miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: deep sequencing predictions



Please select library, species and/or miRNA sequence.


selected mature miRNA sequence: TCTTTCCTACTCCTCCCATTCC

selected species: Vitis vinifera



1 records found  

#specieslibrarymiRNAmiRNA*armmismatchesbulges
1 Vitis vinifera GSM458929-2717 TCTTTCCTACTCCTCCCATTCC AATTGGAGAGTAGGAAAGCTT down 2 1


Secondary structure

GGTCTGAAGTGTGAAGTCGTTTGTTTCCTGAGAATGTTTGGGAATTGGAGAGTAGGAAAGCTTAGCCATCTATTCCCTTCATGGTTTCCTCTCCATGGATTGGGGGTCTAGAGCTAGTCTTTCCTACTCCTCCCATTCCTATTGTTTTCGGGGATTTCCGTTTCTCTTCTCTTAACAA
---------------------------------------GGGAATTGGAGAGTAGGAAAG 	1
------------------------------------------AATTGGAGAGTAGGAAAGCTT 	44
------------------------------------------AATTGGAGAGTAGGAAAGCT 	3
------------------------------------------AATTGGAGAGTAGGAAAGC 	1
---------------------------------------------TGGAGAGTAGGAAAGCTTAGC 	2
---------------------------------------------TGGAGAGTAGGAAAGCTTA 	2
---------------------------------------------------------------------------------------------------------------------TCTTTCCTACTCCTCCCATTCC 	64
---------------------------------------------------------------------------------------------------------------------TCTTTCCTACTCCTCCCATTC 	5

Overlaps with: MNEST041687 MNEST054895
Overlaps with miRBase pre-miRNAs: vvi-MIR482
HuntMi prediction: true miRNA