miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: deep sequencing predictions



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selected mature miRNA sequence: TGAAGCTGCCAGCATGATCTG

selected species: Oryza sativa



85 records found  

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#specieslibrarymiRNAmiRNA*armmismatchesbulges
1 Oryza sativa GSM693280 TGAAGCTGCCAGCATGATCTGA AGATCATCTGGCAGTTTCATC up 0 1


Secondary structure

TCTCTCATATGTATGGTGCACCACAAGTGGATGAAGCTGCCAGCATGATCTGATCACAGTAGTTCTCTAGCTGATGATGATTTACAAAACCTAGAGACATGCATCAGATCATCTGGCAGTTTCATCTTCTCATGGCAGCACAAAAAGAGCTTAC
-------------------------------TGAAGCTGCCAGCATGATCTGA 	2267
-------------------------------TGAAGCTGCCAGCATGATCTG 	347
-------------------------------TGAAGCTGCCAGCATGATCT 	74
-------------------------------TGAAGCTGCCAGCATGATC 	10
-------------------------------TGAAGCTGCCAGCATGATCTGAT 	3
--------------------------------GAAGCTGCCAGCATGATCTGA 	6
--------------------------------GAAGCTGCCAGCATGATCTG 	1
---------------------------------AAGCTGCCAGCATGATCTGAT 	1

Overlaps with: MNEST041956 MNEST048864
Overlaps with miRBase pre-miRNAs: osa-MIR167f
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
2 Oryza sativa GSM693280 TGAAGCTGCCAGCATGATCTGA AGGTCATGCTGTAGTTTCATC up 0 1


Secondary structure

TAACTAAGGGCAGTGGTGCACCACAAGTTGGTGAAGCTGCCAGCATGATCTGATGATGATGATGATCCACCTCTCTCATCTGTGTTCTTGATTAATTACGGATCAATCGATCAGGTCATGCTGTAGTTTCATCTGCTGGTTGGGAGCACAGCAAAAAAAAA
-------------------------------TGAAGCTGCCAGCATGATCTGA 	2267
-------------------------------TGAAGCTGCCAGCATGATCTG 	347
-------------------------------TGAAGCTGCCAGCATGATCT 	74
-------------------------------TGAAGCTGCCAGCATGATC 	10
-------------------------------TGAAGCTGCCAGCATGATCTGAT 	3
-------------------------------TGAAGCTGCCAGCATGATCTGATG 	1
--------------------------------GAAGCTGCCAGCATGATCTGA 	6
--------------------------------GAAGCTGCCAGCATGATCTG 	1
---------------------------------AAGCTGCCAGCATGATCTGAT 	1


HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
3 Oryza sativa GSM693280 TGAAGCTGCCAGCATGATCTGA AGATCATGCTGTGCAGTTTCATC up 0 1


Secondary structure

CCTTGATTGTTGAGGTGCAACCATTAGGAGCTGAAGCTGCCAGCATGATCTGATGAGTGCTTATTAGGTGAGGGCAGAATTGACTGCCAAAACAAAGATCAGATCATGCTGTGCAGTTTCATCTGCTTGTGGCTGCACAAAATTAAAGGGC
-------------------------------TGAAGCTGCCAGCATGATCTGA 	2267
-------------------------------TGAAGCTGCCAGCATGATCTG 	347
-------------------------------TGAAGCTGCCAGCATGATCT 	74
-------------------------------TGAAGCTGCCAGCATGATC 	10
-------------------------------TGAAGCTGCCAGCATGATCTGAT 	3
-------------------------------TGAAGCTGCCAGCATGATCTGATG 	1
--------------------------------GAAGCTGCCAGCATGATCTGA 	6
--------------------------------GAAGCTGCCAGCATGATCTG 	1
---------------------------------AAGCTGCCAGCATGATCTGAT 	1

Overlaps with: MNEST050424
Overlaps with miRBase pre-miRNAs: osa-MIR167d
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
4 Oryza sativa GSM693280 TGAAGCTGCCAGCATGATCTG GATCATGTTGCAGCTTCACT up 0 1


Secondary structure

GTTCTTGCTGGTGTGAGAGGCTGAAGCTGCCAGCATGATCTGGTCCATGAGTTGCACTGCTGAATATATTGAATTCAGCCAGGAGCTGCTACTGCAGTTCTGATCTCGATCTGCATTCGTTGTTCTGAGCTATGTATGGATTTGATCGGTTTGAAGGCATCCATGTCTTTAATTTCATCGATCAGATCATGTTGCAGCTTCACTCTCTCACTACCAGCAAAA
---------------------TGAAGCTGCCAGCATGATCTG 	347
---------------------TGAAGCTGCCAGCATGATCT 	74
---------------------TGAAGCTGCCAGCATGATCTGG 	53
---------------------TGAAGCTGCCAGCATGATC 	10
----------------------GAAGCTGCCAGCATGATCTG 	1
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGATCATGTTGCAGCTTCAC 	7
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATCATGTTGCAGCTTCACT 	162
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATCATGTTGCAGCTTCAC 	4
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATCATGTTGCAGCTTCACT 	2

Overlaps with: MNEST041959 MNEST048867
Overlaps with miRBase pre-miRNAs: osa-MIR167i
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
5 Oryza sativa GSM693280 TGAAGCTGCCAGCATGATCTG GATCATGTTGCAGCTTCACT up 0 1


Secondary structure

AGTTTTGCTGGTGTGAGAGAATGAAGCTGCCAGCATGATCTGGTTGTCAGGCATGAGCCAAATCTATCCATGGTGTTGGTGGTACTGAAATTACCGCGTTTTCGAGGTTTTTCGTCGTGTCAACTTGCGAAGGGAATTACGGGTTCTTGATGAGCATTGGTGATAGGAGGTGTGGGCTTGGTTAGTAGAGGTAGAATTATGATTGTTCTTGTGAGTTTCAGTAAGAGGTGGGAGTGATTGGAATTTGGCTCCATCAGATCATGTTGCAGCTTCACTCTCTCACCACCAACAA
--------TGGTGTGAGAGAATGAAGCTG 	2
-----------TGTGAGAGAATGAAGCTGCC 	2
-----------TGTGAGAGAATGAAGCTGC 	2
-------------TGAGAGAATGAAGCTGCCAG 	1
---------------AGAGAATGAAGCTGCCAGCATG 	1
---------------AGAGAATGAAGCTGCCAGCATGATC 	1
-------------------AATGAAGCTGCCAGCATGATCT 	2
---------------------TGAAGCTGCCAGCATGATCTG 	347
---------------------TGAAGCTGCCAGCATGATCT 	74
---------------------TGAAGCTGCCAGCATGATCTGG 	53
---------------------TGAAGCTGCCAGCATGATC 	10
----------------------GAAGCTGCCAGCATGATCTG 	1
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGATCATGTTGCAGCTTCAC 	7
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATCATGTTGCAGCTTCACT 	162
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATCATGTTGCAGCTTCAC 	4
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATCATGTTGCAGCTTCACT 	2

Overlaps with: MNEST041955 MNEST048863
Overlaps with miRBase pre-miRNAs: osa-MIR167e
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
6 Oryza sativa GSM693280 TGAAGCTGCCAGCATGATCTGA AGATCATCCGGCAGCTTCATC up 2 1


Secondary structure

GATGGGCTGTTAATTCGCTTTGTTTGTGCGCCATAAGCAGGTGAAGCTGCCAGCATGATCTGAAAGCATCTCAAACCAGCGATCAGATCATCCGGCAGCTTCATCTTCTCATGGCAGCACACCAGCTTGATTGATTGATGATG
-----------------------------------------TGAAGCTGCCAGCATGATCTGA 	2267
-----------------------------------------TGAAGCTGCCAGCATGATCTG 	347
-----------------------------------------TGAAGCTGCCAGCATGATCT 	74
-----------------------------------------TGAAGCTGCCAGCATGATCTGAA 	11
-----------------------------------------TGAAGCTGCCAGCATGATC 	10
-----------------------------------------TGAAGCTGCCAGCATGATCTGAAA 	1
------------------------------------------GAAGCTGCCAGCATGATCTGA 	6
------------------------------------------GAAGCTGCCAGCATGATCTG 	1
-------------------------------------------AAGCTGCCAGCATGATCTGAAAGCA 	1
---------------------------------------------------------------------------------------TCATCCGGCAGCTTCATCTTC 	10

