miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: deep sequencing predictions



Please select library, species and/or miRNA sequence.


selected mature miRNA sequence: TCTGACCGGTGGGCCTGAGCG

selected species: Brachypodium distachyon



1 records found  

#specieslibrarymiRNAmiRNA*armmismatchesbulges
1 Brachypodium distachyon GSM506621-23192 TCTGACCGGTGGGCCTGAGCG CTTGGGACCGCCGGTCAGAGC down 1 0


Secondary structure

CCCAAATTATTGATTAGGGGCATTTGATAGGAAATTTAACTGCTTGGGACCGCCGGTCAGAGCCATGTGGCAGACAAAATGTGACTATGATCCAACTCTGACCCATAGCACAATATATCGAACTTAGTCCTTGCCACTCGGGCCCATCGATCACGGTTTTTTTTTGCCATATGGCTCTGACCGGTGGGCCTGAGCGATTAGATTGCCTGTCAAATATCCTAATCTCGAAAAATGG
------------------------------------TAACTGCTTGGGACCGCCGGTC 	2
---------------------------------------------GGGACCGCCGGTCAGAGCCA 	1
--------------------------------------------------CGCCGGTCAGAGCCATGTGGC 	1
----------------------------------------------------CCGGTCAGAGCCATGTGGCAG 	1
---------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCATATGGCTCTGACCGGTG 	1
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------CATATGGCTCTGACCGGTGGG 	1
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTGACCGGTGGGCCTGAGC 	1
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTGACCGGTGGGCCTGAGCG 	20
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGACCGGTGGGCCTGAGCGA 	1


HuntMi prediction: true miRNA