miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: deep sequencing predictions



Please select library, species and/or miRNA sequence.


selected mature miRNA sequence: TCGGTGGGACTTTCGTCCGTTT

selected species: Drosophila melanogaster



21 records found  

#specieslibrarymiRNAmiRNA*armmismatchesbulges
1 Drosophila melanogaster GSM360257-14325 TCGGTGGGACTTTCGTCCGTTT CCGGATGATGGTTCACAACGACC down 3 1


Secondary structure

CCATGGTAATGGTACGGTGCGACCGGATGATGGTTCACAACGACCGTGTCATTTAAACGGGTCGGTGGGACTTTCGTCCGTTTGTAACGCCATTTGTCAACG
----------------------CCGGATGATGGTTCACAACGACC 	3
----------------------CCGGATGATGGTTCACAACGAC 	1
----------------------CCGGATGATGGTTCACAAC 	1
----------------------CCGGATGATGGTTCACAACG 	1
-------------------------------------------------------------TCGGTGGGACTTTCGTCCGTT 	10
-------------------------------------------------------------TCGGTGGGACTTTCGTCCGTTT 	81
--------------------------------------------------------------CGGTGGGACTTTCGTCCGTTT 	1


HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
2 Drosophila melanogaster GSM399107-16288 TCGGTGGGACTTTCGTCCGTTT CCGGATGATGGTTCACAACGACC down 3 1


Secondary structure

CCATGGTAATGGTACGGTGCGACCGGATGATGGTTCACAACGACCGTGTCATTTAAACGGGTCGGTGGGACTTTCGTCCGTTTGTAACGCCATTTGTCAACG
----------------------CCGGATGATGGTTCACAACGACC 	110
----------------------CCGGATGATGGTTCACAACGAC 	27
----------------------CCGGATGATGGTTCACAACG 	4
----------------------CCGGATGATGGTTCACAACGA 	33
------------------------------------------------------------GTCGGTGGGACTTTCGTCCG 	1
------------------------------------------------------------GTCGGTGGGACTTTCGTCCGTTT 	1
-------------------------------------------------------------TCGGTGGGACTTTCGTCCGT 	67
-------------------------------------------------------------TCGGTGGGACTTTCGTCCGTT 	877
-------------------------------------------------------------TCGGTGGGACTTTCGTCCG 	16
-------------------------------------------------------------TCGGTGGGACTTTCGTCCGTTT 	7393
--------------------------------------------------------------CGGTGGGACTTTCGTCCGTT 	7
--------------------------------------------------------------CGGTGGGACTTTCGTCCGTTT 	37


HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
3 Drosophila melanogaster GSM399106-16287 TCGGTGGGACTTTCGTCCGTTT CCGGATGATGGTTCACAACGACC down 3 1


Secondary structure

CCATGGTAATGGTACGGTGCGACCGGATGATGGTTCACAACGACCGTGTCATTTAAACGGGTCGGTGGGACTTTCGTCCGTTTGTAACGCCATTTGTCAACG
---------------------ACCGGATGATGGTTCACAACGACC 	1
----------------------CCGGATGATGGTTCACAACGA 	12
----------------------CCGGATGATGGTTCACAACGACC 	44
----------------------CCGGATGATGGTTCACAACGAC 	4
-------------------------------------------------------------TCGGTGGGACTTTCGTCCGTT 	347
-------------------------------------------------------------TCGGTGGGACTTTCGTCCG 	5
-------------------------------------------------------------TCGGTGGGACTTTCGTCCGT 	23
-------------------------------------------------------------TCGGTGGGACTTTCGTCCGTTT 	3293
--------------------------------------------------------------CGGTGGGACTTTCGTCCGTT 	5
--------------------------------------------------------------CGGTGGGACTTTCGTCCGTTT 	16


HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
4 Drosophila melanogaster GSM466487_wt_total TCGGTGGGACTTTCGTCCGTTT CCGGATGATGGTTCACAACGACC down 3 1


