miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: deep sequencing predictions



Please select library, species and/or miRNA sequence.


selected mature miRNA sequence: TCGGACCAGGCTTCATTCCCC

selected species: Arabidopsis thaliana



52 records found  

Showing records 1 - 50

Go to page:
 1  2  

#specieslibrarymiRNAmiRNA*armmismatchesbulges
1 Arabidopsis thaliana GSM304282 TCGGACCAGGCTTCATTCCCC GGACTGTTGTCTGGCTCGAGG down 4 0


Secondary structure

TCTCTTTTGAGGGGACTGTTGTCTGGCTCGAGGACTCTGGCTCGCTCTATTCATGTTGGATCTCTTTCGATCTAACAATCGAATTGAACCTTCAGATTTCAGATTTGATTAGGGTTTTAGCGTCTTCGGACCAGGCTTCATTCCCCCCAATTGTT
-------TGAGGGGACTGTTGTCTGGCT 	1
----------------------------------------------------------------------------------------------------------------------------TTCGGACCAGGCTTCATTCCCC 	16
----------------------------------------------------------------------------------------------------------------------------TTCGGACCAGGCTTCATTCCC 	57
----------------------------------------------------------------------------------------------------------------------------TTCGGACCAGGCTTCATTCC 	6
-----------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCCC 	2
-----------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCC 	406
-----------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCC 	23
-----------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCC 	10
-------------------------------------------------------------------------------------------------------------------------------GGACCAGGCTTCATTCCCC 	2


Overlaps with: MNEST040032 MNEST046945
Overlaps with miRBase pre-miRNAs: ath-MIR166a
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
2 Arabidopsis thaliana GSM304282 TCGGACCAGGCTTCATTCCCC GGACTGTTGTCTGGCTCGAGG down 4 0


Secondary structure

TTTCTTTTGAGGGGACTGTTGTCTGGCTCGAGGACTCTTATTCTAATACAATCTCATTTGAATACATTCAGATCTGATGATTGATTAGGGTTTTAGTGTCGTCGGACCAGGCTTCATTCCCCCCAATTATC
-------TGAGGGGACTGTTGTCTGGCT 	1
-----------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCCC 	2
-----------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCC 	406
-----------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCC 	23
-----------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCC 	10
-------------------------------------------------------------------------------------------------------GGACCAGGCTTCATTCCCC 	2


Overlaps with: MNEST040033 MNEST046946
Overlaps with miRBase pre-miRNAs: ath-MIR166b
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
3 Arabidopsis thaliana GSM304282 TCGGACCAGGCTTCATTCCCC GGAATGTTGTTTGGCTCGAGG down 4 0


Secondary structure

TCTTCTTATAGTGAAGCGATTTAGGGTTTAGAGGAATGTTGTTTGGCTCGAGGTCATGGAGAGTAATTCGTTAACCCAACTCAAAACTCTAAATGATTCTCGGACCAGGCTTCATTCCCCTCAACCTATTTTATCGCATTTTTCAGAAA
---------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCCT 	1
---------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCC 	406
---------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCC 	23
---------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCC 	10
-----------------------------------------------------------------------------------------------------GGACCAGGCTTCATTCCCC 	2


Overlaps with: MNEST040038 MNEST046951
Overlaps with miRBase pre-miRNAs: ath-MIR166g
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
4 Arabidopsis thaliana GSM304282 TCGGACCAGGCTTCATTCCCC GGAATGTTGTCTGGCACGAGG down 4 0


Secondary structure

TTCCTTTTGAGGGGAATGTTGTCTGGCACGAGGCCCTTAACTTAGATCTATATTTGATTATATATATATGTCTCTTCTTTATTCATTAGTCTATACATGAATGATCATTTTACGGTTAATGACGTCGGACCAGGCTTCATTCCCCTCAATTATA
----------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCCT 	1
----------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCC 	406
----------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCC 	23
----------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCC 	10
------------------------------------------------------------------------------------------------------------------------------GGACCAGGCTTCATTCCCC 	2


Overlaps with: MNEST040036 MNEST046949
Overlaps with miRBase pre-miRNAs: ath-MIR166e
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
5 Arabidopsis thaliana GSM415786-5994 TCGGACCAGGCTTCATTCCCC GGACTGTTGTCTGGCTCGAGG down 4 0


Secondary structure

TCTCTTTTGAGGGGACTGTTGTCTGGCTCGAGGACTCTGGCTCGCTCTATTCATGTTGGATCTCTTTCGATCTAACAATCGAATTGAACCTTCAGATTTCAGATTTGATTAGGGTTTTAGCGTCTTCGGACCAGGCTTCATTCCCCCCAATTGTT
----------GGGGACTGTTGTCTGGCTCGAG 	1
----------GGGGACTGTTGTCTGGCTCGA 	1
------------GGACTGTTGTCTGGCTCGAGG 	1
-------------GACTGTTGTCTGGCTCGAGGACTC 	2
-------------GACTGTTGTCTGGCTCGAGGAC 	2
-------------GACTGTTGTCTGGCTCGAGGA 	16
-------------GACTGTTGTCTGGCTCGAGG 	10
--------------ACTGTTGTCTGGCTCGAGG 	1
--------------------------------------------------------------------------------------------------------------------------TCTTCGGACCAGGCTTCATT 	1
----------------------------------------------------------------------------------------------------------------------------TTCGGACCAGGCTTCATTCCCC 	36
----------------------------------------------------------------------------------------------------------------------------TTCGGACCAGGCTTCATTCCC 	120
----------------------------------------------------------------------------------------------------------------------------TTCGGACCAGGCTTCATTCC 	7
----------------------------------------------------------------------------------------------------------------------------TTCGGACCAGGCTTCATTC 	5
-----------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCCC 	3
-----------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCC 	1943
-----------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCC 	39
-----------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCC 	43
------------------------------------------------------------------------------------------------------------------------------CGGACCAGGCTTCATTCCCC 	3
-------------------------------------------------------------------------------------------------------------------------------GGACCAGGCTTCATTCCCC 	4


Overlaps with: MNEST040032 MNEST046945
Overlaps with miRBase pre-miRNAs: ath-MIR166a
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
6 Arabidopsis thaliana GSM415786-5994 TCGGACCAGGCTTCATTCCCC GGACTGTTGTCTGGCTCGAGG down 4 0


Secondary structure

TTTCTTTTGAGGGGACTGTTGTCTGGCTCGAGGACTCTTATTCTAATACAATCTCATTTGAATACATTCAGATCTGATGATTGATTAGGGTTTTAGTGTCGTCGGACCAGGCTTCATTCCCCCCAATTATC
----------GGGGACTGTTGTCTGGCTCGAG 	1
----------GGGGACTGTTGTCTGGCTCGA 	1
------------GGACTGTTGTCTGGCTCGAGG 	1
-------------GACTGTTGTCTGGCTCGAGGACTC 	2
-------------GACTGTTGTCTGGCTCGAGGAC 	2
-------------GACTGTTGTCTGGCTCGAGGA 	16
-------------GACTGTTGTCTGGCTCGAGG 	10
--------------ACTGTTGTCTGGCTCGAGG 	1
----------------------------------------------------------------------------------------------------GTCGGACCAGGCTTCATTCCC 	2
-----------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCCC 	3
-----------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCC 	1943
-----------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCC 	39
-----------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCC 	43
------------------------------------------------------------------------------------------------------CGGACCAGGCTTCATTCCCC 	3
-------------------------------------------------------------------------------------------------------GGACCAGGCTTCATTCCCC 	4


Overlaps with: MNEST040033 MNEST046946
Overlaps with miRBase pre-miRNAs: ath-MIR166b
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
7 Arabidopsis thaliana GSM415786-5994 TCGGACCAGGCTTCATTCCCC GGAATGTTGTTTGGCTCGAGG down 4 0