Overlaps with: MNEST041957 MNEST048865
Overlaps with miRBase pre-miRNAs: osa-MIR167g
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
7 Oryza sativa GSM693280 TGAAGCTGCCAGCATGATCTGA AGATCGTGCTGCGCAGTTTCATC up 0 1


Secondary structure

GATGTGTGCACCTTAAGCAGCTGAAGCTGCCAGCATGATCTGATCTTTTGCGATCTCTTTTTTTATCTGAATAAGTTGATGGAAATATTGGGTTCCTAAGATTCAGATCGTGCTGCGCAGTTTCATCTGCTAATCGATGCACTAC
---------------------TGAAGCTGCCAGCATGATCTGA 	2267
---------------------TGAAGCTGCCAGCATGATCTG 	347
---------------------TGAAGCTGCCAGCATGATCT 	74
---------------------TGAAGCTGCCAGCATGATC 	10
---------------------TGAAGCTGCCAGCATGATCTGAT 	3
----------------------GAAGCTGCCAGCATGATCTGA 	6
----------------------GAAGCTGCCAGCATGATCTG 	1
-----------------------AAGCTGCCAGCATGATCTGAT 	1
--------------------------------------------------------------------------------------------------------AGATCGTGCTGCGCAGTTTCA 	4
--------------------------------------------------------------------------------------------------------AGATCGTGCTGCGCAGTTTCATC 	1
---------------------------------------------------------------------------------------------------------GATCGTGCTGCGCAGTTTCA 	1
---------------------------------------------------------------------------------------------------------GATCGTGCTGCGCAGTTTCATC 	1


HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
8 Oryza sativa GSM571078-22531 TGAAGCTGCCAGCATGATCTGA AGATCATCTGGCAGTTTCATC up 0 1


Secondary structure

TCTCTCATATGTATGGTGCACCACAAGTGGATGAAGCTGCCAGCATGATCTGATCACAGTAGTTCTCTAGCTGATGATGATTTACAAAACCTAGAGACATGCATCAGATCATCTGGCAGTTTCATCTTCTCATGGCAGCACAAAAAGAGCTTAC
------------------------------ATGAAGCTGCCAGCATGATCTGA 	1
-------------------------------TGAAGCTGCCAGCATGATCTGAT 	36
-------------------------------TGAAGCTGCCAGCATGATCTGA 	27495
-------------------------------TGAAGCTGCCAGCATGATCTG 	3425
-------------------------------TGAAGCTGCCAGCATGATCT 	350
-------------------------------TGAAGCTGCCAGCATGATC 	124
--------------------------------GAAGCTGCCAGCATGATCTGA 	538
--------------------------------GAAGCTGCCAGCATGATCT 	9
--------------------------------GAAGCTGCCAGCATGATCTG 	7
--------------------------------GAAGCTGCCAGCATGATCTGAT 	1
---------------------------------AAGCTGCCAGCATGATCTGA 	64
---------------------------------AAGCTGCCAGCATGATCTG 	5
---------------------------------AAGCTGCCAGCATGATCTGAT 	1
----------------------------------AGCTGCCAGCATGATCTGA 	1
-------------------------------------------------------------------------------------------------------TCAGATCATCTGGCAGTTTCA 	1
---------------------------------------------------------------------------------------------------------AGATCATCTGGCAGTTTCATC 	5

Overlaps with: MNEST041956 MNEST048864
Overlaps with miRBase pre-miRNAs: osa-MIR167f
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
9 Oryza sativa GSM571078-22531 TGAAGCTGCCAGCATGATCTGA AGGTCATGCTGTAGTTTCATC up 0 1


Secondary structure

TAACTAAGGGCAGTGGTGCACCACAAGTTGGTGAAGCTGCCAGCATGATCTGATGATGATGATGATCCACCTCTCTCATCTGTGTTCTTGATTAATTACGGATCAATCGATCAGGTCATGCTGTAGTTTCATCTGCTGGTTGGGAGCACAGCAAAAAAAAA
----------------------------TGGTGAAGCTGCCAGCATGATCTGA 	1
-------------------------------TGAAGCTGCCAGCATGATCTGAT 	36
-------------------------------TGAAGCTGCCAGCATGATCTGA 	27495
-------------------------------TGAAGCTGCCAGCATGATCTG 	3425
-------------------------------TGAAGCTGCCAGCATGATCT 	350
-------------------------------TGAAGCTGCCAGCATGATC 	124
-------------------------------TGAAGCTGCCAGCATGATCTGATG 	2
--------------------------------GAAGCTGCCAGCATGATCTGA 	538
--------------------------------GAAGCTGCCAGCATGATCT 	9
--------------------------------GAAGCTGCCAGCATGATCTG 	7
--------------------------------GAAGCTGCCAGCATGATCTGAT 	1
---------------------------------AAGCTGCCAGCATGATCTGA 	64
---------------------------------AAGCTGCCAGCATGATCTG 	5
---------------------------------AAGCTGCCAGCATGATCTGAT 	1
----------------------------------AGCTGCCAGCATGATCTGA 	1
----------------------------------------------------------------------------------------------------------------AGGTCATGCTGTAGTTTCATC 	2
----------------------------------------------------------------------------------------------------------------AGGTCATGCTGTAGTTTCA 	1


HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
10 Oryza sativa GSM571078-22531 TGAAGCTGCCAGCATGATCTGA AGATCATGCTGTGCAGTTTCATC up 0 1


Secondary structure

CCTTGATTGTTGAGGTGCAACCATTAGGAGCTGAAGCTGCCAGCATGATCTGATGAGTGCTTATTAGGTGAGGGCAGAATTGACTGCCAAAACAAAGATCAGATCATGCTGTGCAGTTTCATCTGCTTGTGGCTGCACAAAATTAAAGGGC
------------------------------CTGAAGCTGCCAGCATGATCTGA 	41
------------------------------CTGAAGCTGCCAGCATGATCTG 	13
-------------------------------TGAAGCTGCCAGCATGATCTGAT 	36
-------------------------------TGAAGCTGCCAGCATGATCTGA 	27495
-------------------------------TGAAGCTGCCAGCATGATCTG 	3425
-------------------------------TGAAGCTGCCAGCATGATCT 	350
-------------------------------TGAAGCTGCCAGCATGATC 	124
-------------------------------TGAAGCTGCCAGCATGATCTGATG 	2
--------------------------------GAAGCTGCCAGCATGATCTGA 	538
--------------------------------GAAGCTGCCAGCATGATCT 	9
--------------------------------GAAGCTGCCAGCATGATCTG 	7
--------------------------------GAAGCTGCCAGCATGATCTGAT 	1
---------------------------------AAGCTGCCAGCATGATCTGA 	64
---------------------------------AAGCTGCCAGCATGATCTG 	5
---------------------------------AAGCTGCCAGCATGATCTGAT 	1
----------------------------------AGCTGCCAGCATGATCTGA 	1
-----------------------------------------------------------------------------------------------------GATCATGCTGTGCAGTTTCATC 	1

Overlaps with: MNEST050424
Overlaps with miRBase pre-miRNAs: osa-MIR167d
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
11 Oryza sativa GSM571078-22531 TGAAGCTGCCAGCATGATCTG GATCATGTTGCAGCTTCACT up 0 1