Secondary structure

CCATGGTAATGGTACGGTGCGACCGGATGATGGTTCACAACGACCGTGTCATTTAAACGGGTCGGTGGGACTTTCGTCCGTTTGTAACGCCATTTGTCAACG
----------------------CCGGATGATGGTTCACAACGA 	13
----------------------CCGGATGATGGTTCACAACGACC 	124
----------------------CCGGATGATGGTTCACAACGAC 	12
-----------------------CGGATGATGGTTCACAACGACCG 	1
-------------------------------------------------------------TCGGTGGGACTTTCGTCCG 	14
-------------------------------------------------------------TCGGTGGGACTTTCGTCCGTTTG 	6
-------------------------------------------------------------TCGGTGGGACTTTCGTCCGTT 	2184
-------------------------------------------------------------TCGGTGGGACTTTCGTCCGTTTGT 	1
-------------------------------------------------------------TCGGTGGGACTTTCGTCCGT 	189
-------------------------------------------------------------TCGGTGGGACTTTCGTCCGTTT 	12631
--------------------------------------------------------------CGGTGGGACTTTCGTCCGTTTG 	1
--------------------------------------------------------------CGGTGGGACTTTCGTCCGTTT 	83
--------------------------------------------------------------CGGTGGGACTTTCGTCCGT 	2
--------------------------------------------------------------CGGTGGGACTTTCGTCCGTT 	10
---------------------------------------------------------------GGTGGGACTTTCGTCCGTT 	12
---------------------------------------------------------------GGTGGGACTTTCGTCCGTTT 	58
----------------------------------------------------------------GTGGGACTTTCGTCCGTTT 	4


HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
5 Drosophila melanogaster GSM399105-16286 TCGGTGGGACTTTCGTCCGTTT CCGGATGATGGTTCACAACGACC down 3 1


Secondary structure

CCATGGTAATGGTACGGTGCGACCGGATGATGGTTCACAACGACCGTGTCATTTAAACGGGTCGGTGGGACTTTCGTCCGTTTGTAACGCCATTTGTCAACG
----------------------CCGGATGATGGTTCACAACGACC 	26
----------------------CCGGATGATGGTTCACAACGAC 	2
-------------------------------------------------------------TCGGTGGGACTTTCGTCCGT 	3
-------------------------------------------------------------TCGGTGGGACTTTCGTCCGTT 	67
-------------------------------------------------------------TCGGTGGGACTTTCGTCCG 	1
-------------------------------------------------------------TCGGTGGGACTTTCGTCCGTTT 	916
--------------------------------------------------------------CGGTGGGACTTTCGTCCGTTT 	3


HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
6 Drosophila melanogaster GSM360262-14327 TCGGTGGGACTTTCGTCCGTTT CCGGATGATGGTTCACAACGACC down 3 1


Secondary structure

CCATGGTAATGGTACGGTGCGACCGGATGATGGTTCACAACGACCGTGTCATTTAAACGGGTCGGTGGGACTTTCGTCCGTTTGTAACGCCATTTGTCAACG
---------------------ACCGGATGATGGTTCACAACGACC 	2
----------------------CCGGATGATGGTTCACAACGACC 	127
----------------------CCGGATGATGGTTCACAACGAC 	13
----------------------CCGGATGATGGTTCACAACG 	2
----------------------CCGGATGATGGTTCACAACGA 	18
------------------------------------------------------------GTCGGTGGGACTTTCGTCCGTTT 	2
-------------------------------------------------------------TCGGTGGGACTTTCGTCCGT 	12
-------------------------------------------------------------TCGGTGGGACTTTCGTCCGTT 	234
-------------------------------------------------------------TCGGTGGGACTTTCGTCCG 	1
-------------------------------------------------------------TCGGTGGGACTTTCGTCCGTTT 	3592
--------------------------------------------------------------CGGTGGGACTTTCGTCCGTT 	3
--------------------------------------------------------------CGGTGGGACTTTCGTCCGTTT 	13


HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
7 Drosophila melanogaster GSM385822-16273 TCGGTGGGACTTTCGTCCGTTT CCGGATGATGGTTCACAACGACC down 3 1


Secondary structure

CCATGGTAATGGTACGGTGCGACCGGATGATGGTTCACAACGACCGTGTCATTTAAACGGGTCGGTGGGACTTTCGTCCGTTTGTAACGCCATTTGTCAACG
----------------------CCGGATGATGGTTCACAACGA 	42
----------------------CCGGATGATGGTTCACAACGACCG 	1
----------------------CCGGATGATGGTTCACAACG 	2
----------------------CCGGATGATGGTTCACAACGACC 	185
----------------------CCGGATGATGGTTCACAACGAC 	105
----------------------CCGGATGATGGTTCACAAC 	5
-----------------------CGGATGATGGTTCACAACGA 	1
-------------------------------------------------------------TCGGTGGGACTTTCGTCCG 	5
-------------------------------------------------------------TCGGTGGGACTTTCGTCCGTT 	308
-------------------------------------------------------------TCGGTGGGACTTTCGTCCGT 	31
-------------------------------------------------------------TCGGTGGGACTTTCGTCCGTTT 	5843
--------------------------------------------------------------CGGTGGGACTTTCGTCCGTTT 	18
--------------------------------------------------------------CGGTGGGACTTTCGTCCGTT 	2
---------------------------------------------------------------GGTGGGACTTTCGTCCGTT 	3
---------------------------------------------------------------GGTGGGACTTTCGTCCGTTT 	107
----------------------------------------------------------------GTGGGACTTTCGTCCGTTT 	1


HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
8 Drosophila melanogaster GSM360256-14324 TCGGTGGGACTTTCGTCCGTTT CCGGATGATGGTTCACAACGACC down 3 1


Secondary structure

CCATGGTAATGGTACGGTGCGACCGGATGATGGTTCACAACGACCGTGTCATTTAAACGGGTCGGTGGGACTTTCGTCCGTTTGTAACGCCATTTGTCAACG
----------------------CCGGATGATGGTTCACAACGACC 	6
----------------------CCGGATGATGGTTCACAACGAC 	1
-------------------------------------------------------------TCGGTGGGACTTTCGTCCGTT 	6
-------------------------------------------------------------TCGGTGGGACTTTCGTCCGTTT 	93
--------------------------------------------------------------CGGTGGGACTTTCGTCCGTTT 	2


HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
9 Drosophila melanogaster GSM466494_r2d2_heterozygotes_untreated TCGGTGGGACTTTCGTCCGTTT CCGGATGATGGTTCACAACGACC down 3 1


Secondary structure

CCATGGTAATGGTACGGTGCGACCGGATGATGGTTCACAACGACCGTGTCATTTAAACGGGTCGGTGGGACTTTCGTCCGTTTGTAACGCCATTTGTCAACG
----------------------CCGGATGATGGTTCACAACGA 	21
----------------------CCGGATGATGGTTCACAACG 	7
----------------------CCGGATGATGGTTCACAACGACC 	107
----------------------CCGGATGATGGTTCACAACGAC 	16
-----------------------CGGATGATGGTTCACAACGA 	1
------------------------------------------------------------GTCGGTGGGACTTTCGTCCGT 	1
-------------------------------------------------------------TCGGTGGGACTTTCGTCCG 	41
-------------------------------------------------------------TCGGTGGGACTTTCGTCCGTTTG 	5
-------------------------------------------------------------TCGGTGGGACTTTCGTCCGTT 	2687
-------------------------------------------------------------TCGGTGGGACTTTCGTCCGT 	308
-------------------------------------------------------------TCGGTGGGACTTTCGTCCGTTT 	9125
--------------------------------------------------------------CGGTGGGACTTTCGTCCGTTTG 	1
--------------------------------------------------------------CGGTGGGACTTTCGTCCGTTT 	56
--------------------------------------------------------------CGGTGGGACTTTCGTCCGTT 	18
---------------------------------------------------------------GGTGGGACTTTCGTCCGTT 	11
---------------------------------------------------------------GGTGGGACTTTCGTCCGTTT 	20
----------------------------------------------------------------GTGGGACTTTCGTCCGTTT 	1


HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
10 Drosophila melanogaster GSM466496_r2d2_homozygotes_untreated TCGGTGGGACTTTCGTCCGTTT CCGGATGATGGTTCACAACGACC down 3 1


Secondary structure

CCATGGTAATGGTACGGTGCGACCGGATGATGGTTCACAACGACCGTGTCATTTAAACGGGTCGGTGGGACTTTCGTCCGTTTGTAACGCCATTTGTCAACG
----------------------CCGGATGATGGTTCACAACGA 	30
----------------------CCGGATGATGGTTCACAACG 	3
----------------------CCGGATGATGGTTCACAACGACC 	191
----------------------CCGGATGATGGTTCACAACGACCGTG 	1
----------------------CCGGATGATGGTTCACAACGAC 	20
-----------------------CGGATGATGGTTCACAACGACC 	5
-------------------------------------------------------------TCGGTGGGACTTTCGTCCG 	30
-------------------------------------------------------------TCGGTGGGACTTTCGTCCGTTTG 	11
-------------------------------------------------------------TCGGTGGGACTTTCGTCCGTT 	3019
-------------------------------------------------------------TCGGTGGGACTTTCGTCCGT 	296
-------------------------------------------------------------TCGGTGGGACTTTCGTCCGTTT 	12496
--------------------------------------------------------------CGGTGGGACTTTCGTCCGTTT 	121
--------------------------------------------------------------CGGTGGGACTTTCGTCCGT 	1
--------------------------------------------------------------CGGTGGGACTTTCGTCCGTT 	24
---------------------------------------------------------------GGTGGGACTTTCGTCCGTT 	15
---------------------------------------------------------------GGTGGGACTTTCGTCCGTTT 	36
----------------------------------------------------------------GTGGGACTTTCGTCCGTTT 	1


HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
11 Drosophila melanogaster GSM286605-9793 TCGGTGGGACTTTCGTCCGTTT CCGGATGATGGTTCACAACGACC down 3 1


Secondary structure

CCATGGTAATGGTACGGTGCGACCGGATGATGGTTCACAACGACCGTGTCATTTAAACGGGTCGGTGGGACTTTCGTCCGTTTGTAACGCCATTTGTCAACG
----------------------CCGGATGATGGTTCACAACGA 	2
----------------------CCGGATGATGGTTCACAACGAC 	2
-------------------------------------------------------------TCGGTGGGACTTTCGTCCGTT 	22
-------------------------------------------------------------TCGGTGGGACTTTCGTCCGT 	3
-------------------------------------------------------------TCGGTGGGACTTTCGTCCGTTT 	206


HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
12 Drosophila melanogaster GSM343832-15149 TCGGTGGGACTTTCGTCCGTTT CCGGATGATGGTTCACAACGACC down 3 1


Secondary structure

CCATGGTAATGGTACGGTGCGACCGGATGATGGTTCACAACGACCGTGTCATTTAAACGGGTCGGTGGGACTTTCGTCCGTTTGTAACGCCATTTGTCAACG
----------------------CCGGATGATGGTTCACAACGACC 	6
-------------------------------------------------------------TCGGTGGGACTTTCGTCCGTT 	2
-------------------------------------------------------------TCGGTGGGACTTTCGTCCGTTT 	6


HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
13 Drosophila melanogaster GSM360260-14326 TCGGTGGGACTTTCGTCCGTTT CCGGATGATGGTTCACAACGACC down 3 1


