miRNEST 2.0, an integrative microRNA resource :: deep sequencing predictions

Please select library, species and/or miRNA sequence.

selected mature miRNA sequence: TGAAGCTGCCAGCATGATCTA

selected species: Oryza sativa

39 records found

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
1	Oryza sativa	GSM693280	TGAAGCTGCCAGCATGATCTA	GATCATGCATGACAGCCTCATT	up	2	1

Secondary structure

AGATGATGATGATGGTGCTAGTGTGAATGAGTGAAGCTGCCAGCATGATCTAGCTCTGATTAATCGGCACTGTTGGCGTACAGTCGATTGACTAATCGTCAGATCTGTGTGTGTAAATCACTGTTAGATCATGCATGACAGCCTCATTTCTTCACACTGTTGGGCATGTGTTAAAC
-------------------------------TGAAGCTGCCAGCATGATCTA 	1628
-------------------------------TGAAGCTGCCAGCATGATCT 	74
-------------------------------TGAAGCTGCCAGCATGATC 	10
--------------------------------GAAGCTGCCAGCATGATCTA 	8
---------------------------------AAGCTGCCAGCATGATCTA 	1
---------------------------------------------------------------------------------------------------------------------TCACTGTTAGATCATGCATGA 	1
------------------------------------------------------------------------------------------------------------------------CTGTTAGATCATGCATGACAGC 	1
-----------------------------------------------------------------------------------------------------------------------------AGATCATGCATGACAGCCTCATT 	1
-------------------------------------------------------------------------------------------------------------------------------ATCATGCATGACAGCCTCATT 	1

Overlaps with: MNEST041951 MNEST048858 MNEST048859
Overlaps with miRBase pre-miRNAs: osa-MIR167a
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
2	Oryza sativa	GSM693280	TGAAGCTGCCAGCATGATCTA	GGTCATGCTGCGGCAGCCTCACT	up	1	2

Secondary structure

TGAACTGTCCAAGGGAACGAGTGAAGCTGCCAGCATGATCTAGCTCTGAATGATCAACAAGATGTGCTCCCACACTGCCTTCCTGTGGATCTTGAGCTGTTGCTAGTCTTGTGGTCATGCCTTGCTAGGTCATGCTGCGGCAGCCTCACTTCTTCCCATTGTTGGGCA
---------------------TGAAGCTGCCAGCATGATCTA 	1628
---------------------TGAAGCTGCCAGCATGATCT 	74
---------------------TGAAGCTGCCAGCATGATC 	10
----------------------GAAGCTGCCAGCATGATCTA 	8
-----------------------AAGCTGCCAGCATGATCTA 	1
-------------------------------------------------------------------------------------------------------------------------------GGTCATGCTGCGGCAGCCTCACT 	6

Overlaps with: MNEST041953 MNEST048861
Overlaps with miRBase pre-miRNAs: osa-MIR167c
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
3	Oryza sativa	GSM693280	TGAAGCTGCCAGCATGATCTA	GATCATGCTGTGACAGTTTCACT	up	1	2

Secondary structure

TCCGGTGCCCAAGAGAAAGCGTGAAGCTGCCAGCATGATCTAACTTGCAGACAAGAAATCAGCTCAGCTCGCTGGTTTCGAACAGGAAGGCGGCTAGCTGAGGCTTCTTCTGAGTACGTGATGGTTAGATCATGCTGTGACAGTTTCACTCCTTCCCTGTTGGGCACA
---------------------TGAAGCTGCCAGCATGATCTA 	1628
---------------------TGAAGCTGCCAGCATGATCT 	74
---------------------TGAAGCTGCCAGCATGATC 	10
---------------------TGAAGCTGCCAGCATGATCTAA 	1
----------------------GAAGCTGCCAGCATGATCTA 	8
-----------------------AAGCTGCCAGCATGATCTA 	1
--------------------------------------------------------------------------------------------------------------------------------ATCATGCTGTGACAGTTTCACT 	4

Overlaps with: MNEST041952 MNEST048860
Overlaps with miRBase pre-miRNAs: osa-MIR167b
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
4	Oryza sativa	GSM571078-22531	TGAAGCTGCCAGCATGATCTA	GATCATGCATGACAGCCTCATT	up	2	1

Secondary structure

AGATGATGATGATGGTGCTAGTGTGAATGAGTGAAGCTGCCAGCATGATCTAGCTCTGATTAATCGGCACTGTTGGCGTACAGTCGATTGACTAATCGTCAGATCTGTGTGTGTAAATCACTGTTAGATCATGCATGACAGCCTCATTTCTTCACACTGTTGGGCATGTGTTAAAC
-------------------------------TGAAGCTGCCAGCATGATCTAG 	17
-------------------------------TGAAGCTGCCAGCATGATCTA 	7930
-------------------------------TGAAGCTGCCAGCATGATCT 	350
-------------------------------TGAAGCTGCCAGCATGATC 	124
--------------------------------GAAGCTGCCAGCATGATCTA 	129
--------------------------------GAAGCTGCCAGCATGATCT 	9
--------------------------------GAAGCTGCCAGCATGATCTAG 	1
---------------------------------AAGCTGCCAGCATGATCTA 	23
------------------------------------------------------------------------------------------------------------------------------GATCATGCATGACAGCCTCATT 	2
-------------------------------------------------------------------------------------------------------------------------------ATCATGCATGACAGCCTCATT 	7

Overlaps with: MNEST041951 MNEST048858 MNEST048859
Overlaps with miRBase pre-miRNAs: osa-MIR167a
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
5	Oryza sativa	GSM571078-22531	TGAAGCTGCCAGCATGATCTA	GGTCATGCTGCGGCAGCCTCACT	up	1	2

Secondary structure

TGAACTGTCCAAGGGAACGAGTGAAGCTGCCAGCATGATCTAGCTCTGAATGATCAACAAGATGTGCTCCCACACTGCCTTCCTGTGGATCTTGAGCTGTTGCTAGTCTTGTGGTCATGCCTTGCTAGGTCATGCTGCGGCAGCCTCACTTCTTCCCATTGTTGGGCA
---------------------TGAAGCTGCCAGCATGATCTAG 	17
---------------------TGAAGCTGCCAGCATGATCTA 	7930
---------------------TGAAGCTGCCAGCATGATCT 	350
---------------------TGAAGCTGCCAGCATGATC 	124
----------------------GAAGCTGCCAGCATGATCTA 	129
----------------------GAAGCTGCCAGCATGATCT 	9
----------------------GAAGCTGCCAGCATGATCTAG 	1
-----------------------AAGCTGCCAGCATGATCTA 	23
----------------------------------------------------------------------------------------------------------TCTTGTGGTCATGCCTTGCTA 	3
------------------------------------------------------------------------------------------------------------TTGTGGTCATGCCTTGCTA 	2
-------------------------------------------------------------------------------------------------------------------------------GGTCATGCTGCGGCAGCCTCACT 	2