Secondary structure

TCTTCTTATAGTGAAGCGATTTAGGGTTTAGAGGAATGTTGTTTGGCTCGAGGTCATGGAGAGTAATTCGTTAACCCAACTCAAAACTCTAAATGATTCTCGGACCAGGCTTCATTCCCCTCAACCTATTTTATCGCATTTTTCAGAAA
--------------------------------------------------------------------------------------------------CTCGGACCAGGCTTCATTCCC 	1
---------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCCT 	2
---------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCC 	1943
---------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCC 	39
---------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCC 	43
----------------------------------------------------------------------------------------------------CGGACCAGGCTTCATTCCCC 	3
-----------------------------------------------------------------------------------------------------GGACCAGGCTTCATTCCCC 	4


Overlaps with: MNEST040038 MNEST046951
Overlaps with miRBase pre-miRNAs: ath-MIR166g
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
8 Arabidopsis thaliana GSM415786-5994 TCGGACCAGGCTTCATTCCCC GGAATGTTGTCTGGCACGAGG down 4 0


Secondary structure

TTCCTTTTGAGGGGAATGTTGTCTGGCACGAGGCCCTTAACTTAGATCTATATTTGATTATATATATATGTCTCTTCTTTATTCATTAGTCTATACATGAATGATCATTTTACGGTTAATGACGTCGGACCAGGCTTCATTCCCCTCAATTATA
----------GGGGAATGTTGTCTGGCACGA 	2
----------GGGGAATGTTGTCTGGCACG 	1
------------GGAATGTTGTCTGGCACGAGG 	21
---------------------------------------------------------------------------------------------------------------------------GTCGGACCAGGCTTCATTCCC 	2
----------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCCT 	2
----------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCC 	1943
----------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCC 	39
----------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCC 	43
-----------------------------------------------------------------------------------------------------------------------------CGGACCAGGCTTCATTCCCC 	3
------------------------------------------------------------------------------------------------------------------------------GGACCAGGCTTCATTCCCC 	4


Overlaps with: MNEST040036 MNEST046949
Overlaps with miRBase pre-miRNAs: ath-MIR166e
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
9 Arabidopsis thaliana GSM424847-4989 TCGGACCAGGCTTCATTCCCC GGACTGTTGTCTGGCTCGAGG down 4 0


Secondary structure

TCTCTTTTGAGGGGACTGTTGTCTGGCTCGAGGACTCTGGCTCGCTCTATTCATGTTGGATCTCTTTCGATCTAACAATCGAATTGAACCTTCAGATTTCAGATTTGATTAGGGTTTTAGCGTCTTCGGACCAGGCTTCATTCCCCCCAATTGTT
------------GGACTGTTGTCTGGCTCGAGGACT 	1
------------GGACTGTTGTCTGGCTCGAGGA 	3
------------GGACTGTTGTCTGGCTCGAGG 	19
-------------GACTGTTGTCTGGCTCGAGGA 	7
-------------GACTGTTGTCTGGCTCGAGG 	2
--------------------------------------------------------------------------------------------------------------------------TCTTCGGACCAGGCTTCATTCCCC 	4
---------------------------------------------------------------------------------------------------------------------------CTTCGGACCAGGCTTCATTCCCC 	8
---------------------------------------------------------------------------------------------------------------------------CTTCGGACCAGGCTTCATTCCC 	1
----------------------------------------------------------------------------------------------------------------------------TTCGGACCAGGCTTCATTCCCCCC 	1
----------------------------------------------------------------------------------------------------------------------------TTCGGACCAGGCTTCATTCCCCC 	3
----------------------------------------------------------------------------------------------------------------------------TTCGGACCAGGCTTCATTCCCC 	2646
----------------------------------------------------------------------------------------------------------------------------TTCGGACCAGGCTTCATTCCC 	1147
----------------------------------------------------------------------------------------------------------------------------TTCGGACCAGGCTTCATTCC 	44
-----------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCCCC 	1
-----------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCCC 	131
-----------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCC 	79589
-----------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCC 	529
------------------------------------------------------------------------------------------------------------------------------CGGACCAGGCTTCATTCCCC 	17
------------------------------------------------------------------------------------------------------------------------------CGGACCAGGCTTCATTCCC 	3
-------------------------------------------------------------------------------------------------------------------------------GGACCAGGCTTCATTCCCCC 	2
-------------------------------------------------------------------------------------------------------------------------------GGACCAGGCTTCATTCCCC 	429


Overlaps with: MNEST040032 MNEST046945
Overlaps with miRBase pre-miRNAs: ath-MIR166a
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
10 Arabidopsis thaliana GSM424847-4989 TCGGACCAGGCTTCATTCCCC GGACTGTTGTCTGGCTCGAGG down 4 0


Secondary structure

TTTCTTTTGAGGGGACTGTTGTCTGGCTCGAGGACTCTTATTCTAATACAATCTCATTTGAATACATTCAGATCTGATGATTGATTAGGGTTTTAGTGTCGTCGGACCAGGCTTCATTCCCCCCAATTATC
------------GGACTGTTGTCTGGCTCGAGGACT 	1
------------GGACTGTTGTCTGGCTCGAGGA 	3
------------GGACTGTTGTCTGGCTCGAGG 	19
-------------GACTGTTGTCTGGCTCGAGGA 	7
-------------GACTGTTGTCTGGCTCGAGG 	2
-------------------------------------------------------------------------------------------------GTCGTCGGACCAGGCTTCATTCC 	1
---------------------------------------------------------------------------------------------------CGTCGGACCAGGCTTCATTCCCC 	2
----------------------------------------------------------------------------------------------------GTCGGACCAGGCTTCATTCCCC 	6
----------------------------------------------------------------------------------------------------GTCGGACCAGGCTTCATTCCC 	10
-----------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCCCC 	1
-----------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCCC 	131
-----------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCC 	79589
-----------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCC 	529
------------------------------------------------------------------------------------------------------CGGACCAGGCTTCATTCCCC 	17
------------------------------------------------------------------------------------------------------CGGACCAGGCTTCATTCCC 	3
-------------------------------------------------------------------------------------------------------GGACCAGGCTTCATTCCCCC 	2
-------------------------------------------------------------------------------------------------------GGACCAGGCTTCATTCCCC 	429


Overlaps with: MNEST040033 MNEST046946
Overlaps with miRBase pre-miRNAs: ath-MIR166b
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
11 Arabidopsis thaliana GSM424847-4989 TCGGACCAGGCTTCATTCCCC GGAATGTTGTTTGGCTCGAGG down 4 0


Secondary structure

TCTTCTTATAGTGAAGCGATTTAGGGTTTAGAGGAATGTTGTTTGGCTCGAGGTCATGGAGAGTAATTCGTTAACCCAACTCAAAACTCTAAATGATTCTCGGACCAGGCTTCATTCCCCTCAACCTATTTTATCGCATTTTTCAGAAA
-------------------------------------------------------------------------------------------------TCTCGGACCAGGCTTCATTCCCC 	1
--------------------------------------------------------------------------------------------------CTCGGACCAGGCTTCATTCCCC 	46
--------------------------------------------------------------------------------------------------CTCGGACCAGGCTTCATTCCC 	4
---------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCCTC 	2
---------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCCT 	161
---------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCC 	79589
---------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCC 	529
----------------------------------------------------------------------------------------------------CGGACCAGGCTTCATTCCCCT 	3
----------------------------------------------------------------------------------------------------CGGACCAGGCTTCATTCCCC 	17
----------------------------------------------------------------------------------------------------CGGACCAGGCTTCATTCCC 	3
-----------------------------------------------------------------------------------------------------GGACCAGGCTTCATTCCCCT 	1
-----------------------------------------------------------------------------------------------------GGACCAGGCTTCATTCCCC 	429


Overlaps with: MNEST040038 MNEST046951
Overlaps with miRBase pre-miRNAs: ath-MIR166g
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
12 Arabidopsis thaliana GSM424847-4989 TCGGACCAGGCTTCATTCCCC GGAATGTTGTCTGGCACGAGG down 4 0


