miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: deep sequencing predictions



Please select library, species and/or miRNA sequence.


selected mature miRNA sequence: TCGTGTCAAGCTGTGTGCATC

selected species: Selaginella moellendorffii



2 records found  

#specieslibrarymiRNAmiRNA*armmismatchesbulges
1 Selaginella moellendorffii GSM176654 TCGTGTCAAGCTGTGTGCATC TGCACTCAGCTTGACACGGCC down 1 0


Secondary structure

ATCAGTCGATGCGTCGAGCGCTGTGTTTTTGATGCACTCAGCTTGACACGGCCGTGCTTGGAAGTCTGGAAAGTTTTCTTTCACGCTCCACTGATGCTGCTGCTGCAATGCGTGCTCTCTCTCTTGGTCGTGTCAAGCTGTGTGCATCACAACGCATTGCTCGTTTTCAAGATCTCC
--------------------------------TGCACTCAGCTTGACACGGCC 	222
--------------------------------TGCACTCAGCTTGACACGGC 	19
------------------------------------------------------------------------------------------------------------------------------GTCGTGTCAAGCTGTGTGCATC 	4
-------------------------------------------------------------------------------------------------------------------------------TCGTGTCAAGCTGTGTGCATC 	6217
-------------------------------------------------------------------------------------------------------------------------------TCGTGTCAAGCTGTGTGCAT 	12
-------------------------------------------------------------------------------------------------------------------------------TCGTGTCAAGCTGTGTGCA 	1
-------------------------------------------------------------------------------------------------------------------------------TCGTGTCAAGCTGTGTGCATCA 	3
--------------------------------------------------------------------------------------------------------------------------------CGTGTCAAGCTGTGTGCATCA 	2
--------------------------------------------------------------------------------------------------------------------------------CGTGTCAAGCTGTGTGCATC 	22
---------------------------------------------------------------------------------------------------------------------------------GTGTCAAGCTGTGTGCATC 	3
------------------------------------------------------------------------------------------------------------------------------------------TGTGTGCATCACAACGCATTG 	1
------------------------------------------------------------------------------------------------------------------------------------------TGTGTGCATCACAACGCATT 	4

Overlaps with: MNEST044925 MNEST046738
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
2 Selaginella moellendorffii GSM176654 TCGTGTCAAGCTGTGTGCATC TGCACTCAGCTTGACACGGCC down 1 0


Secondary structure

ATGCTATACATCGTCGAGCGCTGTGTTTTTGATGCACTCAGCTTGACACGGCCGTGCTTGGAAGTCTGGAAAGTTTTCTTTCACGCTCCACTGATGCTGCTGCTGCAATGCGTGCTGACTCTCTCTCTCTCTCTTGGTCGTGTCAAGCTGTGTGCATCACAACGCATTGCTCGTTTTCAAGATTTCC
--------------------------------TGCACTCAGCTTGACACGGCC 	222
--------------------------------TGCACTCAGCTTGACACGGC 	19
----------------------------------------------------------------------------------------------------------------------------------------GTCGTGTCAAGCTGTGTGCATC 	4
-----------------------------------------------------------------------------------------------------------------------------------------TCGTGTCAAGCTGTGTGCATC 	6217
-----------------------------------------------------------------------------------------------------------------------------------------TCGTGTCAAGCTGTGTGCAT 	12
-----------------------------------------------------------------------------------------------------------------------------------------TCGTGTCAAGCTGTGTGCA 	1
-----------------------------------------------------------------------------------------------------------------------------------------TCGTGTCAAGCTGTGTGCATCA 	3
------------------------------------------------------------------------------------------------------------------------------------------CGTGTCAAGCTGTGTGCATCA 	2
------------------------------------------------------------------------------------------------------------------------------------------CGTGTCAAGCTGTGTGCATC 	22
-------------------------------------------------------------------------------------------------------------------------------------------GTGTCAAGCTGTGTGCATC 	3
----------------------------------------------------------------------------------------------------------------------------------------------------TGTGTGCATCACAACGCATTG 	1
----------------------------------------------------------------------------------------------------------------------------------------------------TGTGTGCATCACAACGCATT 	4


HuntMi prediction: true miRNA