Secondary structure

GTTCTTGCTGGTGTGAGAGGCTGAAGCTGCCAGCATGATCTGGTCCATGAGTTGCACTGCTGAATATATTGAATTCAGCCAGGAGCTGCTACTGCAGTTCTGATCTCGATCTGCATTCGTTGTTCTGAGCTATGTATGGATTTGATCGGTTTGAAGGCATCCATGTCTTTAATTTCATCGATCAGATCATGTTGCAGCTTCACTCTCTCACTACCAGCAAAA
--------------------CTGAAGCTGCCAGCATGATCTG 	13
--------------------CTGAAGCTGCCAGCATGATCTGG 	1
---------------------TGAAGCTGCCAGCATGATCTGG 	147
---------------------TGAAGCTGCCAGCATGATCTG 	3425
---------------------TGAAGCTGCCAGCATGATCT 	350
---------------------TGAAGCTGCCAGCATGATC 	124
----------------------GAAGCTGCCAGCATGATCT 	9
----------------------GAAGCTGCCAGCATGATCTG 	7
----------------------GAAGCTGCCAGCATGATCTGG 	2
-----------------------AAGCTGCCAGCATGATCTG 	5
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGATCATGTTGCAGCTTCAC 	1
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATCATGTTGCAGCTTCACT 	48
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATCATGTTGCAGCTTCAC 	5
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATCATGTTGCAGCTTCACT 	1
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCATGTTGCAGCTTCACT 	1

Overlaps with: MNEST041959 MNEST048867
Overlaps with miRBase pre-miRNAs: osa-MIR167i
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
12 Oryza sativa GSM571078-22531 TGAAGCTGCCAGCATGATCTG GATCATGTTGCAGCTTCACT up 0 1


Secondary structure

AGTTTTGCTGGTGTGAGAGAATGAAGCTGCCAGCATGATCTGGTTGTCAGGCATGAGCCAAATCTATCCATGGTGTTGGTGGTACTGAAATTACCGCGTTTTCGAGGTTTTTCGTCGTGTCAACTTGCGAAGGGAATTACGGGTTCTTGATGAGCATTGGTGATAGGAGGTGTGGGCTTGGTTAGTAGAGGTAGAATTATGATTGTTCTTGTGAGTTTCAGTAAGAGGTGGGAGTGATTGGAATTTGGCTCCATCAGATCATGTTGCAGCTTCACTCTCTCACCACCAACAA
-------------TGAGAGAATGAAGCTGCCAGC 	1
---------------------TGAAGCTGCCAGCATGATCTGG 	147
---------------------TGAAGCTGCCAGCATGATCTG 	3425
---------------------TGAAGCTGCCAGCATGATCT 	350
---------------------TGAAGCTGCCAGCATGATC 	124
----------------------GAAGCTGCCAGCATGATCT 	9
----------------------GAAGCTGCCAGCATGATCTG 	7
----------------------GAAGCTGCCAGCATGATCTGG 	2
-----------------------AAGCTGCCAGCATGATCTG 	5
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGATCATGTTGCAGCTTCAC 	1
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATCATGTTGCAGCTTCACT 	48
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATCATGTTGCAGCTTCAC 	5
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATCATGTTGCAGCTTCACT 	1
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCATGTTGCAGCTTCACT 	1

Overlaps with: MNEST041955 MNEST048863
Overlaps with miRBase pre-miRNAs: osa-MIR167e
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
13 Oryza sativa GSM571078-22531 TGAAGCTGCCAGCATGATCTGA AGATCATCCGGCAGCTTCATC up 2 1


Secondary structure

GATGGGCTGTTAATTCGCTTTGTTTGTGCGCCATAAGCAGGTGAAGCTGCCAGCATGATCTGAAAGCATCTCAAACCAGCGATCAGATCATCCGGCAGCTTCATCTTCTCATGGCAGCACACCAGCTTGATTGATTGATGATG
--------------------------------------AGGTGAAGCTGCCAGCATGATC 	1
-----------------------------------------TGAAGCTGCCAGCATGATCTGAAA 	106
-----------------------------------------TGAAGCTGCCAGCATGATCTGAA 	328
-----------------------------------------TGAAGCTGCCAGCATGATCTGA 	27495
-----------------------------------------TGAAGCTGCCAGCATGATCTG 	3425
-----------------------------------------TGAAGCTGCCAGCATGATCT 	350
-----------------------------------------TGAAGCTGCCAGCATGATC 	124
-----------------------------------------TGAAGCTGCCAGCATGATCTGAAAG 	1
------------------------------------------GAAGCTGCCAGCATGATCTGA 	538
------------------------------------------GAAGCTGCCAGCATGATCT 	9
------------------------------------------GAAGCTGCCAGCATGATCTGAA 	6
------------------------------------------GAAGCTGCCAGCATGATCTG 	7
-------------------------------------------AAGCTGCCAGCATGATCTGA 	64
-------------------------------------------AAGCTGCCAGCATGATCTG 	5
-------------------------------------------AAGCTGCCAGCATGATCTGAAA 	1
--------------------------------------------AGCTGCCAGCATGATCTGA 	1
------------------------------------------------------------------------------------AGATCATCCGGCAGCTTCATC 	7
-------------------------------------------------------------------------------------GATCATCCGGCAGCTTCATC 	1
---------------------------------------------------------------------------------------TCATCCGGCAGCTTCATCTTC 	31
---------------------------------------------------------------------------------------TCATCCGGCAGCTTCATCTTCT 	1
---------------------------------------------------------------------------------------TCATCCGGCAGCTTCATCT 	1
-----------------------------------------------------------------------------------------ATCCGGCAGCTTCATCTTCTCA 	1

Overlaps with: MNEST041957 MNEST048865
Overlaps with miRBase pre-miRNAs: osa-MIR167g
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
14 Oryza sativa GSM571078-22531 TGAAGCTGCCAGCATGATCTGA AGATCGTGCTGCGCAGTTTCATC up 0 1


Secondary structure

GATGTGTGCACCTTAAGCAGCTGAAGCTGCCAGCATGATCTGATCTTTTGCGATCTCTTTTTTTATCTGAATAAGTTGATGGAAATATTGGGTTCCTAAGATTCAGATCGTGCTGCGCAGTTTCATCTGCTAATCGATGCACTAC
--------------------CTGAAGCTGCCAGCATGATCTGA 	41
--------------------CTGAAGCTGCCAGCATGATCTG 	13
---------------------TGAAGCTGCCAGCATGATCTGAT 	36
---------------------TGAAGCTGCCAGCATGATCTGA 	27495
---------------------TGAAGCTGCCAGCATGATCTG 	3425
---------------------TGAAGCTGCCAGCATGATCT 	350
---------------------TGAAGCTGCCAGCATGATC 	124
----------------------GAAGCTGCCAGCATGATCTGA 	538
----------------------GAAGCTGCCAGCATGATCT 	9
----------------------GAAGCTGCCAGCATGATCTG 	7
----------------------GAAGCTGCCAGCATGATCTGAT 	1
-----------------------AAGCTGCCAGCATGATCTGA 	64
-----------------------AAGCTGCCAGCATGATCTG 	5
-----------------------AAGCTGCCAGCATGATCTGAT 	1
------------------------AGCTGCCAGCATGATCTGA 	1
--------------------------------------------------------------------------------------------------------AGATCGTGCTGCGCAGTTTCATC 	2
--------------------------------------------------------------------------------------------------------AGATCGTGCTGCGCAGTTTCA 	1
---------------------------------------------------------------------------------------------------------GATCGTGCTGCGCAGTTTCATC 	4


HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
15 Oryza sativa GSM520638-18676 TGAAGCTGCCAGCATGATCTGA AGATCATCTGGCAGTTTCATC up 0 1