Overlaps with: MNEST041953 MNEST048861
Overlaps with miRBase pre-miRNAs: osa-MIR167c
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
6	Oryza sativa	GSM571078-22531	TGAAGCTGCCAGCATGATCTA	GATCATGCTGTGACAGTTTCACT	up	1	2

Secondary structure

TCCGGTGCCCAAGAGAAAGCGTGAAGCTGCCAGCATGATCTAACTTGCAGACAAGAAATCAGCTCAGCTCGCTGGTTTCGAACAGGAAGGCGGCTAGCTGAGGCTTCTTCTGAGTACGTGATGGTTAGATCATGCTGTGACAGTTTCACTCCTTCCCTGTTGGGCACA
---------------------TGAAGCTGCCAGCATGATCTA 	7930
---------------------TGAAGCTGCCAGCATGATCT 	350
---------------------TGAAGCTGCCAGCATGATC 	124
---------------------TGAAGCTGCCAGCATGATCTAA 	13
----------------------GAAGCTGCCAGCATGATCTA 	129
----------------------GAAGCTGCCAGCATGATCT 	9
-----------------------AAGCTGCCAGCATGATCTA 	23
--------------------------------------------------------------------------------------------------------------------------------ATCATGCTGTGACAGTTTCACT 	2

Overlaps with: MNEST041952 MNEST048860
Overlaps with miRBase pre-miRNAs: osa-MIR167b
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
7	Oryza sativa	GSM520638-18676	TGAAGCTGCCAGCATGATCTA	GATCATGCATGACAGCCTCATT	up	2	1

Secondary structure

AGATGATGATGATGGTGCTAGTGTGAATGAGTGAAGCTGCCAGCATGATCTAGCTCTGATTAATCGGCACTGTTGGCGTACAGTCGATTGACTAATCGTCAGATCTGTGTGTGTAAATCACTGTTAGATCATGCATGACAGCCTCATTTCTTCACACTGTTGGGCATGTGTTAAAC
-------------------------------TGAAGCTGCCAGCATGATCT 	428
-------------------------------TGAAGCTGCCAGCATGATCTA 	6240
-------------------------------TGAAGCTGCCAGCATGATCTAG 	54
-------------------------------TGAAGCTGCCAGCATGATCTAGCT 	1
-------------------------------TGAAGCTGCCAGCATGATC 	77
--------------------------------GAAGCTGCCAGCATGATCTA 	6
---------------------------------AAGCTGCCAGCATGATCTA 	5
-------------------------------------TGCCAGCATGATCTAGCTC 	1
-------------------------------------------------------------------------------------------------------------------------------ATCATGCATGACAGCCTCATT 	7

Overlaps with: MNEST041951 MNEST048858 MNEST048859
Overlaps with miRBase pre-miRNAs: osa-MIR167a
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
8	Oryza sativa	GSM520638-18676	TGAAGCTGCCAGCATGATCTA	GGTCATGCTGCGGCAGCCTCACT	up	1	2

Secondary structure

TGAACTGTCCAAGGGAACGAGTGAAGCTGCCAGCATGATCTAGCTCTGAATGATCAACAAGATGTGCTCCCACACTGCCTTCCTGTGGATCTTGAGCTGTTGCTAGTCTTGTGGTCATGCCTTGCTAGGTCATGCTGCGGCAGCCTCACTTCTTCCCATTGTTGGGCA
---------------------TGAAGCTGCCAGCATGATCT 	428
---------------------TGAAGCTGCCAGCATGATCTA 	6240
---------------------TGAAGCTGCCAGCATGATCTAG 	54
---------------------TGAAGCTGCCAGCATGATCTAGCT 	1
---------------------TGAAGCTGCCAGCATGATC 	77
----------------------GAAGCTGCCAGCATGATCTA 	6
-----------------------AAGCTGCCAGCATGATCTA 	5
---------------------------TGCCAGCATGATCTAGCTC 	1
----------------------------------------------------------------------------------------------------------TCTTGTGGTCATGCCTTGCTA 	9

Overlaps with: MNEST041953 MNEST048861
Overlaps with miRBase pre-miRNAs: osa-MIR167c
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
9	Oryza sativa	GSM520638-18676	TGAAGCTGCCAGCATGATCTA	GATCATGCTGTGACAGTTTCACT	up	1	2

Secondary structure

TCCGGTGCCCAAGAGAAAGCGTGAAGCTGCCAGCATGATCTAACTTGCAGACAAGAAATCAGCTCAGCTCGCTGGTTTCGAACAGGAAGGCGGCTAGCTGAGGCTTCTTCTGAGTACGTGATGGTTAGATCATGCTGTGACAGTTTCACTCCTTCCCTGTTGGGCACA
---------------------TGAAGCTGCCAGCATGATCTAACT 	1
---------------------TGAAGCTGCCAGCATGATCT 	428
---------------------TGAAGCTGCCAGCATGATCTAA 	91
---------------------TGAAGCTGCCAGCATGATCTA 	6240
---------------------TGAAGCTGCCAGCATGATC 	77
----------------------GAAGCTGCCAGCATGATCTA 	6
-----------------------AAGCTGCCAGCATGATCTA 	5
--------------------------------------------------------------------------------------------------------------------------------ATCATGCTGTGACAGTTTCACT 	4

Overlaps with: MNEST041952 MNEST048860
Overlaps with miRBase pre-miRNAs: osa-MIR167b
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
10	Oryza sativa	GSM686040-31373	TGAAGCTGCCAGCATGATCTA	GATCATGCATGACAGCCTCATT	up	2	1

Secondary structure

AGATGATGATGATGGTGCTAGTGTGAATGAGTGAAGCTGCCAGCATGATCTAGCTCTGATTAATCGGCACTGTTGGCGTACAGTCGATTGACTAATCGTCAGATCTGTGTGTGTAAATCACTGTTAGATCATGCATGACAGCCTCATTTCTTCACACTGTTGGGCATGTGTTAAAC
-------------------------------TGAAGCTGCCAGCATGATCTAGC 	2
-------------------------------TGAAGCTGCCAGCATGATCTAG 	118
-------------------------------TGAAGCTGCCAGCATGATCTA 	40863
-------------------------------TGAAGCTGCCAGCATGATCT 	3219
-------------------------------TGAAGCTGCCAGCATGATC 	307
--------------------------------GAAGCTGCCAGCATGATCTAG 	2
--------------------------------GAAGCTGCCAGCATGATCTA 	173
--------------------------------GAAGCTGCCAGCATGATCT 	15
---------------------------------AAGCTGCCAGCATGATCTA 	42
-------------------------------------TGCCAGCATGATCTAGCTCT 	2
----------------------------------------------------------------------------------------------------------------------CACTGTTAGATCATGCATGACAGC 	1
-----------------------------------------------------------------------------------------------------------------------------AGATCATGCATGACAGCCTCATT 	3
------------------------------------------------------------------------------------------------------------------------------GATCATGCATGACAGCCTCATT 	5
-------------------------------------------------------------------------------------------------------------------------------ATCATGCATGACAGCCTCATT 	11