Secondary structure

CCATGGTAATGGTACGGTGCGACCGGATGATGGTTCACAACGACCGTGTCATTTAAACGGGTCGGTGGGACTTTCGTCCGTTTGTAACGCCATTTGTCAACG
----------------------CCGGATGATGGTTCACAACGACC 	93
----------------------CCGGATGATGGTTCACAACGAC 	13
----------------------CCGGATGATGGTTCACAAC 	2
----------------------CCGGATGATGGTTCACAACGA 	7
-------------------------------------------------------------TCGGTGGGACTTTCGTCCGT 	2
-------------------------------------------------------------TCGGTGGGACTTTCGTCCGTT 	224
-------------------------------------------------------------TCGGTGGGACTTTCGTCCG 	3
-------------------------------------------------------------TCGGTGGGACTTTCGTCCGTTT 	1902
--------------------------------------------------------------CGGTGGGACTTTCGTCCGTT 	1
--------------------------------------------------------------CGGTGGGACTTTCGTCCGTTT 	15


HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
14 Drosophila melanogaster GSM322543-14323 TCGGTGGGACTTTCGTCCGTTT CCGGATGATGGTTCACAACGACC down 3 1


Secondary structure

CCATGGTAATGGTACGGTGCGACCGGATGATGGTTCACAACGACCGTGTCATTTAAACGGGTCGGTGGGACTTTCGTCCGTTTGTAACGCCATTTGTCAACG
----------------------CCGGATGATGGTTCACAACGAC 	56
----------------------CCGGATGATGGTTCACAACGACC 	447
----------------------CCGGATGATGGTTCACAACG 	1
----------------------CCGGATGATGGTTCACAACGA 	47
-----------------------CGGATGATGGTTCACAACGACC 	7
-------------------------------------------------------------TCGGTGGGACTTTCGTCCGTT 	2804
-------------------------------------------------------------TCGGTGGGACTTTCGTCCG 	25
-------------------------------------------------------------TCGGTGGGACTTTCGTCCGT 	135
-------------------------------------------------------------TCGGTGGGACTTTCGTCCGTTTG 	15
-------------------------------------------------------------TCGGTGGGACTTTCGTCCGTTT 	21768
--------------------------------------------------------------CGGTGGGACTTTCGTCCGTTT 	126
--------------------------------------------------------------CGGTGGGACTTTCGTCCGTT 	4


HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
15 Drosophila melanogaster GSM286607-9796 TCGGTGGGACTTTCGTCCGTTT CCGGATGATGGTTCACAACGACC down 3 1


Secondary structure

CCATGGTAATGGTACGGTGCGACCGGATGATGGTTCACAACGACCGTGTCATTTAAACGGGTCGGTGGGACTTTCGTCCGTTTGTAACGCCATTTGTCAACG
----------------------CCGGATGATGGTTCACAACGACC 	3
-------------------------------------------------------------TCGGTGGGACTTTCGTCCGTTT 	10
--------------------------------------------------------------CGGTGGGACTTTCGTCCGTTT 	1


HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
16 Drosophila melanogaster GSM286604-9792 TCGGTGGGACTTTCGTCCGTTT CCGGATGATGGTTCACAACGACC down 3 1


Secondary structure

CCATGGTAATGGTACGGTGCGACCGGATGATGGTTCACAACGACCGTGTCATTTAAACGGGTCGGTGGGACTTTCGTCCGTTTGTAACGCCATTTGTCAACG
----------------------CCGGATGATGGTTCACAACGACC 	32
----------------------CCGGATGATGGTTCACAACGAC 	6
----------------------CCGGATGATGGTTCACAACGA 	24
-------------------------------------------------------------TCGGTGGGACTTTCGTCCGT 	30
-------------------------------------------------------------TCGGTGGGACTTTCGTCCGTT 	272
-------------------------------------------------------------TCGGTGGGACTTTCGTCCG 	12
-------------------------------------------------------------TCGGTGGGACTTTCGTCCGTTT 	1940
--------------------------------------------------------------CGGTGGGACTTTCGTCCGTT 	1
--------------------------------------------------------------CGGTGGGACTTTCGTCCGTTT 	6


HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
17 Drosophila melanogaster GSM385744-16261 TCGGTGGGACTTTCGTCCGTTT CCGGATGATGGTTCACAACGACC down 3 1