Secondary structure

TCTCTCATATGTATGGTGCACCACAAGTGGATGAAGCTGCCAGCATGATCTGATCACAGTAGTTCTCTAGCTGATGATGATTTACAAAACCTAGAGACATGCATCAGATCATCTGGCAGTTTCATCTTCTCATGGCAGCACAAAAAGAGCTTAC
----------------------------GGATGAAGCTGCCAGCATGATCTGA 	1
-----------------------------GATGAAGCTGCCAGCATGATCT 	1
-----------------------------GATGAAGCTGCCAGCATGATCTGA 	4
------------------------------ATGAAGCTGCCAGCATGATCTGA 	98
------------------------------ATGAAGCTGCCAGCATGATCTG 	8
------------------------------ATGAAGCTGCCAGCATGATCT 	13
-------------------------------TGAAGCTGCCAGCATGATCT 	428
-------------------------------TGAAGCTGCCAGCATGATCTG 	671
-------------------------------TGAAGCTGCCAGCATGATCTGAT 	23
-------------------------------TGAAGCTGCCAGCATGATCTGA 	102640
-------------------------------TGAAGCTGCCAGCATGATC 	77
--------------------------------GAAGCTGCCAGCATGATCTGAT 	2
--------------------------------GAAGCTGCCAGCATGATCTG 	5
--------------------------------GAAGCTGCCAGCATGATCTGA 	84
---------------------------------AAGCTGCCAGCATGATCTGA 	51
---------------------------------AAGCTGCCAGCATGATCTG 	2
----------------------------------AGCTGCCAGCATGATCTGA 	126
-------------------------------------------------------------------------------------------------------TCAGATCATCTGGCAGTTTCA 	1
---------------------------------------------------------------------------------------------------------AGATCATCTGGCAGTTTCATC 	9

Overlaps with: MNEST041956 MNEST048864
Overlaps with miRBase pre-miRNAs: osa-MIR167f
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
16 Oryza sativa GSM520638-18676 TGAAGCTGCCAGCATGATCTGA AGGTCATGCTGTAGTTTCATC up 0 1


Secondary structure

TAACTAAGGGCAGTGGTGCACCACAAGTTGGTGAAGCTGCCAGCATGATCTGATGATGATGATGATCCACCTCTCTCATCTGTGTTCTTGATTAATTACGGATCAATCGATCAGGTCATGCTGTAGTTTCATCTGCTGGTTGGGAGCACAGCAAAAAAAAA
------------------------------GTGAAGCTGCCAGCATGATCTG 	2
------------------------------GTGAAGCTGCCAGCATGATCTGA 	2
-------------------------------TGAAGCTGCCAGCATGATCT 	428
-------------------------------TGAAGCTGCCAGCATGATCTG 	671
-------------------------------TGAAGCTGCCAGCATGATCTGATG 	1
-------------------------------TGAAGCTGCCAGCATGATCTGAT 	23
-------------------------------TGAAGCTGCCAGCATGATCTGA 	102640
-------------------------------TGAAGCTGCCAGCATGATC 	77
--------------------------------GAAGCTGCCAGCATGATCTGAT 	2
--------------------------------GAAGCTGCCAGCATGATCTG 	5
--------------------------------GAAGCTGCCAGCATGATCTGA 	84
---------------------------------AAGCTGCCAGCATGATCTGA 	51
---------------------------------AAGCTGCCAGCATGATCTG 	2
----------------------------------AGCTGCCAGCATGATCTGA 	126
--------------------------------------------------------------------------------------------------------------TCAGGTCATGCTGTAGTTTCA 	2
----------------------------------------------------------------------------------------------------------------AGGTCATGCTGTAGTTTCA 	3
----------------------------------------------------------------------------------------------------------------AGGTCATGCTGTAGTTTCAT 	2
----------------------------------------------------------------------------------------------------------------AGGTCATGCTGTAGTTTCATC 	202
----------------------------------------------------------------------------------------------------------------AGGTCATGCTGTAGTTTCATCT 	1
-----------------------------------------------------------------------------------------------------------------GGTCATGCTGTAGTTTCATC 	2


HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
17 Oryza sativa GSM520638-18676 TGAAGCTGCCAGCATGATCTGA AGATCATGCTGTGCAGTTTCATC up 0 1


Secondary structure

CCTTGATTGTTGAGGTGCAACCATTAGGAGCTGAAGCTGCCAGCATGATCTGATGAGTGCTTATTAGGTGAGGGCAGAATTGACTGCCAAAACAAAGATCAGATCATGCTGTGCAGTTTCATCTGCTTGTGGCTGCACAAAATTAAAGGGC
-----------------------------GCTGAAGCTGCCAGCATGATCTGA 	2
------------------------------CTGAAGCTGCCAGCATGATCTG 	1
------------------------------CTGAAGCTGCCAGCATGATCTGA 	51
------------------------------CTGAAGCTGCCAGCATGATCT 	2
-------------------------------TGAAGCTGCCAGCATGATCT 	428
-------------------------------TGAAGCTGCCAGCATGATCTG 	671
-------------------------------TGAAGCTGCCAGCATGATCTGATG 	1
-------------------------------TGAAGCTGCCAGCATGATCTGAT 	23
-------------------------------TGAAGCTGCCAGCATGATCTGA 	102640
-------------------------------TGAAGCTGCCAGCATGATC 	77
--------------------------------GAAGCTGCCAGCATGATCTGAT 	2
--------------------------------GAAGCTGCCAGCATGATCTG 	5
--------------------------------GAAGCTGCCAGCATGATCTGA 	84
---------------------------------AAGCTGCCAGCATGATCTGA 	51
---------------------------------AAGCTGCCAGCATGATCTG 	2
----------------------------------AGCTGCCAGCATGATCTGA 	126
-----------------------------------------------------------------------------------------------------GATCATGCTGTGCAGTTTCATC 	11

Overlaps with: MNEST050424
Overlaps with miRBase pre-miRNAs: osa-MIR167d
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
18 Oryza sativa GSM520638-18676 TGAAGCTGCCAGCATGATCTGG AGATCATGTTGCAGCTTCACT up 0 1


Secondary structure

GTTCTTGCTGGTGTGAGAGGCTGAAGCTGCCAGCATGATCTGGTCCATGAGTTGCACTGCTGAATATATTGAATTCAGCCAGGAGCTGCTACTGCAGTTCTGATCTCGATCTGCATTCGTTGTTCTGAGCTATGTATGGATTTGATCGGTTTGAAGGCATCCATGTCTTTAATTTCATCGATCAGATCATGTTGCAGCTTCACTCTCTCACTACCAGCAAAA
--------------------CTGAAGCTGCCAGCATGATCTGG 	1
--------------------CTGAAGCTGCCAGCATGATCTG 	1
--------------------CTGAAGCTGCCAGCATGATCT 	2
---------------------TGAAGCTGCCAGCATGATCTGG 	1518
---------------------TGAAGCTGCCAGCATGATCT 	428
---------------------TGAAGCTGCCAGCATGATCTG 	671
---------------------TGAAGCTGCCAGCATGATCTGGT 	2
---------------------TGAAGCTGCCAGCATGATC 	77
----------------------GAAGCTGCCAGCATGATCTGG 	10
----------------------GAAGCTGCCAGCATGATCTG 	5
-----------------------AAGCTGCCAGCATGATCTGG 	1
-----------------------AAGCTGCCAGCATGATCTG 	2
------------------------AGCTGCCAGCATGATCTGG 	1
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCAGATCATGTTGCAGCTTCA 	3
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGATCATGTTGCAGCTTCAC 	1
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATCATGTTGCAGCTTCA 	1
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATCATGTTGCAGCTTCACT 	31
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCATGTTGCAGCTTCACTCTC 	3

Overlaps with: MNEST041959 MNEST048867
Overlaps with miRBase pre-miRNAs: osa-MIR167i
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
19 Oryza sativa GSM520638-18676 TGAAGCTGCCAGCATGATCTGG AGATCATGTTGCAGCTTCACT up 0 1