Overlaps with: MNEST041951 MNEST048858 MNEST048859
Overlaps with miRBase pre-miRNAs: osa-MIR167a
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
11	Oryza sativa	GSM686040-31373	TGAAGCTGCCAGCATGATCTA	GGTCATGCTGCGGCAGCCTCACT	up	1	2

Secondary structure

TGAACTGTCCAAGGGAACGAGTGAAGCTGCCAGCATGATCTAGCTCTGAATGATCAACAAGATGTGCTCCCACACTGCCTTCCTGTGGATCTTGAGCTGTTGCTAGTCTTGTGGTCATGCCTTGCTAGGTCATGCTGCGGCAGCCTCACTTCTTCCCATTGTTGGGCA
---------------------TGAAGCTGCCAGCATGATCTAGC 	2
---------------------TGAAGCTGCCAGCATGATCTAG 	118
---------------------TGAAGCTGCCAGCATGATCTA 	40863
---------------------TGAAGCTGCCAGCATGATCT 	3219
---------------------TGAAGCTGCCAGCATGATC 	307
----------------------GAAGCTGCCAGCATGATCTAG 	2
----------------------GAAGCTGCCAGCATGATCTA 	173
----------------------GAAGCTGCCAGCATGATCT 	15
-----------------------AAGCTGCCAGCATGATCTA 	42
---------------------------TGCCAGCATGATCTAGCTCT 	2
-------------------------------------------------------------------------------------------------------------------------------GGTCATGCTGCGGCAGCCTCACT 	11
-------------------------------------------------------------------------------------------------------------------------------GGTCATGCTGCGGCAGCCTCAC 	2
---------------------------------------------------------------------------------------------------------------------------------TCATGCTGCGGCAGCCTCACT 	1

Overlaps with: MNEST041953 MNEST048861
Overlaps with miRBase pre-miRNAs: osa-MIR167c
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
12	Oryza sativa	GSM686040-31373	TGAAGCTGCCAGCATGATCTA	GATCATGCTGTGACAGTTTCACT	up	1	2

Secondary structure

TCCGGTGCCCAAGAGAAAGCGTGAAGCTGCCAGCATGATCTAACTTGCAGACAAGAAATCAGCTCAGCTCGCTGGTTTCGAACAGGAAGGCGGCTAGCTGAGGCTTCTTCTGAGTACGTGATGGTTAGATCATGCTGTGACAGTTTCACTCCTTCCCTGTTGGGCACA
-------------------CGTGAAGCTGCCAGCATGATCTA 	3
---------------------TGAAGCTGCCAGCATGATCTAACT 	1
---------------------TGAAGCTGCCAGCATGATCTAAC 	2
---------------------TGAAGCTGCCAGCATGATCTAA 	24
---------------------TGAAGCTGCCAGCATGATCTA 	40863
---------------------TGAAGCTGCCAGCATGATCT 	3219
---------------------TGAAGCTGCCAGCATGATC 	307
----------------------GAAGCTGCCAGCATGATCTAA 	1
----------------------GAAGCTGCCAGCATGATCTA 	173
----------------------GAAGCTGCCAGCATGATCT 	15
-----------------------AAGCTGCCAGCATGATCTA 	42
----------------------------------------------------------------------------------------------------------------------------TTAGATCATGCTGTGACAGTTTC 	1
--------------------------------------------------------------------------------------------------------------------------------ATCATGCTGTGACAGTTTCACT 	24

Overlaps with: MNEST041952 MNEST048860
Overlaps with miRBase pre-miRNAs: osa-MIR167b
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
13	Oryza sativa	GSM520640-18679	TGAAGCTGCCAGCATGATCTA	GATCATGCATGACAGCCTCATT	up	2	1

Secondary structure

AGATGATGATGATGGTGCTAGTGTGAATGAGTGAAGCTGCCAGCATGATCTAGCTCTGATTAATCGGCACTGTTGGCGTACAGTCGATTGACTAATCGTCAGATCTGTGTGTGTAAATCACTGTTAGATCATGCATGACAGCCTCATTTCTTCACACTGTTGGGCATGTGTTAAAC
------------------------------GTGAAGCTGCCAGCATGATCTA 	1
-------------------------------TGAAGCTGCCAGCATGATC 	90
-------------------------------TGAAGCTGCCAGCATGATCT 	449
-------------------------------TGAAGCTGCCAGCATGATCTA 	12963
-------------------------------TGAAGCTGCCAGCATGATCTAG 	76
--------------------------------GAAGCTGCCAGCATGATCTA 	15
--------------------------------GAAGCTGCCAGCATGATCT 	3
---------------------------------AAGCTGCCAGCATGATCTA 	4
-------------------------------------TGCCAGCATGATCTAGCTCTGAT 	2
----------------------------------------------------------------------------------------------------------------------------TAGATCATGCATGACAGCCTC 	1
-------------------------------------------------------------------------------------------------------------------------------ATCATGCATGACAGCCTCATT 	15
--------------------------------------------------------------------------------------------------------------------------------TCATGCATGACAGCCTCATT 	1

Overlaps with: MNEST041951 MNEST048858 MNEST048859
Overlaps with miRBase pre-miRNAs: osa-MIR167a
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
14	Oryza sativa	GSM520640-18679	TGAAGCTGCCAGCATGATCTA	GGTCATGCTGCGGCAGCCTCACT	up	1	2

Secondary structure

TGAACTGTCCAAGGGAACGAGTGAAGCTGCCAGCATGATCTAGCTCTGAATGATCAACAAGATGTGCTCCCACACTGCCTTCCTGTGGATCTTGAGCTGTTGCTAGTCTTGTGGTCATGCCTTGCTAGGTCATGCTGCGGCAGCCTCACTTCTTCCCATTGTTGGGCA
--------------------GTGAAGCTGCCAGCATGATCTA 	1
---------------------TGAAGCTGCCAGCATGATC 	90
---------------------TGAAGCTGCCAGCATGATCT 	449
---------------------TGAAGCTGCCAGCATGATCTA 	12963
---------------------TGAAGCTGCCAGCATGATCTAG 	76
----------------------GAAGCTGCCAGCATGATCTA 	15
----------------------GAAGCTGCCAGCATGATCT 	3
-----------------------AAGCTGCCAGCATGATCTA 	4
----------------------------------------------------------------------------------------------------------TCTTGTGGTCATGCCTTGCTA 	11
--------------------------------------------------------------------------------------------------------------------------TGCTAGGTCATGCTGCGGCAGC 	1