Secondary structure

TTCCTTTTGAGGGGAATGTTGTCTGGCACGAGGCCCTTAACTTAGATCTATATTTGATTATATATATATGTCTCTTCTTTATTCATTAGTCTATACATGAATGATCATTTTACGGTTAATGACGTCGGACCAGGCTTCATTCCCCTCAATTATA
----------GGGGAATGTTGTCTGGCACGA 	1
------------GGAATGTTGTCTGGCACGAGG 	29
-------------GAATGTTGTCTGGCACGAGGC 	1
------------------------------------------------------------------------------------------------------------------------GACGTCGGACCAGGCTTCATTCCC 	1
--------------------------------------------------------------------------------------------------------------------------CGTCGGACCAGGCTTCATTCCCC 	2
---------------------------------------------------------------------------------------------------------------------------GTCGGACCAGGCTTCATTCCCCT 	1
---------------------------------------------------------------------------------------------------------------------------GTCGGACCAGGCTTCATTCCCC 	6
---------------------------------------------------------------------------------------------------------------------------GTCGGACCAGGCTTCATTCCC 	10
----------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCCTC 	2
----------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCCT 	161
----------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCC 	79589
----------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCC 	529
-----------------------------------------------------------------------------------------------------------------------------CGGACCAGGCTTCATTCCCCT 	3
-----------------------------------------------------------------------------------------------------------------------------CGGACCAGGCTTCATTCCCC 	17
-----------------------------------------------------------------------------------------------------------------------------CGGACCAGGCTTCATTCCC 	3
------------------------------------------------------------------------------------------------------------------------------GGACCAGGCTTCATTCCCCT 	1
------------------------------------------------------------------------------------------------------------------------------GGACCAGGCTTCATTCCCC 	429


Overlaps with: MNEST040036 MNEST046949
Overlaps with miRBase pre-miRNAs: ath-MIR166e
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
13 Arabidopsis thaliana GSM415785 TCGGACCAGGCTTCATTCCCC GGACTGTTGTCTGGCTCGAGG down 4 0


Secondary structure

TCTCTTTTGAGGGGACTGTTGTCTGGCTCGAGGACTCTGGCTCGCTCTATTCATGTTGGATCTCTTTCGATCTAACAATCGAATTGAACCTTCAGATTTCAGATTTGATTAGGGTTTTAGCGTCTTCGGACCAGGCTTCATTCCCCCCAATTGTT
------------GGACTGTTGTCTGGCTCGAGGA 	1
-------------GACTGTTGTCTGGCTCGAGGAC 	1
---------------------------------------------------------------------------------------------------------------------------CTTCGGACCAGGCTTCATTCCCC 	1
---------------------------------------------------------------------------------------------------------------------------CTTCGGACCAGGCTTCATTCCC 	1
----------------------------------------------------------------------------------------------------------------------------TTCGGACCAGGCTTCATTCCCC 	175
----------------------------------------------------------------------------------------------------------------------------TTCGGACCAGGCTTCATTCCC 	253
----------------------------------------------------------------------------------------------------------------------------TTCGGACCAGGCTTCATTCC 	7
-----------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCCC 	7
-----------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCC 	7765
-----------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCC 	97
-----------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCC 	56
------------------------------------------------------------------------------------------------------------------------------CGGACCAGGCTTCATTCCCC 	30
-------------------------------------------------------------------------------------------------------------------------------GGACCAGGCTTCATTCCCC 	12


Overlaps with: MNEST040032 MNEST046945
Overlaps with miRBase pre-miRNAs: ath-MIR166a
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
14 Arabidopsis thaliana GSM415785 TCGGACCAGGCTTCATTCCCC GGACTGTTGTCTGGCTCGAGG down 4 0


Secondary structure

TTTCTTTTGAGGGGACTGTTGTCTGGCTCGAGGACTCTTATTCTAATACAATCTCATTTGAATACATTCAGATCTGATGATTGATTAGGGTTTTAGTGTCGTCGGACCAGGCTTCATTCCCCCCAATTATC
------------GGACTGTTGTCTGGCTCGAGGA 	1
-------------GACTGTTGTCTGGCTCGAGGAC 	1
-----------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCCC 	7
-----------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCC 	7765
-----------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCC 	97
-----------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCC 	56
------------------------------------------------------------------------------------------------------CGGACCAGGCTTCATTCCCC 	30
-------------------------------------------------------------------------------------------------------GGACCAGGCTTCATTCCCC 	12


Overlaps with: MNEST040033 MNEST046946
Overlaps with miRBase pre-miRNAs: ath-MIR166b
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
15 Arabidopsis thaliana GSM415785 TCGGACCAGGCTTCATTCCCC GGAATGTTGTTTGGCTCGAGG down 4 0


Secondary structure

TCTTCTTATAGTGAAGCGATTTAGGGTTTAGAGGAATGTTGTTTGGCTCGAGGTCATGGAGAGTAATTCGTTAACCCAACTCAAAACTCTAAATGATTCTCGGACCAGGCTTCATTCCCCTCAACCTATTTTATCGCATTTTTCAGAAA
--------------------------------------------------------------------------------------------------CTCGGACCAGGCTTCATTCCCCT 	1
--------------------------------------------------------------------------------------------------CTCGGACCAGGCTTCATTCCCC 	1
---------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCCT 	750
---------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCC 	7765
---------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCC 	97
---------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCC 	56
----------------------------------------------------------------------------------------------------CGGACCAGGCTTCATTCCCCT 	5
----------------------------------------------------------------------------------------------------CGGACCAGGCTTCATTCCCC 	30
-----------------------------------------------------------------------------------------------------GGACCAGGCTTCATTCCCCT 	2
-----------------------------------------------------------------------------------------------------GGACCAGGCTTCATTCCCC 	12


Overlaps with: MNEST040038 MNEST046951
Overlaps with miRBase pre-miRNAs: ath-MIR166g
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
16 Arabidopsis thaliana GSM415785 TCGGACCAGGCTTCATTCCCC GGAATGTTGTCTGGCACGAGG down 4 0


Secondary structure

TTCCTTTTGAGGGGAATGTTGTCTGGCACGAGGCCCTTAACTTAGATCTATATTTGATTATATATATATGTCTCTTCTTTATTCATTAGTCTATACATGAATGATCATTTTACGGTTAATGACGTCGGACCAGGCTTCATTCCCCTCAATTATA
----------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCCT 	750
----------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCC 	7765
----------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCC 	97
----------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCC 	56
-----------------------------------------------------------------------------------------------------------------------------CGGACCAGGCTTCATTCCCCT 	5
-----------------------------------------------------------------------------------------------------------------------------CGGACCAGGCTTCATTCCCC 	30
------------------------------------------------------------------------------------------------------------------------------GGACCAGGCTTCATTCCCCT 	2
------------------------------------------------------------------------------------------------------------------------------GGACCAGGCTTCATTCCCC 	12


Overlaps with: MNEST040036 MNEST046949
Overlaps with miRBase pre-miRNAs: ath-MIR166e
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
17 Arabidopsis thaliana GSM366870 TCGGACCAGGCTTCATTCCCC GGACTGTTGTCTGGCTCGAGG down 4 0


Secondary structure

TCTCTTTTGAGGGGACTGTTGTCTGGCTCGAGGACTCTGGCTCGCTCTATTCATGTTGGATCTCTTTCGATCTAACAATCGAATTGAACCTTCAGATTTCAGATTTGATTAGGGTTTTAGCGTCTTCGGACCAGGCTTCATTCCCCCCAATTGTT
--------GAGGGGACTGTTGTCTGGCTC 	1
---------AGGGGACTGTTGTCTGGCTC 	2
----------GGGGACTGTTGTCTGGCTCGA 	1
-----------GGGACTGTTGTCTGGCTCGAG 	1
------------GGACTGTTGTCTGGCTCGAGG 	3
------------GGACTGTTGTCTGGCTCGAGGA 	3
-------------GACTGTTGTCTGGCTCGAGGA 	1
----------------------------------------------------------------------------------------------------------GATTAGGGTTTTAGCGTCT 	1
----------------------------------------------------------------------------------------------------------------------------TTCGGACCAGGCTTCATTCCCC 	16
----------------------------------------------------------------------------------------------------------------------------TTCGGACCAGGCTTCATTCCC 	34
----------------------------------------------------------------------------------------------------------------------------TTCGGACCAGGCTTCATTCC 	1
-----------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCC 	516
-----------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCC 	6
-----------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCC 	6
-------------------------------------------------------------------------------------------------------------------------------GGACCAGGCTTCATTCCCC 	4