Secondary structure

AGTTTTGCTGGTGTGAGAGAATGAAGCTGCCAGCATGATCTGGTTGTCAGGCATGAGCCAAATCTATCCATGGTGTTGGTGGTACTGAAATTACCGCGTTTTCGAGGTTTTTCGTCGTGTCAACTTGCGAAGGGAATTACGGGTTCTTGATGAGCATTGGTGATAGGAGGTGTGGGCTTGGTTAGTAGAGGTAGAATTATGATTGTTCTTGTGAGTTTCAGTAAGAGGTGGGAGTGATTGGAATTTGGCTCCATCAGATCATGTTGCAGCTTCACTCTCTCACCACCAACAAA
--------TGGTGTGAGAGAATGAAGCTG 	1
-----------TGTGAGAGAATGAAGCTGC 	1
-------------TGAGAGAATGAAGCTGCCAGC 	8
-------------TGAGAGAATGAAGCTGCCAG 	3
-------------------AATGAAGCTGCCAGCATGATCTG 	1
-------------------AATGAAGCTGCCAGCATGATCTGG 	2
-------------------AATGAAGCTGCCAGCATGATCT 	5
--------------------ATGAAGCTGCCAGCATGATCTGG 	16
--------------------ATGAAGCTGCCAGCATGATCTG 	8
--------------------ATGAAGCTGCCAGCATGATCT 	13
---------------------TGAAGCTGCCAGCATGATCTGG 	1518
---------------------TGAAGCTGCCAGCATGATCT 	428
---------------------TGAAGCTGCCAGCATGATCTG 	671
---------------------TGAAGCTGCCAGCATGATCTGGTT 	1
---------------------TGAAGCTGCCAGCATGATCTGGT 	2
---------------------TGAAGCTGCCAGCATGATC 	77
----------------------GAAGCTGCCAGCATGATCTGG 	10
----------------------GAAGCTGCCAGCATGATCTG 	5
-----------------------AAGCTGCCAGCATGATCTGG 	1
-----------------------AAGCTGCCAGCATGATCTG 	2
-----------------------AAGCTGCCAGCATGATCTGGTT 	1
------------------------AGCTGCCAGCATGATCTGG 	1
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCAGATCATGTTGCAGCTTCA 	3
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGATCATGTTGCAGCTTCAC 	1
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATCATGTTGCAGCTTCA 	1
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATCATGTTGCAGCTTCACT 	31
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCATGTTGCAGCTTCACTCTC 	3

Overlaps with: MNEST041955 MNEST048863
Overlaps with miRBase pre-miRNAs: osa-MIR167e
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
20 Oryza sativa GSM520638-18676 TGAAGCTGCCAGCATGATCTGA AGATCATCCGGCAGCTTCATC up 2 1


Secondary structure

GATGGGCTGTTAATTCGCTTTGTTTGTGCGCCATAAGCAGGTGAAGCTGCCAGCATGATCTGAAAGCATCTCAAACCAGCGATCAGATCATCCGGCAGCTTCATCTTCTCATGGCAGCACACCAGCTTGATTGATTGATGATG
----------------------------------------GTGAAGCTGCCAGCATGATCTG 	2
----------------------------------------GTGAAGCTGCCAGCATGATCTGA 	2
-----------------------------------------TGAAGCTGCCAGCATGATCT 	428
-----------------------------------------TGAAGCTGCCAGCATGATCTGAAA 	2
-----------------------------------------TGAAGCTGCCAGCATGATCTG 	671
-----------------------------------------TGAAGCTGCCAGCATGATCTGAAAG 	1
-----------------------------------------TGAAGCTGCCAGCATGATCTGA 	102640
-----------------------------------------TGAAGCTGCCAGCATGATCTGAA 	4
-----------------------------------------TGAAGCTGCCAGCATGATC 	77
------------------------------------------GAAGCTGCCAGCATGATCTG 	5
------------------------------------------GAAGCTGCCAGCATGATCTGA 	84
-------------------------------------------AAGCTGCCAGCATGATCTGA 	51
-------------------------------------------AAGCTGCCAGCATGATCTG 	2
--------------------------------------------AGCTGCCAGCATGATCTGA 	126
------------------------------------------------------------------------------------AGATCATCCGGCAGCTTCATC 	14
------------------------------------------------------------------------------------AGATCATCCGGCAGCTTCAT 	1
---------------------------------------------------------------------------------------TCATCCGGCAGCTTCATCTTC 	9

Overlaps with: MNEST041957 MNEST048865
Overlaps with miRBase pre-miRNAs: osa-MIR167g
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
21 Oryza sativa GSM520638-18676 TGAAGCTGCCAGCATGATCTGA AGATCGTGCTGCGCAGTTTCATC up 0 1


Secondary structure

GATGTGTGCACCTTAAGCAGCTGAAGCTGCCAGCATGATCTGATCTTTTGCGATCTCTTTTTTTATCTGAATAAGTTGATGGAAATATTGGGTTCCTAAGATTCAGATCGTGCTGCGCAGTTTCATCTGCTAATCGATGCACTAC
-------------------GCTGAAGCTGCCAGCATGATCTGA 	2
--------------------CTGAAGCTGCCAGCATGATCTG 	1
--------------------CTGAAGCTGCCAGCATGATCTGA 	51
--------------------CTGAAGCTGCCAGCATGATCT 	2
---------------------TGAAGCTGCCAGCATGATCT 	428
---------------------TGAAGCTGCCAGCATGATCTG 	671
---------------------TGAAGCTGCCAGCATGATCTGAT 	23
---------------------TGAAGCTGCCAGCATGATCTGA 	102640
---------------------TGAAGCTGCCAGCATGATC 	77
----------------------GAAGCTGCCAGCATGATCTGAT 	2
----------------------GAAGCTGCCAGCATGATCTG 	5
----------------------GAAGCTGCCAGCATGATCTGA 	84
-----------------------AAGCTGCCAGCATGATCTGA 	51
-----------------------AAGCTGCCAGCATGATCTG 	2
------------------------AGCTGCCAGCATGATCTGA 	126
--------------------------------------------------------------------------------------------------------AGATCGTGCTGCGCAGTTTCA 	1


HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
22 Oryza sativa GSM686040-31373 TGAAGCTGCCAGCATGATCTGA AGATCATCTGGCAGTTTCATC up 0 1


Secondary structure

TCTCTCATATGTATGGTGCACCACAAGTGGATGAAGCTGCCAGCATGATCTGATCACAGTAGTTCTCTAGCTGATGATGATTTACAAAACCTAGAGACATGCATCAGATCATCTGGCAGTTTCATCTTCTCATGGCAGCACAAAAAGAGCTTAC
------------------------------ATGAAGCTGCCAGCATGAT 	2
-------------------------------TGAAGCTGCCAGCATGATCTGAT 	25
-------------------------------TGAAGCTGCCAGCATGATCTGA 	23619
-------------------------------TGAAGCTGCCAGCATGATCTG 	775
-------------------------------TGAAGCTGCCAGCATGATCT 	3219
-------------------------------TGAAGCTGCCAGCATGATC 	307
--------------------------------GAAGCTGCCAGCATGATCTGA 	143
--------------------------------GAAGCTGCCAGCATGATCT 	15
---------------------------------AAGCTGCCAGCATGATCTGA 	34
---------------------------------AAGCTGCCAGCATGATCTG 	1
----------------------------------AGCTGCCAGCATGATCTGA 	4
--------------------------------------------------------------------------------------------------------CAGATCATCTGGCAGTTTCAT 	1

Overlaps with: MNEST041956 MNEST048864
Overlaps with miRBase pre-miRNAs: osa-MIR167f
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
23 Oryza sativa GSM686040-31373 TGAAGCTGCCAGCATGATCTGA AGGTCATGCTGTAGTTTCATC up 0 1


