miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: deep sequencing predictions



Please select library, species and/or miRNA sequence.


selected mature miRNA sequence: TCGGCGTAACATGATGTGTGCG

selected species: Acyrthosiphon pisum



1 records found  

#specieslibrarymiRNAmiRNA*armmismatchesbulges
1 Acyrthosiphon pisum GSM502519_unique_quant TCGGCGTAACATGATGTGTGCG GACACACGTGTTATGCCGCAA up 2 1


Secondary structure

AGATGTAGCAGTCCGTCTCTTTCGGCGTAACATGATGTGTGCGCTGCATTTGCGAAGTCGGACACACGTGTTATGCCGCAAGAGATGGTCTAAGGAGCC
--------------------TTCGGCGTAACATGATGTGTGC 	1
---------------------TCGGCGTAACATGATGTGTGCG 	10
---------------------TCGGCGTAACATGATGTGTG 	1
----------------------------------------------------------CGGACACACGTGTTATGCCGCA 	1

Overlaps with: MNEST035120
Overlaps with miRBase pre-miRNAs: api-mir-3026
HuntMi prediction: true miRNA