Overlaps with: MNEST040032 MNEST046945
Overlaps with miRBase pre-miRNAs: ath-MIR166a
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
18 Arabidopsis thaliana GSM366870 TCGGACCAGGCTTCATTCCCC GGACTGTTGTCTGGCTCGAGG down 4 0


Secondary structure

TTTCTTTTGAGGGGACTGTTGTCTGGCTCGAGGACTCTTATTCTAATACAATCTCATTTGAATACATTCAGATCTGATGATTGATTAGGGTTTTAGTGTCGTCGGACCAGGCTTCATTCCCCCCAATTATC
--------GAGGGGACTGTTGTCTGGCTC 	1
---------AGGGGACTGTTGTCTGGCTC 	2
----------GGGGACTGTTGTCTGGCTCGA 	1
-----------GGGACTGTTGTCTGGCTCGAG 	1
------------GGACTGTTGTCTGGCTCGAGG 	3
------------GGACTGTTGTCTGGCTCGAGGA 	3
-------------GACTGTTGTCTGGCTCGAGGA 	1
----------------------------------------------------------------------------------------------------GTCGGACCAGGCTTCATTCCC 	1
-----------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCC 	516
-----------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCC 	6
-----------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCC 	6
-------------------------------------------------------------------------------------------------------GGACCAGGCTTCATTCCCC 	4


Overlaps with: MNEST040033 MNEST046946
Overlaps with miRBase pre-miRNAs: ath-MIR166b
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
19 Arabidopsis thaliana GSM366870 TCGGACCAGGCTTCATTCCCC GGAATGTTGTTTGGCTCGAGG down 4 0


Secondary structure

TCTTCTTATAGTGAAGCGATTTAGGGTTTAGAGGAATGTTGTTTGGCTCGAGGTCATGGAGAGTAATTCGTTAACCCAACTCAAAACTCTAAATGATTCTCGGACCAGGCTTCATTCCCCTCAACCTATTTTATCGCATTTTTCAGAAA
---------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCC 	516
---------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCC 	6
---------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCC 	6
-----------------------------------------------------------------------------------------------------GGACCAGGCTTCATTCCCC 	4


Overlaps with: MNEST040038 MNEST046951
Overlaps with miRBase pre-miRNAs: ath-MIR166g
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
20 Arabidopsis thaliana GSM366870 TCGGACCAGGCTTCATTCCCC GGAATGTTGTCTGGCACGAGG down 4 0


Secondary structure

TTCCTTTTGAGGGGAATGTTGTCTGGCACGAGGCCCTTAACTTAGATCTATATTTGATTATATATATATGTCTCTTCTTTATTCATTAGTCTATACATGAATGATCATTTTACGGTTAATGACGTCGGACCAGGCTTCATTCCCCTCAATTATA
----------GGGGAATGTTGTCTGGCACG 	2
------------GGAATGTTGTCTGGCACGAGG 	1
------------GGAATGTTGTCTGGCACGAGGCCCT 	1
---------------------------------------------------------------------------------------------------------------------------GTCGGACCAGGCTTCATTCCC 	1
----------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCC 	516
----------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCC 	6
----------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCC 	6
------------------------------------------------------------------------------------------------------------------------------GGACCAGGCTTCATTCCCC 	4


Overlaps with: MNEST040036 MNEST046949
Overlaps with miRBase pre-miRNAs: ath-MIR166e
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
21 Arabidopsis thaliana GSM366869 TCGGACCAGGCTTCATTCCCC GGACTGTTGTCTGGCTCGAGG down 4 0


Secondary structure

TCTCTTTTGAGGGGACTGTTGTCTGGCTCGAGGACTCTGGCTCGCTCTATTCATGTTGGATCTCTTTCGATCTAACAATCGAATTGAACCTTCAGATTTCAGATTTGATTAGGGTTTTAGCGTCTTCGGACCAGGCTTCATTCCCCCCAATTGTT
----------------------------------------------------------------------------------------------------------------------------TTCGGACCAGGCTTCATTCCCC 	1
-----------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCC 	78
-----------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCC 	1
-----------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCC 	3


Overlaps with: MNEST040032 MNEST046945
Overlaps with miRBase pre-miRNAs: ath-MIR166a
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
22 Arabidopsis thaliana GSM366869 TCGGACCAGGCTTCATTCCCC GGACTGTTGTCTGGCTCGAGG down 4 0


Secondary structure

TTTCTTTTGAGGGGACTGTTGTCTGGCTCGAGGACTCTTATTCTAATACAATCTCATTTGAATACATTCAGATCTGATGATTGATTAGGGTTTTAGTGTCGTCGGACCAGGCTTCATTCCCCCCAATTATC
-----------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCC 	78
-----------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCC 	1
-----------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCC 	3


Overlaps with: MNEST040033 MNEST046946
Overlaps with miRBase pre-miRNAs: ath-MIR166b
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
23 Arabidopsis thaliana GSM366869 TCGGACCAGGCTTCATTCCCC GGAATGTTGTTTGGCTCGAGG down 4 0


Secondary structure

TCTTCTTATAGTGAAGCGATTTAGGGTTTAGAGGAATGTTGTTTGGCTCGAGGTCATGGAGAGTAATTCGTTAACCCAACTCAAAACTCTAAATGATTCTCGGACCAGGCTTCATTCCCCTCAACCTATTTTATCGCATTTTTCAGAAA
---------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCC 	78
---------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCC 	1
---------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCC 	3


Overlaps with: MNEST040038 MNEST046951
Overlaps with miRBase pre-miRNAs: ath-MIR166g
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
24 Arabidopsis thaliana GSM366869 TCGGACCAGGCTTCATTCCCC GGAATGTTGTCTGGCACGAGG down 4 0


Secondary structure

TTCCTTTTGAGGGGAATGTTGTCTGGCACGAGGCCCTTAACTTAGATCTATATTTGATTATATATATATGTCTCTTCTTTATTCATTAGTCTATACATGAATGATCATTTTACGGTTAATGACGTCGGACCAGGCTTCATTCCCCTCAATTATA
----------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCC 	78
----------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCC 	1
----------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCC 	3


Overlaps with: MNEST040036 MNEST046949
Overlaps with miRBase pre-miRNAs: ath-MIR166e
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
25 Arabidopsis thaliana GSM304284 TCGGACCAGGCTTCATTCCCC GGACTGTTGTCTGGCTCGAGG down 4 0


Secondary structure

TCTCTTTTGAGGGGACTGTTGTCTGGCTCGAGGACTCTGGCTCGCTCTATTCATGTTGGATCTCTTTCGATCTAACAATCGAATTGAACCTTCAGATTTCAGATTTGATTAGGGTTTTAGCGTCTTCGGACCAGGCTTCATTCCCCCCAATTGTT
---------AGGGGACTGTTGTCTGGCTC 	1
-------------GACTGTTGTCTGGCTCGAGGA 	1
----------------------------------------------------------------------------------------------------------------------------TTCGGACCAGGCTTCATTCCCC 	2
----------------------------------------------------------------------------------------------------------------------------TTCGGACCAGGCTTCATTCCC 	17
----------------------------------------------------------------------------------------------------------------------------TTCGGACCAGGCTTCATTCC 	2
-----------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCCC 	2
-----------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCC 	185
-----------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCC 	21
-----------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCC 	10
-------------------------------------------------------------------------------------------------------------------------------GGACCAGGCTTCATTCCCC 	2