Overlaps with: MNEST041953 MNEST048861
Overlaps with miRBase pre-miRNAs: osa-MIR167c
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
15	Oryza sativa	GSM520640-18679	TGAAGCTGCCAGCATGATCTA	GATCATGCTGTGACAGTTTCACT	up	1	2

Secondary structure

TCCGGTGCCCAAGAGAAAGCGTGAAGCTGCCAGCATGATCTAACTTGCAGACAAGAAATCAGCTCAGCTCGCTGGTTTCGAACAGGAAGGCGGCTAGCTGAGGCTTCTTCTGAGTACGTGATGGTTAGATCATGCTGTGACAGTTTCACTCCTTCCCTGTTGGGCACA
--------------------GTGAAGCTGCCAGCATGATCTA 	1
---------------------TGAAGCTGCCAGCATGATC 	90
---------------------TGAAGCTGCCAGCATGATCTAACT 	2
---------------------TGAAGCTGCCAGCATGATCT 	449
---------------------TGAAGCTGCCAGCATGATCTAA 	139
---------------------TGAAGCTGCCAGCATGATCTA 	12963
----------------------GAAGCTGCCAGCATGATCTA 	15
----------------------GAAGCTGCCAGCATGATCT 	3
-----------------------AAGCTGCCAGCATGATCTA 	4
--------------------------------------------------------------------------------------------------------------------------------ATCATGCTGTGACAGTTTCACT 	2

Overlaps with: MNEST041952 MNEST048860
Overlaps with miRBase pre-miRNAs: osa-MIR167b
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
16	Oryza sativa	GSM571077-22529	TGAAGCTGCCAGCATGATCTA	GATCATGCATGACAGCCTCATT	up	2	1

Secondary structure

AGATGATGATGATGGTGCTAGTGTGAATGAGTGAAGCTGCCAGCATGATCTAGCTCTGATTAATCGGCACTGTTGGCGTACAGTCGATTGACTAATCGTCAGATCTGTGTGTGTAAATCACTGTTAGATCATGCATGACAGCCTCATTTCTTCACACTGTTGGGCATGTGTTAAAC
-------------------------------TGAAGCTGCCAGCATGATCTAG 	17
-------------------------------TGAAGCTGCCAGCATGATCTA 	7516
-------------------------------TGAAGCTGCCAGCATGATCT 	298
-------------------------------TGAAGCTGCCAGCATGATC 	125
--------------------------------GAAGCTGCCAGCATGATCTA 	126
--------------------------------GAAGCTGCCAGCATGATCT 	6
--------------------------------GAAGCTGCCAGCATGATCTAG 	1
---------------------------------AAGCTGCCAGCATGATCTA 	16
---------------------------------------------------------------------------------------------------------------------TCACTGTTAGATCATGCATGAC 	1
----------------------------------------------------------------------------------------------------------------------CACTGTTAGATCATGCATGACAGC 	1
------------------------------------------------------------------------------------------------------------------------------GATCATGCATGACAGCCTCATT 	5
-------------------------------------------------------------------------------------------------------------------------------ATCATGCATGACAGCCTCATT 	4
--------------------------------------------------------------------------------------------------------------------------------TCATGCATGACAGCCTCATT 	1

Overlaps with: MNEST041951 MNEST048858 MNEST048859
Overlaps with miRBase pre-miRNAs: osa-MIR167a
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
17	Oryza sativa	GSM571077-22529	TGAAGCTGCCAGCATGATCTA	GGTCATGCTGCGGCAGCCTCACT	up	1	2

Secondary structure

TGAACTGTCCAAGGGAACGAGTGAAGCTGCCAGCATGATCTAGCTCTGAATGATCAACAAGATGTGCTCCCACACTGCCTTCCTGTGGATCTTGAGCTGTTGCTAGTCTTGTGGTCATGCCTTGCTAGGTCATGCTGCGGCAGCCTCACTTCTTCCCATTGTTGGGCA
---------------------TGAAGCTGCCAGCATGATCTAG 	17
---------------------TGAAGCTGCCAGCATGATCTA 	7516
---------------------TGAAGCTGCCAGCATGATCT 	298
---------------------TGAAGCTGCCAGCATGATC 	125
----------------------GAAGCTGCCAGCATGATCTA 	126
----------------------GAAGCTGCCAGCATGATCT 	6
----------------------GAAGCTGCCAGCATGATCTAG 	1
-----------------------AAGCTGCCAGCATGATCTA 	16
----------------------------------------------------------------------------------------------------------TCTTGTGGTCATGCCTTGCTA 	4
-------------------------------------------------------------------------------------------------------------------------------GGTCATGCTGCGGCAGCCTCACT 	2

Overlaps with: MNEST041953 MNEST048861
Overlaps with miRBase pre-miRNAs: osa-MIR167c
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
18	Oryza sativa	GSM571077-22529	TGAAGCTGCCAGCATGATCTA	GATCATGCTGTGACAGTTTCACT	up	1	2

Secondary structure

TCCGGTGCCCAAGAGAAAGCGTGAAGCTGCCAGCATGATCTAACTTGCAGACAAGAAATCAGCTCAGCTCGCTGGTTTCGAACAGGAAGGCGGCTAGCTGAGGCTTCTTCTGAGTACGTGATGGTTAGATCATGCTGTGACAGTTTCACTCCTTCCCTGTTGGGCACA
---------------------TGAAGCTGCCAGCATGATCTA 	7516
---------------------TGAAGCTGCCAGCATGATCT 	298
---------------------TGAAGCTGCCAGCATGATC 	125
---------------------TGAAGCTGCCAGCATGATCTAA 	1
----------------------GAAGCTGCCAGCATGATCTA 	126
----------------------GAAGCTGCCAGCATGATCT 	6
-----------------------AAGCTGCCAGCATGATCTA 	16
--------------------------------------------------------------------------------------------------------------------------------ATCATGCTGTGACAGTTTCACT 	1

Overlaps with: MNEST041952 MNEST048860
Overlaps with miRBase pre-miRNAs: osa-MIR167b
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
19	Oryza sativa	GSM686039-31370	TGAAGCTGCCAGCATGATCTA	GATCATGCATGACAGCCTCATT	up	2	1