Secondary structure

TAACTAAGGGCAGTGGTGCACCACAAGTTGGTGAAGCTGCCAGCATGATCTGATGATGATGATGATCCACCTCTCTCATCTGTGTTCTTGATTAATTACGGATCAATCGATCAGGTCATGCTGTAGTTTCATCTGCTGGTTGGGAGCACAGCAAAAAAAAA
-------------------------------TGAAGCTGCCAGCATGATCTGAT 	25
-------------------------------TGAAGCTGCCAGCATGATCTGA 	23619
-------------------------------TGAAGCTGCCAGCATGATCTG 	775
-------------------------------TGAAGCTGCCAGCATGATCT 	3219
-------------------------------TGAAGCTGCCAGCATGATC 	307
--------------------------------GAAGCTGCCAGCATGATCTGA 	143
--------------------------------GAAGCTGCCAGCATGATCT 	15
---------------------------------AAGCTGCCAGCATGATCTGA 	34
---------------------------------AAGCTGCCAGCATGATCTG 	1
----------------------------------AGCTGCCAGCATGATCTGA 	4
------------------------------------CTGCCAGCATGATCTGATGA 	1
----------------------------------------------------------------------------------------------------------------AGGTCATGCTGTAGTTTCATC 	1


HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
24 Oryza sativa GSM686040-31373 TGAAGCTGCCAGCATGATCTGA AGATCATGCTGTGCAGTTTCATC up 0 1


Secondary structure

CCTTGATTGTTGAGGTGCAACCATTAGGAGCTGAAGCTGCCAGCATGATCTGATGAGTGCTTATTAGGTGAGGGCAGAATTGACTGCCAAAACAAAGATCAGATCATGCTGTGCAGTTTCATCTGCTTGTGGCTGCACAAAATTAAAGGGC
-----------GAGGTGCAACCATTAGGAGCTGAA 	1
------------------------------CTGAAGCTGCCAGCATGATCTGA 	14
------------------------------CTGAAGCTGCCAGCATGATCTG 	2
------------------------------CTGAAGCTGCCAGCATGATCT 	4
-------------------------------TGAAGCTGCCAGCATGATCTGAT 	25
-------------------------------TGAAGCTGCCAGCATGATCTGA 	23619
-------------------------------TGAAGCTGCCAGCATGATCTG 	775
-------------------------------TGAAGCTGCCAGCATGATCT 	3219
-------------------------------TGAAGCTGCCAGCATGATC 	307
--------------------------------GAAGCTGCCAGCATGATCTGA 	143
--------------------------------GAAGCTGCCAGCATGATCT 	15
---------------------------------AAGCTGCCAGCATGATCTGA 	34
---------------------------------AAGCTGCCAGCATGATCTG 	1
----------------------------------AGCTGCCAGCATGATCTGA 	4
------------------------------------CTGCCAGCATGATCTGATGA 	1
----------------------------------------------------------------------------------------------------AGATCATGCTGTGCAGTTTCAT 	1

Overlaps with: MNEST050424
Overlaps with miRBase pre-miRNAs: osa-MIR167d
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
25 Oryza sativa GSM686040-31373 TGAAGCTGCCAGCATGATCTGA AGATCATCCGGCAGCTTCATC up 2 1


Secondary structure

GATGGGCTGTTAATTCGCTTTGTTTGTGCGCCATAAGCAGGTGAAGCTGCCAGCATGATCTGAAAGCATCTCAAACCAGCGATCAGATCATCCGGCAGCTTCATCTTCTCATGGCAGCACACCAGCTTGATTGATTGATGATG
-----------------------------------------TGAAGCTGCCAGCATGATCTGAAAG 	1
-----------------------------------------TGAAGCTGCCAGCATGATCTGAAA 	2
-----------------------------------------TGAAGCTGCCAGCATGATCTGAA 	28
-----------------------------------------TGAAGCTGCCAGCATGATCTGA 	23619
-----------------------------------------TGAAGCTGCCAGCATGATCTG 	775
-----------------------------------------TGAAGCTGCCAGCATGATCT 	3219
-----------------------------------------TGAAGCTGCCAGCATGATC 	307
------------------------------------------GAAGCTGCCAGCATGATCTGAA 	2
------------------------------------------GAAGCTGCCAGCATGATCTGA 	143
------------------------------------------GAAGCTGCCAGCATGATCT 	15
-------------------------------------------AAGCTGCCAGCATGATCTGA 	34
-------------------------------------------AAGCTGCCAGCATGATCTG 	1
--------------------------------------------AGCTGCCAGCATGATCTGA 	4
------------------------------------------------------------------------------------AGATCATCCGGCAGCTTCATC 	4
---------------------------------------------------------------------------------------TCATCCGGCAGCTTCATCTTCT 	2
---------------------------------------------------------------------------------------TCATCCGGCAGCTTCATCTTC 	11

Overlaps with: MNEST041957 MNEST048865
Overlaps with miRBase pre-miRNAs: osa-MIR167g
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
26 Oryza sativa GSM686040-31373 TGAAGCTGCCAGCATGATCTGA AGATCGTGCTGCGCAGTTTCATC up 0 1


Secondary structure

GATGTGTGCACCTTAAGCAGCTGAAGCTGCCAGCATGATCTGATCTTTTGCGATCTCTTTTTTTATCTGAATAAGTTGATGGAAATATTGGGTTCCTAAGATTCAGATCGTGCTGCGCAGTTTCATCTGCTAATCGATGCACTAC
--------------------CTGAAGCTGCCAGCATGATCTGA 	14
--------------------CTGAAGCTGCCAGCATGATCTG 	2
--------------------CTGAAGCTGCCAGCATGATCT 	4
---------------------TGAAGCTGCCAGCATGATCTGAT 	25
---------------------TGAAGCTGCCAGCATGATCTGA 	23619
---------------------TGAAGCTGCCAGCATGATCTG 	775
---------------------TGAAGCTGCCAGCATGATCT 	3219
---------------------TGAAGCTGCCAGCATGATC 	307
----------------------GAAGCTGCCAGCATGATCTGA 	143
----------------------GAAGCTGCCAGCATGATCT 	15
-----------------------AAGCTGCCAGCATGATCTGA 	34
-----------------------AAGCTGCCAGCATGATCTG 	1
------------------------AGCTGCCAGCATGATCTGA 	4
--------------------------------------------------------------------------------------------------------AGATCGTGCTGCGCAGTTTCA 	1


HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
27 Oryza sativa GSM520640-18679 TGAAGCTGCCAGCATGATCTGA AGATCATCTGGCAGTTTCATC up 0 1


Secondary structure

TCTCTCATATGTATGGTGCACCACAAGTGGATGAAGCTGCCAGCATGATCTGATCACAGTAGTTCTCTAGCTGATGATGATTTACAAAACCTAGAGACATGCATCAGATCATCTGGCAGTTTCATCTTCTCATGGCAGCACAAAAAGAGCTTAC
----------------------------GGATGAAGCTGCCAGCATGATCTGA 	3
-----------------------------GATGAAGCTGCCAGCATGATCT 	1
-----------------------------GATGAAGCTGCCAGCATGATCTGA 	4
------------------------------ATGAAGCTGCCAGCATGATCTGA 	152
------------------------------ATGAAGCTGCCAGCATGATC 	1
------------------------------ATGAAGCTGCCAGCATGATCT 	7
------------------------------ATGAAGCTGCCAGCATGATCTG 	11
-------------------------------TGAAGCTGCCAGCATGATC 	90
-------------------------------TGAAGCTGCCAGCATGATCT 	449
-------------------------------TGAAGCTGCCAGCATGATCTG 	995
-------------------------------TGAAGCTGCCAGCATGATCTGAT 	24
-------------------------------TGAAGCTGCCAGCATGATCTGATCA 	1
-------------------------------TGAAGCTGCCAGCATGATCTGA 	156978
--------------------------------GAAGCTGCCAGCATGATCTGAT 	3
--------------------------------GAAGCTGCCAGCATGATCTG 	3
--------------------------------GAAGCTGCCAGCATGATCT 	3
--------------------------------GAAGCTGCCAGCATGATCTGA 	117
---------------------------------AAGCTGCCAGCATGATCTGA 	53
---------------------------------AAGCTGCCAGCATGATCTGAT 	1
---------------------------------AAGCTGCCAGCATGATCTG 	1
----------------------------------AGCTGCCAGCATGATCTGA 	221
---------------------------------------------------------------------------------------------------------AGATCATCTGGCAGTTTCATC 	4