Secondary structure

CCATGGTAATGGTACGGTGCGACCGGATGATGGTTCACAACGACCGTGTCATTTAAACGGGTCGGTGGGACTTTCGTCCGTTTGTAACGCCATTTGTCAACG
----------------------CCGGATGATGGTTCACAACGA 	50
----------------------CCGGATGATGGTTCACAACG 	4
----------------------CCGGATGATGGTTCACAACGACC 	202
----------------------CCGGATGATGGTTCACAACGAC 	135
----------------------CCGGATGATGGTTCACAAC 	2
-----------------------CGGATGATGGTTCACAACGACC 	3
-----------------------CGGATGATGGTTCACAACGA 	1
-------------------------------------------------------------TCGGTGGGACTTTCGTCCG 	10
-------------------------------------------------------------TCGGTGGGACTTTCGTCCGTTTG 	2
-------------------------------------------------------------TCGGTGGGACTTTCGTCCGTT 	691
-------------------------------------------------------------TCGGTGGGACTTTCGTCCGT 	78
-------------------------------------------------------------TCGGTGGGACTTTCGTCCGTTT 	11381
--------------------------------------------------------------CGGTGGGACTTTCGTCCGTTT 	15
--------------------------------------------------------------CGGTGGGACTTTCGTCCGTT 	2
---------------------------------------------------------------GGTGGGACTTTCGTCCGTT 	13
---------------------------------------------------------------GGTGGGACTTTCGTCCGTTT 	167
----------------------------------------------------------------GTGGGACTTTCGTCCGTTT 	4


HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
18 Drosophila melanogaster GSM322208-14317 TCGGTGGGACTTTCGTCCGTTT CCGGATGATGGTTCACAACGACC down 3 1


Secondary structure

CCATGGTAATGGTACGGTGCGACCGGATGATGGTTCACAACGACCGTGTCATTTAAACGGGTCGGTGGGACTTTCGTCCGTTTGTAACGCCATTTGTCAACG
----------------------CCGGATGATGGTTCACAACGA 	12
----------------------CCGGATGATGGTTCACAACG 	1
----------------------CCGGATGATGGTTCACAACGACC 	57
----------------------CCGGATGATGGTTCACAACGAC 	22
----------------------CCGGATGATGGTTCACAAC 	4
-----------------------CGGATGATGGTTCACAACG 	1
-------------------------------------------------------------TCGGTGGGACTTTCGTCCGTTTGTA 	5
-------------------------------------------------------------TCGGTGGGACTTTCGTCCGTT 	241
-------------------------------------------------------------TCGGTGGGACTTTCGTCCG 	43
-------------------------------------------------------------TCGGTGGGACTTTCGTCCGTTTGT 	11
-------------------------------------------------------------TCGGTGGGACTTTCGTCCGTTTG 	3
-------------------------------------------------------------TCGGTGGGACTTTCGTCCGT 	98
-------------------------------------------------------------TCGGTGGGACTTTCGTCCGTTT 	1113
--------------------------------------------------------------CGGTGGGACTTTCGTCCGT 	1
--------------------------------------------------------------CGGTGGGACTTTCGTCCGTTT 	9


HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
19 Drosophila melanogaster GSM385748-16264 TCGGTGGGACTTTCGTCCGTTT CCGGATGATGGTTCACAACGACC down 3 1