Secondary structure

AGATGATGATGATGGTGCTAGTGTGAATGAGTGAAGCTGCCAGCATGATCTAGCTCTGATTAATCGGCACTGTTGGCGTACAGTCGATTGACTAATCGTCAGATCTGTGTGTGTAAATCACTGTTAGATCATGCATGACAGCCTCATTTCTTCACACTGTTGGGCATGTGTTAAAC
-------------------------------TGAAGCTGCCAGCATGATCTAG 	73
-------------------------------TGAAGCTGCCAGCATGATCTA 	42570
-------------------------------TGAAGCTGCCAGCATGATCT 	4306
-------------------------------TGAAGCTGCCAGCATGATC 	373
--------------------------------GAAGCTGCCAGCATGATCTAG 	1
--------------------------------GAAGCTGCCAGCATGATCTA 	175
--------------------------------GAAGCTGCCAGCATGATCT 	9
---------------------------------AAGCTGCCAGCATGATCTA 	41
-------------------------------------TGCCAGCATGATCTAGCTC 	1
----------------------------------------------------------------------------------------------------------------------------TAGATCATGCATGACAGCCTCATT 	1
-----------------------------------------------------------------------------------------------------------------------------AGATCATGCATGACAGCCTCATT 	4
------------------------------------------------------------------------------------------------------------------------------GATCATGCATGACAGCCTCATT 	38
-------------------------------------------------------------------------------------------------------------------------------ATCATGCATGACAGCCTCATT 	14
--------------------------------------------------------------------------------------------------------------------------------TCATGCATGACAGCCTCATT 	1

Overlaps with: MNEST041951 MNEST048858 MNEST048859
Overlaps with miRBase pre-miRNAs: osa-MIR167a
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
20	Oryza sativa	GSM686039-31370	TGAAGCTGCCAGCATGATCTA	GGTCATGCTGCGGCAGCCTCACT	up	1	2

Secondary structure

TGAACTGTCCAAGGGAACGAGTGAAGCTGCCAGCATGATCTAGCTCTGAATGATCAACAAGATGTGCTCCCACACTGCCTTCCTGTGGATCTTGAGCTGTTGCTAGTCTTGTGGTCATGCCTTGCTAGGTCATGCTGCGGCAGCCTCACTTCTTCCCATTGTTGGGCA
---------------------TGAAGCTGCCAGCATGATCTAG 	73
---------------------TGAAGCTGCCAGCATGATCTA 	42570
---------------------TGAAGCTGCCAGCATGATCT 	4306
---------------------TGAAGCTGCCAGCATGATC 	373
----------------------GAAGCTGCCAGCATGATCTAG 	1
----------------------GAAGCTGCCAGCATGATCTA 	175
----------------------GAAGCTGCCAGCATGATCT 	9
-----------------------AAGCTGCCAGCATGATCTA 	41
---------------------------TGCCAGCATGATCTAGCTC 	1
------------------------------------------GCTCTGAATGATCAACAAGATG 	3
----------------------------------------------------------------------------------------------------------TCTTGTGGTCATGCCTTGCTA 	5
-------------------------------------------------------------------------------------------------------------------------------GGTCATGCTGCGGCAGCCTCACT 	42
-------------------------------------------------------------------------------------------------------------------------------GGTCATGCTGCGGCAGCCTCAC 	3
--------------------------------------------------------------------------------------------------------------------------------GTCATGCTGCGGCAGCCTCACT 	1

Overlaps with: MNEST041953 MNEST048861
Overlaps with miRBase pre-miRNAs: osa-MIR167c
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
21	Oryza sativa	GSM686039-31370	TGAAGCTGCCAGCATGATCTA	GATCATGCTGTGACAGTTTCACT	up	1	2

Secondary structure

TCCGGTGCCCAAGAGAAAGCGTGAAGCTGCCAGCATGATCTAACTTGCAGACAAGAAATCAGCTCAGCTCGCTGGTTTCGAACAGGAAGGCGGCTAGCTGAGGCTTCTTCTGAGTACGTGATGGTTAGATCATGCTGTGACAGTTTCACTCCTTCCCTGTTGGGCACA
---------------------TGAAGCTGCCAGCATGATCTAACT 	3
---------------------TGAAGCTGCCAGCATGATCTAA 	11
---------------------TGAAGCTGCCAGCATGATCTA 	42570
---------------------TGAAGCTGCCAGCATGATCT 	4306
---------------------TGAAGCTGCCAGCATGATC 	373
----------------------GAAGCTGCCAGCATGATCTA 	175
----------------------GAAGCTGCCAGCATGATCT 	9
-----------------------AAGCTGCCAGCATGATCTA 	41
----------------------------------------------------------------------------------------------------------------------------TTAGATCATGCTGTGACAGTT 	1
-------------------------------------------------------------------------------------------------------------------------------GATCATGCTGTGACAGTTTCACT 	3
--------------------------------------------------------------------------------------------------------------------------------ATCATGCTGTGACAGTTTCACTC 	3
--------------------------------------------------------------------------------------------------------------------------------ATCATGCTGTGACAGTTTCACT 	87
--------------------------------------------------------------------------------------------------------------------------------ATCATGCTGTGACAGTTTCAC 	2
-----------------------------------------------------------------------------------------------------------------------------------ATGCTGTGACAGTTTCACT 	1

Overlaps with: MNEST041952 MNEST048860
Overlaps with miRBase pre-miRNAs: osa-MIR167b
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
22	Oryza sativa	GSM520634-18667	TGAAGCTGCCAGCATGATCTA	GATCATGCATGACAGCCTCATT	up	2	1

Secondary structure

AGATGATGATGATGGTGCTAGTGTGAATGAGTGAAGCTGCCAGCATGATCTAGCTCTGATTAATCGGCACTGTTGGCGTACAGTCGATTGACTAATCGTCAGATCTGTGTGTGTAAATCACTGTTAGATCATGCATGACAGCCTCATTTCTTCACACTGTTGGGCATGTGTTAAAC
-------------------------------TGAAGCTGCCAGCATGATCT 	5
-------------------------------TGAAGCTGCCAGCATGATCTA 	96
--------------------------------GAAGCTGCCAGCATGATCTA 	1

Overlaps with: MNEST041951 MNEST048858 MNEST048859
Overlaps with miRBase pre-miRNAs: osa-MIR167a
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
23	Oryza sativa	GSM520634-18667	TGAAGCTGCCAGCATGATCTA	GGTCATGCTGCGGCAGCCTCACT	up	1	2

Secondary structure

TGAACTGTCCAAGGGAACGAGTGAAGCTGCCAGCATGATCTAGCTCTGAATGATCAACAAGATGTGCTCCCACACTGCCTTCCTGTGGATCTTGAGCTGTTGCTAGTCTTGTGGTCATGCCTTGCTAGGTCATGCTGCGGCAGCCTCACTTCTTCCCATTGTTGGGCA
---------------------TGAAGCTGCCAGCATGATCT 	5
---------------------TGAAGCTGCCAGCATGATCTA 	96
----------------------GAAGCTGCCAGCATGATCTA 	1