Overlaps with: MNEST041956 MNEST048864
Overlaps with miRBase pre-miRNAs: osa-MIR167f
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
28 Oryza sativa GSM520640-18679 TGAAGCTGCCAGCATGATCTGA AGGTCATGCTGTAGTTTCATC up 0 1


Secondary structure

TAACTAAGGGCAGTGGTGCACCACAAGTTGGTGAAGCTGCCAGCATGATCTGATGATGATGATGATCCACCTCTCTCATCTGTGTTCTTGATTAATTACGGATCAATCGATCAGGTCATGCTGTAGTTTCATCTGCTGGTTGGGAGCACAGCAAAAAAAAA
---------------------------TTGGTGAAGCTGCCAGCATGATCTGA 	1
------------------------------GTGAAGCTGCCAGCATGATCTGA 	3
-------------------------------TGAAGCTGCCAGCATGATC 	90
-------------------------------TGAAGCTGCCAGCATGATCT 	449
-------------------------------TGAAGCTGCCAGCATGATCTG 	995
-------------------------------TGAAGCTGCCAGCATGATCTGAT 	24
-------------------------------TGAAGCTGCCAGCATGATCTGA 	156978
--------------------------------GAAGCTGCCAGCATGATCTGAT 	3
--------------------------------GAAGCTGCCAGCATGATCTG 	3
--------------------------------GAAGCTGCCAGCATGATCT 	3
--------------------------------GAAGCTGCCAGCATGATCTGA 	117
---------------------------------AAGCTGCCAGCATGATCTGA 	53
---------------------------------AAGCTGCCAGCATGATCTGAT 	1
---------------------------------AAGCTGCCAGCATGATCTG 	1
----------------------------------AGCTGCCAGCATGATCTGA 	221
--------------------------------------------------------------------------------------------------------------TCAGGTCATGCTGTAGTTTCA 	1
---------------------------------------------------------------------------------------------------------------CAGGTCATGCTGTAGTTTCATC 	2
----------------------------------------------------------------------------------------------------------------AGGTCATGCTGTAGTTTCA 	2
----------------------------------------------------------------------------------------------------------------AGGTCATGCTGTAGTTTCAT 	9
----------------------------------------------------------------------------------------------------------------AGGTCATGCTGTAGTTTCATC 	257


HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
29 Oryza sativa GSM520640-18679 TGAAGCTGCCAGCATGATCTGA AGATCATGCTGTGCAGTTTCATC up 0 1


Secondary structure

CCTTGATTGTTGAGGTGCAACCATTAGGAGCTGAAGCTGCCAGCATGATCTGATGAGTGCTTATTAGGTGAGGGCAGAATTGACTGCCAAAACAAAGATCAGATCATGCTGTGCAGTTTCATCTGCTTGTGGCTGCACAAAATTAAAGGGC
------------------------------CTGAAGCTGCCAGCATGATCTG 	3
------------------------------CTGAAGCTGCCAGCATGATCTGA 	53
------------------------------CTGAAGCTGCCAGCATGATCT 	1
-------------------------------TGAAGCTGCCAGCATGATC 	90
-------------------------------TGAAGCTGCCAGCATGATCT 	449
-------------------------------TGAAGCTGCCAGCATGATCTG 	995
-------------------------------TGAAGCTGCCAGCATGATCTGAT 	24
-------------------------------TGAAGCTGCCAGCATGATCTGA 	156978
--------------------------------GAAGCTGCCAGCATGATCTGAT 	3
--------------------------------GAAGCTGCCAGCATGATCTG 	3
--------------------------------GAAGCTGCCAGCATGATCT 	3
--------------------------------GAAGCTGCCAGCATGATCTGA 	117
---------------------------------AAGCTGCCAGCATGATCTGA 	53
---------------------------------AAGCTGCCAGCATGATCTGAT 	1
---------------------------------AAGCTGCCAGCATGATCTG 	1
----------------------------------AGCTGCCAGCATGATCTGA 	221
-----------------------------------------------------------------------------------------------------GATCATGCTGTGCAGTTTCATC 	19

Overlaps with: MNEST050424
Overlaps with miRBase pre-miRNAs: osa-MIR167d
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
30 Oryza sativa GSM520640-18679 TGAAGCTGCCAGCATGATCTGG AGATCATGTTGCAGCTTCACT up 0 1


Secondary structure

GTTCTTGCTGGTGTGAGAGGCTGAAGCTGCCAGCATGATCTGGTCCATGAGTTGCACTGCTGAATATATTGAATTCAGCCAGGAGCTGCTACTGCAGTTCTGATCTCGATCTGCATTCGTTGTTCTGAGCTATGTATGGATTTGATCGGTTTGAAGGCATCCATGTCTTTAATTTCATCGATCAGATCATGTTGCAGCTTCACTCTCTCACTACCAGCAAAA
--------------------CTGAAGCTGCCAGCATGATCTGG 	5
--------------------CTGAAGCTGCCAGCATGATCTG 	3
--------------------CTGAAGCTGCCAGCATGATCT 	1
---------------------TGAAGCTGCCAGCATGATC 	90
---------------------TGAAGCTGCCAGCATGATCTGG 	2835
---------------------TGAAGCTGCCAGCATGATCT 	449
---------------------TGAAGCTGCCAGCATGATCTG 	995
---------------------TGAAGCTGCCAGCATGATCTGGT 	5
----------------------GAAGCTGCCAGCATGATCTGG 	9
----------------------GAAGCTGCCAGCATGATCTG 	3
----------------------GAAGCTGCCAGCATGATCT 	3
----------------------GAAGCTGCCAGCATGATCTGGT 	2
-----------------------AAGCTGCCAGCATGATCTG 	1
-----------------------AAGCTGCCAGCATGATCTGG 	2
------------------------AGCTGCCAGCATGATCTGG 	5
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCAGATCATGTTGCAGCTTCA 	4
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATCATGTTGCAGCTTCACT 	41
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATCATGTTGCAGCTTCAC 	1
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCATGTTGCAGCTTCACTCTC 	1
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCATGTTGCAGCTTCACTC 	1
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCATGTTGCAGCTTCACTCTC 	4

Overlaps with: MNEST041959 MNEST048867
Overlaps with miRBase pre-miRNAs: osa-MIR167i
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
31 Oryza sativa GSM520640-18679 TGAAGCTGCCAGCATGATCTGG AGATCATGTTGCAGCTTCACT up 0 1