Overlaps with: MNEST040032 MNEST046945
Overlaps with miRBase pre-miRNAs: ath-MIR166a
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
26 Arabidopsis thaliana GSM304284 TCGGACCAGGCTTCATTCCCC GGACTGTTGTCTGGCTCGAGG down 4 0


Secondary structure

TTTCTTTTGAGGGGACTGTTGTCTGGCTCGAGGACTCTTATTCTAATACAATCTCATTTGAATACATTCAGATCTGATGATTGATTAGGGTTTTAGTGTCGTCGGACCAGGCTTCATTCCCCCCAATTATC
---------AGGGGACTGTTGTCTGGCTC 	1
-------------GACTGTTGTCTGGCTCGAGGA 	1
-----------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCCC 	2
-----------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCC 	185
-----------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCC 	21
-----------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCC 	10
-------------------------------------------------------------------------------------------------------GGACCAGGCTTCATTCCCC 	2


Overlaps with: MNEST040033 MNEST046946
Overlaps with miRBase pre-miRNAs: ath-MIR166b
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
27 Arabidopsis thaliana GSM304284 TCGGACCAGGCTTCATTCCCC GGAATGTTGTTTGGCTCGAGG down 4 0


Secondary structure

TCTTCTTATAGTGAAGCGATTTAGGGTTTAGAGGAATGTTGTTTGGCTCGAGGTCATGGAGAGTAATTCGTTAACCCAACTCAAAACTCTAAATGATTCTCGGACCAGGCTTCATTCCCCTCAACCTATTTTATCGCATTTTTCAGAAA
-------------------------------------------------------------------------------------------------TCTCGGACCAGGCTTCATTCC 	1
--------------------------------------------------------------------------------------------------CTCGGACCAGGCTTCATTCCC 	1
---------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCCT 	2
---------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCC 	185
---------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCC 	21
---------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCC 	10
-----------------------------------------------------------------------------------------------------GGACCAGGCTTCATTCCCC 	2


Overlaps with: MNEST040038 MNEST046951
Overlaps with miRBase pre-miRNAs: ath-MIR166g
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
28 Arabidopsis thaliana GSM304284 TCGGACCAGGCTTCATTCCCC GGAATGTTGTCTGGCACGAGG down 4 0


Secondary structure

TTCCTTTTGAGGGGAATGTTGTCTGGCACGAGGCCCTTAACTTAGATCTATATTTGATTATATATATATGTCTCTTCTTTATTCATTAGTCTATACATGAATGATCATTTTACGGTTAATGACGTCGGACCAGGCTTCATTCCCCTCAATTATA
-------------GAATGTTGTCTGGCACGAGGC 	1
----------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCCT 	2
----------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCC 	185
----------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCC 	21
----------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCC 	10
------------------------------------------------------------------------------------------------------------------------------GGACCAGGCTTCATTCCCC 	2


Overlaps with: MNEST040036 MNEST046949
Overlaps with miRBase pre-miRNAs: ath-MIR166e
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
29 Arabidopsis thaliana GSM366866 TCGGACCAGGCTTCATTCCCC GGACTGTTGTCTGGCTCGAGG down 4 0


Secondary structure

TCTCTTTTGAGGGGACTGTTGTCTGGCTCGAGGACTCTGGCTCGCTCTATTCATGTTGGATCTCTTTCGATCTAACAATCGAATTGAACCTTCAGATTTCAGATTTGATTAGGGTTTTAGCGTCTTCGGACCAGGCTTCATTCCCCCCAATTGTT
-------TGAGGGGACTGTTGTCTGGCT 	2
----------GGGGACTGTTGTCTGGCTCGA 	5
-----------GGGACTGTTGTCTGGCTCGAG 	1
------------GGACTGTTGTCTGGCTCGAGG 	11
------------GGACTGTTGTCTGGCTCGAGGA 	3
-------------GACTGTTGTCTGGCTCGAGGACTC 	1
-------------GACTGTTGTCTGGCTCGAGGA 	1
--------------ACTGTTGTCTGGCTCGAGG 	1
--------------------------------------------------------------------------------------------------------TTGATTAGGGTTTTAGCGTCT 	1
----------------------------------------------------------------------------------------------------------------------------TTCGGACCAGGCTTCATTCCC 	87
----------------------------------------------------------------------------------------------------------------------------TTCGGACCAGGCTTCATTCCCC 	82
----------------------------------------------------------------------------------------------------------------------------TTCGGACCAGGCTTCATTCCCCC 	1
----------------------------------------------------------------------------------------------------------------------------TTCGGACCAGGCTTCATTCC 	4
----------------------------------------------------------------------------------------------------------------------------TTCGGACCAGGCTTCATTC 	4
-----------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCC 	6
-----------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCC 	911
-----------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCC 	9
-----------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCCC 	4
-------------------------------------------------------------------------------------------------------------------------------GGACCAGGCTTCATTCCCC 	13


Overlaps with: MNEST040032 MNEST046945
Overlaps with miRBase pre-miRNAs: ath-MIR166a
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
30 Arabidopsis thaliana GSM366866 TCGGACCAGGCTTCATTCCCC GGACTGTTGTCTGGCTCGAGG down 4 0


Secondary structure

TTTCTTTTGAGGGGACTGTTGTCTGGCTCGAGGACTCTTATTCTAATACAATCTCATTTGAATACATTCAGATCTGATGATTGATTAGGGTTTTAGTGTCGTCGGACCAGGCTTCATTCCCCCCAATTATC
-------TGAGGGGACTGTTGTCTGGCT 	2
----------GGGGACTGTTGTCTGGCTCGA 	5
-----------GGGACTGTTGTCTGGCTCGAG 	1
------------GGACTGTTGTCTGGCTCGAGG 	11
------------GGACTGTTGTCTGGCTCGAGGA 	3
-------------GACTGTTGTCTGGCTCGAGGACTC 	1
-------------GACTGTTGTCTGGCTCGAGGA 	1
--------------ACTGTTGTCTGGCTCGAGG 	1
-----------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCC 	6
-----------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCC 	911
-----------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCC 	9
-----------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCCC 	4
-------------------------------------------------------------------------------------------------------GGACCAGGCTTCATTCCCC 	13


Overlaps with: MNEST040033 MNEST046946
Overlaps with miRBase pre-miRNAs: ath-MIR166b
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
31 Arabidopsis thaliana GSM366866 TCGGACCAGGCTTCATTCCCC GGAATGTTGTTTGGCTCGAGG down 4 0


Secondary structure

TCTTCTTATAGTGAAGCGATTTAGGGTTTAGAGGAATGTTGTTTGGCTCGAGGTCATGGAGAGTAATTCGTTAACCCAACTCAAAACTCTAAATGATTCTCGGACCAGGCTTCATTCCCCTCAACCTATTTTATCGCATTTTTCAGAAA
--------------------------------------------------------------------------------------------------CTCGGACCAGGCTTCATTCCC 	1
---------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCCT 	3
---------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCC 	6
---------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCC 	911
---------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCC 	9
-----------------------------------------------------------------------------------------------------GGACCAGGCTTCATTCCCC 	13


Overlaps with: MNEST040038 MNEST046951
Overlaps with miRBase pre-miRNAs: ath-MIR166g
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
32 Arabidopsis thaliana GSM366866 TCGGACCAGGCTTCATTCCCC GGAATGTTGTCTGGCACGAGG down 4 0


Secondary structure

TTCCTTTTGAGGGGAATGTTGTCTGGCACGAGGCCCTTAACTTAGATCTATATTTGATTATATATATATGTCTCTTCTTTATTCATTAGTCTATACATGAATGATCATTTTACGGTTAATGACGTCGGACCAGGCTTCATTCCCCTCAATTATA
----------GGGGAATGTTGTCTGGCACG 	5
----------GGGGAATGTTGTCTGGCACGA 	2
------------GGAATGTTGTCTGGCACGAGG 	10
----------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCCT 	3
----------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCC 	6
----------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCC 	911
----------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCC 	9
------------------------------------------------------------------------------------------------------------------------------GGACCAGGCTTCATTCCCC 	13