Overlaps with: MNEST041953 MNEST048861
Overlaps with miRBase pre-miRNAs: osa-MIR167c
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
24	Oryza sativa	GSM520634-18667	TGAAGCTGCCAGCATGATCTA	GATCATGCTGTGACAGTTTCACT	up	1	2

Secondary structure

TCCGGTGCCCAAGAGAAAGCGTGAAGCTGCCAGCATGATCTAACTTGCAGACAAGAAATCAGCTCAGCTCGCTGGTTTCGAACAGGAAGGCGGCTAGCTGAGGCTTCTTCTGAGTACGTGATGGTTAGATCATGCTGTGACAGTTTCACTCCTTCCCTGTTGGGCACA
---------------------TGAAGCTGCCAGCATGATCT 	5
---------------------TGAAGCTGCCAGCATGATCTA 	96
---------------------TGAAGCTGCCAGCATGATCTAA 	4
----------------------GAAGCTGCCAGCATGATCTA 	1

Overlaps with: MNEST041952 MNEST048860
Overlaps with miRBase pre-miRNAs: osa-MIR167b
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
25	Oryza sativa	GSM520636-18672	TGAAGCTGCCAGCATGATCTA	GATCATGCATGACAGCCTCATT	up	2	1

Secondary structure

AGATGATGATGATGGTGCTAGTGTGAATGAGTGAAGCTGCCAGCATGATCTAGCTCTGATTAATCGGCACTGTTGGCGTACAGTCGATTGACTAATCGTCAGATCTGTGTGTGTAAATCACTGTTAGATCATGCATGACAGCCTCATTTCTTCACACTGTTGGGCATGTGTTAAAC
------------------------------GTGAAGCTGCCAGCATGATCTA 	1
-------------------------------TGAAGCTGCCAGCATGATCT 	9
-------------------------------TGAAGCTGCCAGCATGATCTA 	540
-------------------------------TGAAGCTGCCAGCATGATCTAG 	3
-------------------------------TGAAGCTGCCAGCATGATC 	2

Overlaps with: MNEST041951 MNEST048858 MNEST048859
Overlaps with miRBase pre-miRNAs: osa-MIR167a
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
26	Oryza sativa	GSM520636-18672	TGAAGCTGCCAGCATGATCTA	GGTCATGCTGCGGCAGCCTCACT	up	1	2

Secondary structure

TGAACTGTCCAAGGGAACGAGTGAAGCTGCCAGCATGATCTAGCTCTGAATGATCAACAAGATGTGCTCCCACACTGCCTTCCTGTGGATCTTGAGCTGTTGCTAGTCTTGTGGTCATGCCTTGCTAGGTCATGCTGCGGCAGCCTCACTTCTTCCCATTGTTGGGCA
--------------------GTGAAGCTGCCAGCATGATCTA 	1
---------------------TGAAGCTGCCAGCATGATCT 	9
---------------------TGAAGCTGCCAGCATGATCTA 	540
---------------------TGAAGCTGCCAGCATGATCTAG 	3
---------------------TGAAGCTGCCAGCATGATC 	2
----------------------------------------------------------------------------------------------------------TCTTGTGGTCATGCCTTGCTA 	1

Overlaps with: MNEST041953 MNEST048861
Overlaps with miRBase pre-miRNAs: osa-MIR167c
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
27	Oryza sativa	GSM520636-18672	TGAAGCTGCCAGCATGATCTA	GATCATGCTGTGACAGTTTCACT	up	1	2

Secondary structure

TCCGGTGCCCAAGAGAAAGCGTGAAGCTGCCAGCATGATCTAACTTGCAGACAAGAAATCAGCTCAGCTCGCTGGTTTCGAACAGGAAGGCGGCTAGCTGAGGCTTCTTCTGAGTACGTGATGGTTAGATCATGCTGTGACAGTTTCACTCCTTCCCTGTTGGGCACA
--------------------GTGAAGCTGCCAGCATGATCTA 	1
---------------------TGAAGCTGCCAGCATGATCT 	9
---------------------TGAAGCTGCCAGCATGATCTAA 	1
---------------------TGAAGCTGCCAGCATGATCTA 	540
---------------------TGAAGCTGCCAGCATGATC 	2

Overlaps with: MNEST041952 MNEST048860
Overlaps with miRBase pre-miRNAs: osa-MIR167b
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
28	Oryza sativa	GSM520635-18669	TGAAGCTGCCAGCATGATCTA	GATCATGCATGACAGCCTCATT	up	2	1

Secondary structure

AGATGATGATGATGGTGCTAGTGTGAATGAGTGAAGCTGCCAGCATGATCTAGCTCTGATTAATCGGCACTGTTGGCGTACAGTCGATTGACTAATCGTCAGATCTGTGTGTGTAAATCACTGTTAGATCATGCATGACAGCCTCATTTCTTCACACTGTTGGGCATGTGTTAAAC
-------------------------------TGAAGCTGCCAGCATGATCTAGCT 	5
-------------------------------TGAAGCTGCCAGCATGATCT 	4
-------------------------------TGAAGCTGCCAGCATGATCTA 	221
-------------------------------TGAAGCTGCCAGCATGATCTAG 	2
--------------------------------GAAGCTGCCAGCATGATCTA 	1
---------------------------------AAGCTGCCAGCATGATCTA 	1
-----------------------------------------------------------------------------------------------------------------------------AGATCATGCATGACAGCCTCATT 	2
------------------------------------------------------------------------------------------------------------------------------GATCATGCATGACAGCCTCATT 	1

Overlaps with: MNEST041951 MNEST048858 MNEST048859
Overlaps with miRBase pre-miRNAs: osa-MIR167a
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
29	Oryza sativa	GSM520635-18669	TGAAGCTGCCAGCATGATCTA	GGTCATGCTGCGGCAGCCTCACT	up	1	2

Secondary structure

TGAACTGTCCAAGGGAACGAGTGAAGCTGCCAGCATGATCTAGCTCTGAATGATCAACAAGATGTGCTCCCACACTGCCTTCCTGTGGATCTTGAGCTGTTGCTAGTCTTGTGGTCATGCCTTGCTAGGTCATGCTGCGGCAGCCTCACTTCTTCCCATTGTTGGGCA
---------------AACGAGTGAAGCTGCCAGCATGA 	1
---------------------TGAAGCTGCCAGCATGATCTAGCT 	5
---------------------TGAAGCTGCCAGCATGATCT 	4
---------------------TGAAGCTGCCAGCATGATCTA 	221
---------------------TGAAGCTGCCAGCATGATCTAG 	2
----------------------GAAGCTGCCAGCATGATCTA 	1
-----------------------AAGCTGCCAGCATGATCTA 	1
-----------------------------------------------------------------------------------------------------------------------CCTTGCTAGGTCATGCTGCGGCAGC 	1

