down 4 0


Secondary structure

TTCCTTTTGAGGGGAATGTTGTCTGGCACGAGGCCCTTAACTTAGATCTATATTTGATTATATATATATGTCTCTTCTTTATTCATTAGTCTATACATGAATGATCATTTTACGGTTAATGACGTCGGACCAGGCTTCATTCCCCTCAATTATA
---------------------------------------------------------------------------------------------------------------------------GTCGGACCAGGCTTCATTCC 	1
---------------------------------------------------------------------------------------------------------------------------GTCGGACCAGGCTTCATTCCC 	2
---------------------------------------------------------------------------------------------------------------------------GTCGGACCAGGCTTCATTCCCC 	6
----------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCCT 	37
----------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCC 	30094
-----------------------------------------------------------------------------------------------------------------------------CGGACCAGGCTTCATTCCCC 	441
-----------------------------------------------------------------------------------------------------------------------------CGGACCAGGCTTCATTCCCCT 	3
------------------------------------------------------------------------------------------------------------------------------GGACCAGGCTTCATTCCCCT 	1
------------------------------------------------------------------------------------------------------------------------------GGACCAGGCTTCATTCCCC 	258

Overlaps with: MNEST040036 MNEST046949
Overlaps with miRBase pre-miRNAs: ath-MIR166e
HuntMi prediction: true miRNA