Overlaps with: MNEST040036 MNEST046949
Overlaps with miRBase pre-miRNAs: ath-MIR166e
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
33 Arabidopsis thaliana GSM424848-4990 TCGGACCAGGCTTCATTCCCC GGACTGTTGTCTGGCTCGAGG down 4 0


Secondary structure

TCTCTTTTGAGGGGACTGTTGTCTGGCTCGAGGACTCTGGCTCGCTCTATTCATGTTGGATCTCTTTCGATCTAACAATCGAATTGAACCTTCAGATTTCAGATTTGATTAGGGTTTTAGCGTCTTCGGACCAGGCTTCATTCCCCCCAATTGTT
-----TTTGAGGGGACTGTTGTCTGGCT 	1
------------GGACTGTTGTCTGGCTCGAGG 	1
-------------GACTGTTGTCTGGCTCGAGGA 	5
-------------GACTGTTGTCTGGCTCGAGG 	1
--------------------------------------------------------------------------------------------------------------------------TCTTCGGACCAGGCTTCATTCCCC 	7
--------------------------------------------------------------------------------------------------------------------------TCTTCGGACCAGGCTTCATTCCC 	1
---------------------------------------------------------------------------------------------------------------------------CTTCGGACCAGGCTTCATTCCCC 	12
----------------------------------------------------------------------------------------------------------------------------TTCGGACCAGGCTTCATTCCCCC 	3
----------------------------------------------------------------------------------------------------------------------------TTCGGACCAGGCTTCATTCCCC 	2518
----------------------------------------------------------------------------------------------------------------------------TTCGGACCAGGCTTCATTCCC 	1320
----------------------------------------------------------------------------------------------------------------------------TTCGGACCAGGCTTCATTCC 	52
-----------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCCC 	74
-----------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCC 	84844
-----------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCC 	633
-----------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCC 	1
------------------------------------------------------------------------------------------------------------------------------CGGACCAGGCTTCATTCCCCC 	2
------------------------------------------------------------------------------------------------------------------------------CGGACCAGGCTTCATTCCCC 	21
------------------------------------------------------------------------------------------------------------------------------CGGACCAGGCTTCATTCCC 	2
-------------------------------------------------------------------------------------------------------------------------------GGACCAGGCTTCATTCCCCC 	1
-------------------------------------------------------------------------------------------------------------------------------GGACCAGGCTTCATTCCCC 	549


Overlaps with: MNEST040032 MNEST046945
Overlaps with miRBase pre-miRNAs: ath-MIR166a
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
34 Arabidopsis thaliana GSM424848-4990 TCGGACCAGGCTTCATTCCCC GGACTGTTGTCTGGCTCGAGG down 4 0


Secondary structure

TTTCTTTTGAGGGGACTGTTGTCTGGCTCGAGGACTCTTATTCTAATACAATCTCATTTGAATACATTCAGATCTGATGATTGATTAGGGTTTTAGTGTCGTCGGACCAGGCTTCATTCCCCCCAATTATC
-----TTTGAGGGGACTGTTGTCTGGCT 	1
------------GGACTGTTGTCTGGCTCGAGG 	1
-------------GACTGTTGTCTGGCTCGAGGA 	5
-------------GACTGTTGTCTGGCTCGAGG 	1
-------------------------------------------------------------------------------------------TTTAGTGTCGTCGGACCAGGCT 	2
----------------------------------------------------------------------------------------------------GTCGGACCAGGCTTCATTCCC 	4
-----------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCCC 	74
-----------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCC 	84844
-----------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCC 	633
-----------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCC 	1
------------------------------------------------------------------------------------------------------CGGACCAGGCTTCATTCCCCC 	2
------------------------------------------------------------------------------------------------------CGGACCAGGCTTCATTCCCC 	21
------------------------------------------------------------------------------------------------------CGGACCAGGCTTCATTCCC 	2
-------------------------------------------------------------------------------------------------------GGACCAGGCTTCATTCCCCC 	1
-------------------------------------------------------------------------------------------------------GGACCAGGCTTCATTCCCC 	549


Overlaps with: MNEST040033 MNEST046946
Overlaps with miRBase pre-miRNAs: ath-MIR166b
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
35 Arabidopsis thaliana GSM424848-4990 TCGGACCAGGCTTCATTCCCC GGAATGTTGTTTGGCTCGAGG down 4 0


Secondary structure

TCTTCTTATAGTGAAGCGATTTAGGGTTTAGAGGAATGTTGTTTGGCTCGAGGTCATGGAGAGTAATTCGTTAACCCAACTCAAAACTCTAAATGATTCTCGGACCAGGCTTCATTCCCCTCAACCTATTTTATCGCATTTTTCAGAAA
-------------------------------------------------------------------------------------------------TCTCGGACCAGGCTTCATTCCCC 	1
-------------------------------------------------------------------------------------------------TCTCGGACCAGGCTTCATTCC 	1
--------------------------------------------------------------------------------------------------CTCGGACCAGGCTTCATTCCCC 	37
--------------------------------------------------------------------------------------------------CTCGGACCAGGCTTCATTCCC 	2
---------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCCTC 	1
---------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCCT 	104
---------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCC 	84844
---------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCC 	633
---------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCC 	1
----------------------------------------------------------------------------------------------------CGGACCAGGCTTCATTCCCCT 	3
----------------------------------------------------------------------------------------------------CGGACCAGGCTTCATTCCCC 	21
----------------------------------------------------------------------------------------------------CGGACCAGGCTTCATTCCC 	2
-----------------------------------------------------------------------------------------------------GGACCAGGCTTCATTCCCC 	549


Overlaps with: MNEST040038 MNEST046951
Overlaps with miRBase pre-miRNAs: ath-MIR166g
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
36 Arabidopsis thaliana GSM424848-4990 TCGGACCAGGCTTCATTCCCC GGAATGTTGTCTGGCACGAGG down 4 0


Secondary structure

TTCCTTTTGAGGGGAATGTTGTCTGGCACGAGGCCCTTAACTTAGATCTATATTTGATTATATATATATGTCTCTTCTTTATTCATTAGTCTATACATGAATGATCATTTTACGGTTAATGACGTCGGACCAGGCTTCATTCCCCTCAATTATA
-------TGAGGGGAATGTTGTCTGGCA 	1
--------GAGGGGAATGTTGTCTGGCA 	1
------------GGAATGTTGTCTGGCACGAGG 	17
---------------------------------------------------------------------------------------------------------------------------GTCGGACCAGGCTTCATTCCC 	4
----------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCCTC 	1
----------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCCT 	104
----------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCC 	84844
----------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCC 	633
----------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCC 	1
-----------------------------------------------------------------------------------------------------------------------------CGGACCAGGCTTCATTCCCCT 	3
-----------------------------------------------------------------------------------------------------------------------------CGGACCAGGCTTCATTCCCC 	21
-----------------------------------------------------------------------------------------------------------------------------CGGACCAGGCTTCATTCCC 	2
------------------------------------------------------------------------------------------------------------------------------GGACCAGGCTTCATTCCCC 	549


Overlaps with: MNEST040036 MNEST046949
Overlaps with miRBase pre-miRNAs: ath-MIR166e
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
37 Arabidopsis thaliana GSM304283 TCGGACCAGGCTTCATTCCCC GGACTGTTGTCTGGCTCGAGG down 4 0