Overlaps with: MNEST041953 MNEST048861
Overlaps with miRBase pre-miRNAs: osa-MIR167c
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
30	Oryza sativa	GSM520635-18669	TGAAGCTGCCAGCATGATCTA	GATCATGCTGTGACAGTTTCACT	up	1	2

Secondary structure

TCCGGTGCCCAAGAGAAAGCGTGAAGCTGCCAGCATGATCTAACTTGCAGACAAGAAATCAGCTCAGCTCGCTGGTTTCGAACAGGAAGGCGGCTAGCTGAGGCTTCTTCTGAGTACGTGATGGTTAGATCATGCTGTGACAGTTTCACTCCTTCCCTGTTGGGCACA
---------------------TGAAGCTGCCAGCATGATCT 	4
---------------------TGAAGCTGCCAGCATGATCTAA 	1
---------------------TGAAGCTGCCAGCATGATCTAACTT 	1
---------------------TGAAGCTGCCAGCATGATCTA 	221
----------------------GAAGCTGCCAGCATGATCTA 	1
-----------------------AAGCTGCCAGCATGATCTA 	1
----------------------------------------------------------------------------------------------------------------------------TTAGATCATGCTGTGACAGTTTCACT 	2

Overlaps with: MNEST041952 MNEST048860
Overlaps with miRBase pre-miRNAs: osa-MIR167b
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
31	Oryza sativa	GSM520637-18674	TGAAGCTGCCAGCATGATCTA	GATCATGCATGACAGCCTCATT	up	2	1

Secondary structure

AGATGATGATGATGGTGCTAGTGTGAATGAGTGAAGCTGCCAGCATGATCTAGCTCTGATTAATCGGCACTGTTGGCGTACAGTCGATTGACTAATCGTCAGATCTGTGTGTGTAAATCACTGTTAGATCATGCATGACAGCCTCATTTCTTCACACTGTTGGGCATGTGTTAAAC
-------------------------------TGAAGCTGCCAGCATGATC 	17
-------------------------------TGAAGCTGCCAGCATGATCT 	91
-------------------------------TGAAGCTGCCAGCATGATCTA 	1917
-------------------------------TGAAGCTGCCAGCATGATCTAG 	13
--------------------------------GAAGCTGCCAGCATGATCTA 	2
--------------------------------GAAGCTGCCAGCATGATCT 	1
-------------------------------------TGCCAGCATGATCTAGCTCT 	2
-------------------------------------------------------------------------------------------------------------------------------ATCATGCATGACAGCCTCATT 	8
--------------------------------------------------------------------------------------------------------------------------------TCATGCATGACAGCCTCATT 	1

Overlaps with: MNEST041951 MNEST048858 MNEST048859
Overlaps with miRBase pre-miRNAs: osa-MIR167a
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
32	Oryza sativa	GSM520637-18674	TGAAGCTGCCAGCATGATCTA	GGTCATGCTGCGGCAGCCTCACT	up	1	2

Secondary structure

TGAACTGTCCAAGGGAACGAGTGAAGCTGCCAGCATGATCTAGCTCTGAATGATCAACAAGATGTGCTCCCACACTGCCTTCCTGTGGATCTTGAGCTGTTGCTAGTCTTGTGGTCATGCCTTGCTAGGTCATGCTGCGGCAGCCTCACTTCTTCCCATTGTTGGGCA
---------------------TGAAGCTGCCAGCATGATC 	17
---------------------TGAAGCTGCCAGCATGATCT 	91
---------------------TGAAGCTGCCAGCATGATCTA 	1917
---------------------TGAAGCTGCCAGCATGATCTAG 	13
----------------------GAAGCTGCCAGCATGATCTA 	2
----------------------GAAGCTGCCAGCATGATCT 	1
---------------------------TGCCAGCATGATCTAGCTCT 	2
----------------------------------------------------------------------------------------------------------TCTTGTGGTCATGCCTTGCTA 	1

Overlaps with: MNEST041953 MNEST048861
Overlaps with miRBase pre-miRNAs: osa-MIR167c
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
33	Oryza sativa	GSM520637-18674	TGAAGCTGCCAGCATGATCTA	GATCATGCTGTGACAGTTTCACT	up	1	2

Secondary structure

TCCGGTGCCCAAGAGAAAGCGTGAAGCTGCCAGCATGATCTAACTTGCAGACAAGAAATCAGCTCAGCTCGCTGGTTTCGAACAGGAAGGCGGCTAGCTGAGGCTTCTTCTGAGTACGTGATGGTTAGATCATGCTGTGACAGTTTCACTCCTTCCCTGTTGGGCACA
---------------------TGAAGCTGCCAGCATGATC 	17
---------------------TGAAGCTGCCAGCATGATCT 	91
---------------------TGAAGCTGCCAGCATGATCTAA 	14
---------------------TGAAGCTGCCAGCATGATCTA 	1917
----------------------GAAGCTGCCAGCATGATCTA 	2
----------------------GAAGCTGCCAGCATGATCT 	1

Overlaps with: MNEST041952 MNEST048860
Overlaps with miRBase pre-miRNAs: osa-MIR167b
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
34	Oryza sativa	GSM693279	TGAAGCTGCCAGCATGATCTA	GATCATGCATGACAGCCTCATT	up	2	1

Secondary structure

AGATGATGATGATGGTGCTAGTGTGAATGAGTGAAGCTGCCAGCATGATCTAGCTCTGATTAATCGGCACTGTTGGCGTACAGTCGATTGACTAATCGTCAGATCTGTGTGTGTAAATCACTGTTAGATCATGCATGACAGCCTCATTTCTTCACACTGTTGGGCATGTGTTAAAC
-------------------------------TGAAGCTGCCAGCATGATCTA 	5526
-------------------------------TGAAGCTGCCAGCATGATCT 	484
-------------------------------TGAAGCTGCCAGCATGATC 	108
-------------------------------TGAAGCTGCCAGCATGATCTAG 	8
--------------------------------GAAGCTGCCAGCATGATCTA 	47
--------------------------------GAAGCTGCCAGCATGATCT 	4
---------------------------------AAGCTGCCAGCATGATCTA 	9
-------------------------------------------------------------------------------------------------------------------------------ATCATGCATGACAGCCTCATT 	1
--------------------------------------------------------------------------------------------------------------------------------TCATGCATGACAGCCTCATT 	1