Secondary structure

CCATGGTAATGGTACGGTGCGACCGGATGATGGTTCACAACGACCGTGTCATTTAAACGGGTCGGTGGGACTTTCGTCCGTTTGTAACGCCATTTGTCAACG
----------------------CCGGATGATGGTTCACAACGA 	97
----------------------CCGGATGATGGTTCACAACG 	10
----------------------CCGGATGATGGTTCACAACGACC 	431
----------------------CCGGATGATGGTTCACAACGAC 	252
----------------------CCGGATGATGGTTCACAAC 	6
----------------------CCGGATGATGGTTCACAACGACCG 	1
-----------------------CGGATGATGGTTCACAACGAC 	2
-----------------------CGGATGATGGTTCACAACGACC 	3
-----------------------CGGATGATGGTTCACAACGA 	1
-------------------------------------------------------------TCGGTGGGACTTTCGTCCGTTTG 	5
-------------------------------------------------------------TCGGTGGGACTTTCGTCCGTT 	1339
-------------------------------------------------------------TCGGTGGGACTTTCGTCCG 	25
-------------------------------------------------------------TCGGTGGGACTTTCGTCCGT 	154
-------------------------------------------------------------TCGGTGGGACTTTCGTCCGTTT 	24803
--------------------------------------------------------------CGGTGGGACTTTCGTCCGTTT 	35
--------------------------------------------------------------CGGTGGGACTTTCGTCCGTT 	3
---------------------------------------------------------------GGTGGGACTTTCGTCCGTTT 	360
---------------------------------------------------------------GGTGGGACTTTCGTCCGTT 	21
----------------------------------------------------------------GTGGGACTTTCGTCCGTTT 	4


HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
20 Drosophila melanogaster GSM399110-16285 TCGGTGGGACTTTCGTCCGTTT CCGGATGATGGTTCACAACGACC down 3 1


Secondary structure

CCATGGTAATGGTACGGTGCGACCGGATGATGGTTCACAACGACCGTGTCATTTAAACGGGTCGGTGGGACTTTCGTCCGTTTGTAACGCCATTTGTCAACG
----------------------CCGGATGATGGTTCACAACGACC 	97
----------------------CCGGATGATGGTTCACAACGAC 	20
----------------------CCGGATGATGGTTCACAACG 	1
----------------------CCGGATGATGGTTCACAACGA 	3
-----------------------CGGATGATGGTTCACAACGACC 	2
-------------------------------------------------------------TCGGTGGGACTTTCGTCCGT 	14
-------------------------------------------------------------TCGGTGGGACTTTCGTCCGTT 	324
-------------------------------------------------------------TCGGTGGGACTTTCGTCCG 	5
-------------------------------------------------------------TCGGTGGGACTTTCGTCCGTTT 	1871
--------------------------------------------------------------CGGTGGGACTTTCGTCCGTTT 	9


HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
21 Drosophila melanogaster GSM466492_dcr-2_homozygotes_untreated TCGGTGGGACTTTCGTCCGTTT CCGGATGATGGTTCACAACGACC down 3 1


Secondary structure

CCATGGTAATGGTACGGTGCGACCGGATGATGGTTCACAACGACCGTGTCATTTAAACGGGTCGGTGGGACTTTCGTCCGTTTGTAACGCCATTTGTCAACG
----------------------CCGGATGATGGTTCACAACGAC 	27
----------------------CCGGATGATGGTTCACAACGACC 	100
----------------------CCGGATGATGGTTCACAACGA 	16
------------------------GGATGATGGTTCACAACGA 	1
-------------------------------------------------------------TCGGTGGGACTTTCGTCCGTT 	2164
-------------------------------------------------------------TCGGTGGGACTTTCGTCCG 	27
-------------------------------------------------------------TCGGTGGGACTTTCGTCCGTTTGT 	1
-------------------------------------------------------------TCGGTGGGACTTTCGTCCGTTTG 	5
-------------------------------------------------------------TCGGTGGGACTTTCGTCCGT 	342
-------------------------------------------------------------TCGGTGGGACTTTCGTCCGTTT 	8807
--------------------------------------------------------------CGGTGGGACTTTCGTCCGT 	3
--------------------------------------------------------------CGGTGGGACTTTCGTCCGTTT 	76
--------------------------------------------------------------CGGTGGGACTTTCGTCCGTT 	13
---------------------------------------------------------------GGTGGGACTTTCGTCCGTTT 	39
---------------------------------------------------------------GGTGGGACTTTCGTCCGTT 	13
----------------------------------------------------------------GTGGGACTTTCGTCCGTTT 	2


HuntMi prediction: true miRNA