miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: deep sequencing predictions



Please select library, species and/or miRNA sequence.


selected mature miRNA sequence: TCTTCTCTGTTTTGGCCATGTG

selected species: Homo sapiens



1 records found  

#specieslibrarymiRNAmiRNA*armmismatchesbulges
1 Homo sapiens GSM494811_K562 TCTTCTCTGTTTTGGCCATGTG CATGGCCGAAACAGAGAAGTTA up 1 0


Secondary structure

ACTTTCTTCTTCAGCAAACATTAGGAGAGTATCTTCTCTGTTTTGGCCATGTGTGTACTCACAGCCCCTCACACATGGCCGAAACAGAGAAGTTACTTTCCTAATATTTGCCTCCTTGGAGTG
-------------------------------TCTTCTCTGTTTTGGCCATGTG 	29
-------------------------------TCTTCTCTGTTTTGGCCATGT 	7
-------------------------------TCTTCTCTGTTTTGGCCATGTGT 	4
---------------------------------TTCTCTGTTTTGGCCATGTGTGT 	6
---------------------------------TTCTCTGTTTTGGCCATGTGTG 	4
---------------------------------TTCTCTGTTTTGGCCATGTGT 	3
----------------------------------TCTCTGTTTTGGCCATGTGTG 	1
-----------------------------------------------------------------------CACATGGCCGAAACAGAGAAGT 	5
-------------------------------------------------------------------------CATGGCCGAAACAGAGAAGTTA 	5
-------------------------------------------------------------------------CATGGCCGAAACAGAGAAGTT 	1
-------------------------------------------------------------------------CATGGCCGAAACAGAGAAG 	1

Overlaps with: MNEST029044
Overlaps with miRBase pre-miRNAs: ptr-mir-942 hsa-mir-942
HuntMi prediction: true miRNA