Overlaps with: MNEST041951 MNEST048858 MNEST048859
Overlaps with miRBase pre-miRNAs: osa-MIR167a
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
35	Oryza sativa	GSM693279	TGAAGCTGCCAGCATGATCTA	GGTCATGCTGCGGCAGCCTCACT	up	1	2

Secondary structure

TGAACTGTCCAAGGGAACGAGTGAAGCTGCCAGCATGATCTAGCTCTGAATGATCAACAAGATGTGCTCCCACACTGCCTTCCTGTGGATCTTGAGCTGTTGCTAGTCTTGTGGTCATGCCTTGCTAGGTCATGCTGCGGCAGCCTCACTTCTTCCCATTGTTGGGCA
---------------------TGAAGCTGCCAGCATGATCTA 	5526
---------------------TGAAGCTGCCAGCATGATCT 	484
---------------------TGAAGCTGCCAGCATGATC 	108
---------------------TGAAGCTGCCAGCATGATCTAG 	8
----------------------GAAGCTGCCAGCATGATCTA 	47
----------------------GAAGCTGCCAGCATGATCT 	4
-----------------------AAGCTGCCAGCATGATCTA 	9
-------------------------------------------------------------------------------------------------------------------------------GGTCATGCTGCGGCAGCCTCACT 	7

Overlaps with: MNEST041953 MNEST048861
Overlaps with miRBase pre-miRNAs: osa-MIR167c
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
36	Oryza sativa	GSM693279	TGAAGCTGCCAGCATGATCTA	GATCATGCTGTGACAGTTTCACT	up	1	2

Secondary structure

TCCGGTGCCCAAGAGAAAGCGTGAAGCTGCCAGCATGATCTAACTTGCAGACAAGAAATCAGCTCAGCTCGCTGGTTTCGAACAGGAAGGCGGCTAGCTGAGGCTTCTTCTGAGTACGTGATGGTTAGATCATGCTGTGACAGTTTCACTCCTTCCCTGTTGGGCACA
---------------------TGAAGCTGCCAGCATGATCTA 	5526
---------------------TGAAGCTGCCAGCATGATCT 	484
---------------------TGAAGCTGCCAGCATGATC 	108
---------------------TGAAGCTGCCAGCATGATCTAA 	4
----------------------GAAGCTGCCAGCATGATCTA 	47
----------------------GAAGCTGCCAGCATGATCT 	4
-----------------------AAGCTGCCAGCATGATCTA 	9
--------------------------------------------------------------------------------------------------------------------------------ATCATGCTGTGACAGTTTCACT 	3

Overlaps with: MNEST041952 MNEST048860
Overlaps with miRBase pre-miRNAs: osa-MIR167b
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
37	Oryza sativa	GSM520639-18678	TGAAGCTGCCAGCATGATCTA	GATCATGCATGACAGCCTCATT	up	2	1

Secondary structure

AGATGATGATGATGGTGCTAGTGTGAATGAGTGAAGCTGCCAGCATGATCTAGCTCTGATTAATCGGCACTGTTGGCGTACAGTCGATTGACTAATCGTCAGATCTGTGTGTGTAAATCACTGTTAGATCATGCATGACAGCCTCATTTCTTCACACTGTTGGGCATGTGTTAAAC
-------------------------------TGAAGCTGCCAGCATGATCTAG 	19
-------------------------------TGAAGCTGCCAGCATGATC 	19
-------------------------------TGAAGCTGCCAGCATGATCT 	272
-------------------------------TGAAGCTGCCAGCATGATCTA 	4893
--------------------------------GAAGCTGCCAGCATGATCTA 	2
---------------------------------AAGCTGCCAGCATGATCTA 	2
------------------------------------------------------------------------------------------------------------------------------GATCATGCATGACAGCCTCATT 	2

Overlaps with: MNEST041951 MNEST048858 MNEST048859
Overlaps with miRBase pre-miRNAs: osa-MIR167a
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
38	Oryza sativa	GSM520639-18678	TGAAGCTGCCAGCATGATCTA	GGTCATGCTGCGGCAGCCTCACT	up	1	2

Secondary structure

TGAACTGTCCAAGGGAACGAGTGAAGCTGCCAGCATGATCTAGCTCTGAATGATCAACAAGATGTGCTCCCACACTGCCTTCCTGTGGATCTTGAGCTGTTGCTAGTCTTGTGGTCATGCCTTGCTAGGTCATGCTGCGGCAGCCTCACTTCTTCCCATTGTTGGGCA
---------------------TGAAGCTGCCAGCATGATCTAG 	19
---------------------TGAAGCTGCCAGCATGATC 	19
---------------------TGAAGCTGCCAGCATGATCT 	272
---------------------TGAAGCTGCCAGCATGATCTA 	4893
----------------------GAAGCTGCCAGCATGATCTA 	2
-----------------------AAGCTGCCAGCATGATCTA 	2
----------------------------------------------------------------------------------------------------------TCTTGTGGTCATGCCTTGCTA 	7

Overlaps with: MNEST041953 MNEST048861
Overlaps with miRBase pre-miRNAs: osa-MIR167c
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
39	Oryza sativa	GSM520639-18678	TGAAGCTGCCAGCATGATCTA	GATCATGCTGTGACAGTTTCACT	up	1	2

Secondary structure

TCCGGTGCCCAAGAGAAAGCGTGAAGCTGCCAGCATGATCTAACTTGCAGACAAGAAATCAGCTCAGCTCGCTGGTTTCGAACAGGAAGGCGGCTAGCTGAGGCTTCTTCTGAGTACGTGATGGTTAGATCATGCTGTGACAGTTTCACTCCTTCCCTGTTGGGCACA
---------------------TGAAGCTGCCAGCATGATC 	19
---------------------TGAAGCTGCCAGCATGATCTAACT 	3
---------------------TGAAGCTGCCAGCATGATCTAA 	90
---------------------TGAAGCTGCCAGCATGATCT 	272
---------------------TGAAGCTGCCAGCATGATCTA 	4893
----------------------GAAGCTGCCAGCATGATCTA 	2
----------------------GAAGCTGCCAGCATGATCTAA 	1
-----------------------AAGCTGCCAGCATGATCTA 	2
------------------------AGCTGCCAGCATGATCTAA 	1
-------------------------------------------------------------------------------------------------------------------------------GATCATGCTGTGACAGTTTCACT 	3
--------------------------------------------------------------------------------------------------------------------------------ATCATGCTGTGACAGTTTCACT 	16

Overlaps with: MNEST041952 MNEST048860
Overlaps with miRBase pre-miRNAs: osa-MIR167b
HuntMi prediction: true miRNA