Secondary structure

TCTCTTTTGAGGGGACTGTTGTCTGGCTCGAGGACTCTGGCTCGCTCTATTCATGTTGGATCTCTTTCGATCTAACAATCGAATTGAACCTTCAGATTTCAGATTTGATTAGGGTTTTAGCGTCTTCGGACCAGGCTTCATTCCCCCCAATTGTT
-------------GACTGTTGTCTGGCTCGAGGA 	3
----------------------------------------------------------------------------------------------------------------------------TTCGGACCAGGCTTCATTCCCC 	6
----------------------------------------------------------------------------------------------------------------------------TTCGGACCAGGCTTCATTCCC 	3
----------------------------------------------------------------------------------------------------------------------------TTCGGACCAGGCTTCATTCC 	1
-----------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCC 	94
-----------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCC 	11
-----------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCC 	4


Overlaps with: MNEST040032 MNEST046945
Overlaps with miRBase pre-miRNAs: ath-MIR166a
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
38 Arabidopsis thaliana GSM304283 TCGGACCAGGCTTCATTCCCC GGACTGTTGTCTGGCTCGAGG down 4 0


Secondary structure

TTTCTTTTGAGGGGACTGTTGTCTGGCTCGAGGACTCTTATTCTAATACAATCTCATTTGAATACATTCAGATCTGATGATTGATTAGGGTTTTAGTGTCGTCGGACCAGGCTTCATTCCCCCCAATTATC
-------------GACTGTTGTCTGGCTCGAGGA 	3
----------------------------------------------------------------------------------------------------GTCGGACCAGGCTTCATTCC 	1
-----------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCC 	94
-----------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCC 	11
-----------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCC 	4


Overlaps with: MNEST040033 MNEST046946
Overlaps with miRBase pre-miRNAs: ath-MIR166b
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
39 Arabidopsis thaliana GSM304283 TCGGACCAGGCTTCATTCCCC GGAATGTTGTTTGGCTCGAGG down 4 0


Secondary structure

TCTTCTTATAGTGAAGCGATTTAGGGTTTAGAGGAATGTTGTTTGGCTCGAGGTCATGGAGAGTAATTCGTTAACCCAACTCAAAACTCTAAATGATTCTCGGACCAGGCTTCATTCCCCTCAACCTATTTTATCGCATTTTTCAGAAA
---------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCC 	94
---------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCC 	11
---------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCC 	4


Overlaps with: MNEST040038 MNEST046951
Overlaps with miRBase pre-miRNAs: ath-MIR166g
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
40 Arabidopsis thaliana GSM304283 TCGGACCAGGCTTCATTCCCC GGAATGTTGTCTGGCACGAGG down 4 0


Secondary structure

TTCCTTTTGAGGGGAATGTTGTCTGGCACGAGGCCCTTAACTTAGATCTATATTTGATTATATATATATGTCTCTTCTTTATTCATTAGTCTATACATGAATGATCATTTTACGGTTAATGACGTCGGACCAGGCTTCATTCCCCTCAATTATA
-----TTTGAGGGGAATGTTGTCTGG 	3
---------------------------------------------------------------------------------------------------------------------------GTCGGACCAGGCTTCATTCC 	1
----------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCC 	94
----------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCC 	11
----------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCC 	4


Overlaps with: MNEST040036 MNEST046949
Overlaps with miRBase pre-miRNAs: ath-MIR166e
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
41 Arabidopsis thaliana GSM304285 TCGGACCAGGCTTCATTCCCC GGACTGTTGTCTGGCTCGAGG down 4 0


Secondary structure

TCTCTTTTGAGGGGACTGTTGTCTGGCTCGAGGACTCTGGCTCGCTCTATTCATGTTGGATCTCTTTCGATCTAACAATCGAATTGAACCTTCAGATTTCAGATTTGATTAGGGTTTTAGCGTCTTCGGACCAGGCTTCATTCCCCCCAATTGTT
----------------------------------------------------------------------------------------------------------------------------TTCGGACCAGGCTTCATTCCCC 	7
----------------------------------------------------------------------------------------------------------------------------TTCGGACCAGGCTTCATTCCC 	13
----------------------------------------------------------------------------------------------------------------------------TTCGGACCAGGCTTCATTCC 	2
-----------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCC 	179
-----------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCC 	5
-----------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCC 	6


Overlaps with: MNEST040032 MNEST046945
Overlaps with miRBase pre-miRNAs: ath-MIR166a
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
42 Arabidopsis thaliana GSM304285 TCGGACCAGGCTTCATTCCCC GGACTGTTGTCTGGCTCGAGG down 4 0


Secondary structure

TTTCTTTTGAGGGGACTGTTGTCTGGCTCGAGGACTCTTATTCTAATACAATCTCATTTGAATACATTCAGATCTGATGATTGATTAGGGTTTTAGTGTCGTCGGACCAGGCTTCATTCCCCCCAATTATC
-----------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCC 	179
-----------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCC 	5
-----------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCC 	6


Overlaps with: MNEST040033 MNEST046946
Overlaps with miRBase pre-miRNAs: ath-MIR166b
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
43 Arabidopsis thaliana GSM304285 TCGGACCAGGCTTCATTCCCC GGAATGTTGTTTGGCTCGAGG down 4 0


Secondary structure

TCTTCTTATAGTGAAGCGATTTAGGGTTTAGAGGAATGTTGTTTGGCTCGAGGTCATGGAGAGTAATTCGTTAACCCAACTCAAAACTCTAAATGATTCTCGGACCAGGCTTCATTCCCCTCAACCTATTTTATCGCATTTTTCAGAAA
-------------------------------------------------------------------------------------------------TCTCGGACCAGGCTTCATTCC 	3
---------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCC 	179
---------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCC 	5
---------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCC 	6


Overlaps with: MNEST040038 MNEST046951
Overlaps with miRBase pre-miRNAs: ath-MIR166g
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
44 Arabidopsis thaliana GSM304285 TCGGACCAGGCTTCATTCCCC GGAATGTTGTCTGGCACGAGG down 4 0


Secondary structure

TTCCTTTTGAGGGGAATGTTGTCTGGCACGAGGCCCTTAACTTAGATCTATATTTGATTATATATATATGTCTCTTCTTTATTCATTAGTCTATACATGAATGATCATTTTACGGTTAATGACGTCGGACCAGGCTTCATTCCCCTCAATTATA
----------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCC 	179
----------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCC 	5
----------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCC 	6


Overlaps with: MNEST040036 MNEST046949
Overlaps with miRBase pre-miRNAs: ath-MIR166e
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
45 Arabidopsis thaliana GSM518432-13544 TCGGACCAGGCTTCATTCCCC GGACTGTTGTCTGGCTCGAGG down 4 0


Secondary structure

TCTCTTTTGAGGGGACTGTTGTCTGGCTCGAGGACTCTGGCTCGCTCTATTCATGTTGGATCTCTTTCGATCTAACAATCGAATTGAACCTTCAGATTTCAGATTTGATTAGGGTTTTAGCGTCTTCGGACCAGGCTTCATTCCCCCCAATTGTT
-----TTTGAGGGGACTGTTGTCT 	1
----------GGGGACTGTTGTCTGGCTCGA 	5
-----------GGGACTGTTGTCTGGCTCGAG 	2
------------GGACTGTTGTCTGGCTCGAGG 	2
-------------GACTGTTGTCTGGCTCGAGG 	1
-------------GACTGTTGTCTGGCTCGAGGACTC 	2
-------------GACTGTTGTCTGGCTCGAGGAC 	1
-------------GACTGTTGTCTGGCTCGAGGA 	1
--------------------------------------------------------------------------------------------------------------------------TCTTCGGACCAGGCTTCATTC 	2
----------------------------------------------------------------------------------------------------------------------------TTCGGACCAGGCTTCATTCCCCC 	2
----------------------------------------------------------------------------------------------------------------------------TTCGGACCAGGCTTCATTCC 	5
----------------------------------------------------------------------------------------------------------------------------TTCGGACCAGGCTTCATTCCC 	223
----------------------------------------------------------------------------------------------------------------------------TTCGGACCAGGCTTCATTCCCC 	89
-----------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCC 	84
-----------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCC 	5424
-----------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCCCCA 	1
-----------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCC 	106
-----------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCCC 	3
-------------------------------------------------------------------------------------------------------------------------------GGACCAGGCTTCATTCCCC 	34


Overlaps with: MNEST040032 MNEST046945
Overlaps with miRBase pre-miRNAs: ath-MIR166a
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
46 Arabidopsis thaliana GSM518432-13544 TCGGACCAGGCTTCATTCCCC GGACTGTTGTCTGGCTCGAGG down 4 0


Secondary structure

TTTCTTTTGAGGGGACTGTTGTCTGGCTCGAGGACTCTTATTCTAATACAATCTCATTTGAATACATTCAGATCTGATGATTGATTAGGGTTTTAGTGTCGTCGGACCAGGCTTCATTCCCCCCAATTATC
-TTCTTTTGAGGGGACTGTTGT 	1
-----TTTGAGGGGACTGTTGTCT 	1
----------GGGGACTGTTGTCTGGCTCGA 	5
-----------GGGACTGTTGTCTGGCTCGAG 	2
------------GGACTGTTGTCTGGCTCGAGG 	2
-------------GACTGTTGTCTGGCTCGAGG 	1
-------------GACTGTTGTCTGGCTCGAGGACTC 	2
-------------GACTGTTGTCTGGCTCGAGGAC 	1
-------------GACTGTTGTCTGGCTCGAGGA 	1
-----------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCC 	84
-----------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCC 	5424
-----------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCCCCA 	1
-----------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCC 	106
-----------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCCC 	3
-------------------------------------------------------------------------------------------------------GGACCAGGCTTCATTCCCC 	34


Overlaps with: MNEST040033 MNEST046946
Overlaps with miRBase pre-miRNAs: ath-MIR166b
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
47 Arabidopsis thaliana GSM518432-13544 TCGGACCAGGCTTCATTCCCC GGAATGTTGTTTGGCTCGAGG down 4 0


Secondary structure

TCTTCTTATAGTGAAGCGATTTAGGGTTTAGAGGAATGTTGTTTGGCTCGAGGTCATGGAGAGTAATTCGTTAACCCAACTCAAAACTCTAAATGATTCTCGGACCAGGCTTCATTCCCCTCAACCTATTTTATCGCATTTTTCAGAAA
--------------------------------GGAATGTTGTTTGGCTCGAGG 	1
--------------------------------------------------------------------------------------------------CTCGGACCAGGCTTCATTCCCC 	5
--------------------------------------------------------------------------------------------------CTCGGACCAGGCTTCATTCCC 	2
---------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCC 	84
---------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCC 	5424
---------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCCT 	13
---------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCC 	106
-----------------------------------------------------------------------------------------------------GGACCAGGCTTCATTCCCC 	34


Overlaps with: MNEST040038 MNEST046951
Overlaps with miRBase pre-miRNAs: ath-MIR166g
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
48 Arabidopsis thaliana GSM518432-13544 TCGGACCAGGCTTCATTCCCC GGAATGTTGTCTGGCACGAGG down 4 0


Secondary structure

TTCCTTTTGAGGGGAATGTTGTCTGGCACGAGGCCCTTAACTTAGATCTATATTTGATTATATATATATGTCTCTTCTTTATTCATTAGTCTATACATGAATGATCATTTTACGGTTAATGACGTCGGACCAGGCTTCATTCCCCTCAATTATA
----------GGGGAATGTTGTCTGGCACGA 	4
----------GGGGAATGTTGTCTGGCAC 	1
----------GGGGAATGTTGTCTGGCACG 	6
-----------GGGAATGTTGTCTGGCACGAGG 	1
------------GGAATGTTGTCTGGCACGA 	1
------------GGAATGTTGTCTGGCACGAGG 	25
-------------GAATGTTGTCTGGCACGAGGC 	2
-------------GAATGTTGTCTGGCACGAGG 	3
----------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCC 	84
----------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCC 	5424
----------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCCT 	13
----------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCC 	106
------------------------------------------------------------------------------------------------------------------------------GGACCAGGCTTCATTCCCC 	34


Overlaps with: MNEST040036 MNEST046949
Overlaps with miRBase pre-miRNAs: ath-MIR166e
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
49 Arabidopsis thaliana GSM277608 TCGGACCAGGCTTCATTCCCC GGACTGTTGTCTGGCTCGAGG down 4 0


Secondary structure

TCTCTTTTGAGGGGACTGTTGTCTGGCTCGAGGACTCTGGCTCGCTCTATTCATGTTGGATCTCTTTCGATCTAACAATCGAATTGAACCTTCAGATTTCAGATTTGATTAGGGTTTTAGCGTCTTCGGACCAGGCTTCATTCCCCCCAATTGTT
----------GGGGACTGTTGTCTGGCTCGA 	1
-----------GGGACTGTTGTCTGGCTCGAG 	1
------------GGACTGTTGTCTGGCTCGAGGA 	14
------------GGACTGTTGTCTGGCTCGAGGAC 	4
------------GGACTGTTGTCTGGCTCGAGG 	275
-------------GACTGTTGTCTGGCTCGAGG 	32
--------------ACTGTTGTCTGGCTCGAGG 	1
--------------------------------------------------------------------------------------------------------------------------TCTTCGGACCAGGCTTCATTCCCC 	1
---------------------------------------------------------------------------------------------------------------------------CTTCGGACCAGGCTTCATTCCCC 	1
----------------------------------------------------------------------------------------------------------------------------TTCGGACCAGGCTTCATTCC 	4
----------------------------------------------------------------------------------------------------------------------------TTCGGACCAGGCTTCATTCCC 	195
----------------------------------------------------------------------------------------------------------------------------TTCGGACCAGGCTTCATTCCCC 	353
----------------------------------------------------------------------------------------------------------------------------TTCGGACCAGGCTTCATTC 	2
----------------------------------------------------------------------------------------------------------------------------TTCGGACCAGGCTTCATTCCCCC 	2
-----------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCCC 	42
-----------------------------------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCC 	30094
------------------------------------------------------------------------------------------------------------------------------CGGACCAGGCTTCATTCCCC 	441
-------------------------------------------------------------------------------------------------------------------------------GGACCAGGCTTCATTCCCC 	258


Overlaps with: MNEST040032 MNEST046945
Overlaps with miRBase pre-miRNAs: ath-MIR166a
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
50 Arabidopsis thaliana GSM277608 TCGGACCAGGCTTCATTCCCC GGACTGTTGTCTGGCTCGAGG down 4 0


Secondary structure

TTTCTTTTGAGGGGACTGTTGTCTGGCTCGAGGACTCTTATTCTAATACAATCTCATTTGAATACATTCAGATCTGATGATTGATTAGGGTTTTAGTGTCGTCGGACCAGGCTTCATTCCCCCCAATTATC
----------GGGGACTGTTGTCTGGCTCGA 	1
-----------GGGACTGTTGTCTGGCTCGAG 	1
------------GGACTGTTGTCTGGCTCGAGGA 	14
------------GGACTGTTGTCTGGCTCGAGGAC 	4
------------GGACTGTTGTCTGGCTCGAGG 	275
-------------GACTGTTGTCTGGCTCGAGG 	32
--------------ACTGTTGTCTGGCTCGAGG 	1
----------------------------------------------------------------------------------------------------GTCGGACCAGGCTTCATTCC 	1
----------------------------------------------------------------------------------------------------GTCGGACCAGGCTTCATTCCC 	2
----------------------------------------------------------------------------------------------------GTCGGACCAGGCTTCATTCCCC 	6
-----------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCCC 	42
-----------------------------------------------------------------------------------------------------TCGGACCAGGCTTCATTCCCC 	30094
------------------------------------------------------------------------------------------------------CGGACCAGGCTTCATTCCCC 	441
-------------------------------------------------------------------------------------------------------GGACCAGGCTTCATTCCCC 	258


Overlaps with: MNEST040033 MNEST046946
Overlaps with miRBase pre-miRNAs: ath-MIR166b
HuntMi prediction: true miRNA