Secondary structure

AGTTTTGCTGGTGTGAGAGAATGAAGCTGCCAGCATGATCTGGTTGTCAGGCATGAGCCAAATCTATCCATGGTGTTGGTGGTACTGAAATTACCGCGTTTTCGAGGTTTTTCGTCGTGTCAACTTGCGAAGGGAATTACGGGTTCTTGATGAGCATTGGTGATAGGAGGTGTGGGCTTGGTTAGTAGAGGTAGAATTATGATTGTTCTTGTGAGTTTCAGTAAGAGGTGGGAGTGATTGGAATTTGGCTCCATCAGATCATGTTGCAGCTTCACTCTCTCACCACCAACAAA
----TTGCTGGTGTGAGAGAATGAA 	1
--------TGGTGTGAGAGAATGAAGCTG 	2
-----------TGTGAGAGAATGAAGCTGC 	2
------------GTGAGAGAATGAAGCTGCC 	2
-------------TGAGAGAATGAAGCTGCCAGC 	11
-------------TGAGAGAATGAAGCTGCCAG 	2
-------------------AATGAAGCTGCCAGCATGATCTG 	2
-------------------AATGAAGCTGCCAGCATGATCT 	1
--------------------ATGAAGCTGCCAGCATGATCTGG 	25
--------------------ATGAAGCTGCCAGCATGATC 	1
--------------------ATGAAGCTGCCAGCATGATCT 	7
--------------------ATGAAGCTGCCAGCATGATCTG 	11
---------------------TGAAGCTGCCAGCATGATC 	90
---------------------TGAAGCTGCCAGCATGATCTGG 	2835
---------------------TGAAGCTGCCAGCATGATCT 	449
---------------------TGAAGCTGCCAGCATGATCTG 	995
---------------------TGAAGCTGCCAGCATGATCTGGTT 	1
---------------------TGAAGCTGCCAGCATGATCTGGT 	5
----------------------GAAGCTGCCAGCATGATCTGG 	9
----------------------GAAGCTGCCAGCATGATCTG 	3
----------------------GAAGCTGCCAGCATGATCT 	3
----------------------GAAGCTGCCAGCATGATCTGGT 	2
-----------------------AAGCTGCCAGCATGATCTG 	1
-----------------------AAGCTGCCAGCATGATCTGG 	2
-----------------------AAGCTGCCAGCATGATCTGGTT 	1
------------------------AGCTGCCAGCATGATCTGG 	5
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCAGATCATGTTGCAGCTTCA 	4
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATCATGTTGCAGCTTCACT 	41
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATCATGTTGCAGCTTCAC 	1
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCATGTTGCAGCTTCACTCTC 	1
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCATGTTGCAGCTTCACTC 	1
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCATGTTGCAGCTTCACTCTC 	4

Overlaps with: MNEST041955 MNEST048863
Overlaps with miRBase pre-miRNAs: osa-MIR167e
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
32 Oryza sativa GSM520640-18679 TGAAGCTGCCAGCATGATCTGA AGATCATCCGGCAGCTTCATC up 2 1


Secondary structure

GATGGGCTGTTAATTCGCTTTGTTTGTGCGCCATAAGCAGGTGAAGCTGCCAGCATGATCTGAAAGCATCTCAAACCAGCGATCAGATCATCCGGCAGCTTCATCTTCTCATGGCAGCACACCAGCTTGATTGATTGATGATG
--------------------------------------AGGTGAAGCTGCCAGCATGATC 	1
--------------------------------------AGGTGAAGCTGCCAGCATGATCTGA 	5
----------------------------------------GTGAAGCTGCCAGCATGATCTGA 	3
-----------------------------------------TGAAGCTGCCAGCATGATCTGAA 	18
-----------------------------------------TGAAGCTGCCAGCATGATC 	90
-----------------------------------------TGAAGCTGCCAGCATGATCT 	449
-----------------------------------------TGAAGCTGCCAGCATGATCTG 	995
-----------------------------------------TGAAGCTGCCAGCATGATCTGAAAG 	1
-----------------------------------------TGAAGCTGCCAGCATGATCTGA 	156978
------------------------------------------GAAGCTGCCAGCATGATCTG 	3
------------------------------------------GAAGCTGCCAGCATGATCT 	3
------------------------------------------GAAGCTGCCAGCATGATCTGA 	117
-------------------------------------------AAGCTGCCAGCATGATCTGA 	53
-------------------------------------------AAGCTGCCAGCATGATCTG 	1
-------------------------------------------AAGCTGCCAGCATGATCTGAAAGCA 	4
--------------------------------------------AGCTGCCAGCATGATCTGAAAGCA 	1
--------------------------------------------AGCTGCCAGCATGATCTGA 	221
------------------------------------------------------------------------------------AGATCATCCGGCAGCTTCATC 	5
---------------------------------------------------------------------------------------TCATCCGGCAGCTTCATCTTC 	5

Overlaps with: MNEST041957 MNEST048865
Overlaps with miRBase pre-miRNAs: osa-MIR167g
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
33 Oryza sativa GSM520640-18679 TGAAGCTGCCAGCATGATCTGA AGATCGTGCTGCGCAGTTTCATC up 0 1


Secondary structure

GATGTGTGCACCTTAAGCAGCTGAAGCTGCCAGCATGATCTGATCTTTTGCGATCTCTTTTTTTATCTGAATAAGTTGATGGAAATATTGGGTTCCTAAGATTCAGATCGTGCTGCGCAGTTTCATCTGCTAATCGATGCACTAC
--------------------CTGAAGCTGCCAGCATGATCTG 	3
--------------------CTGAAGCTGCCAGCATGATCTGA 	53
--------------------CTGAAGCTGCCAGCATGATCT 	1
---------------------TGAAGCTGCCAGCATGATC 	90
---------------------TGAAGCTGCCAGCATGATCT 	449
---------------------TGAAGCTGCCAGCATGATCTG 	995
---------------------TGAAGCTGCCAGCATGATCTGAT 	24
---------------------TGAAGCTGCCAGCATGATCTGA 	156978
----------------------GAAGCTGCCAGCATGATCTGAT 	3
----------------------GAAGCTGCCAGCATGATCTG 	3
----------------------GAAGCTGCCAGCATGATCT 	3
----------------------GAAGCTGCCAGCATGATCTGA 	117
-----------------------AAGCTGCCAGCATGATCTGA 	53
-----------------------AAGCTGCCAGCATGATCTGAT 	1
-----------------------AAGCTGCCAGCATGATCTG 	1
------------------------AGCTGCCAGCATGATCTGA 	221


HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
34 Oryza sativa GSM571077-22529 TGAAGCTGCCAGCATGATCTGA AGATCATCTGGCAGTTTCATC up 0 1


Secondary structure

TCTCTCATATGTATGGTGCACCACAAGTGGATGAAGCTGCCAGCATGATCTGATCACAGTAGTTCTCTAGCTGATGATGATTTACAAAACCTAGAGACATGCATCAGATCATCTGGCAGTTTCATCTTCTCATGGCAGCACAAAAAGAGCTTAC
------------------------------ATGAAGCTGCCAGCATGATCTG 	1
-------------------------------TGAAGCTGCCAGCATGATCTGAT 	28
-------------------------------TGAAGCTGCCAGCATGATCTGA 	20166
-------------------------------TGAAGCTGCCAGCATGATCTG 	2221
-------------------------------TGAAGCTGCCAGCATGATCT 	298
-------------------------------TGAAGCTGCCAGCATGATC 	125
--------------------------------GAAGCTGCCAGCATGATCTGA 	426
--------------------------------GAAGCTGCCAGCATGATCTG 	11
--------------------------------GAAGCTGCCAGCATGATCT 	6
---------------------------------AAGCTGCCAGCATGATCTGA 	41
---------------------------------AAGCTGCCAGCATGATCTG 	2
---------------------------------------------------------------------------------------------------------AGATCATCTGGCAGTTTCATC 	1

Overlaps with: MNEST041956 MNEST048864
Overlaps with miRBase pre-miRNAs: osa-MIR167f
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
35 Oryza sativa GSM571077-22529 TGAAGCTGCCAGCATGATCTGA AGGTCATGCTGTAGTTTCATC up 0 1


Secondary structure

TAACTAAGGGCAGTGGTGCACCACAAGTTGGTGAAGCTGCCAGCATGATCTGATGATGATGATGATCCACCTCTCTCATCTGTGTTCTTGATTAATTACGGATCAATCGATCAGGTCATGCTGTAGTTTCATCTGCTGGTTGGGAGCACAGCAAAAAAAAA
-------------------------------TGAAGCTGCCAGCATGATCTGAT 	28
-------------------------------TGAAGCTGCCAGCATGATCTGA 	20166
-------------------------------TGAAGCTGCCAGCATGATCTG 	2221
-------------------------------TGAAGCTGCCAGCATGATCT 	298
-------------------------------TGAAGCTGCCAGCATGATC 	125
--------------------------------GAAGCTGCCAGCATGATCTGA 	426
--------------------------------GAAGCTGCCAGCATGATCTG 	11
--------------------------------GAAGCTGCCAGCATGATCT 	6
---------------------------------AAGCTGCCAGCATGATCTGA 	41
---------------------------------AAGCTGCCAGCATGATCTG 	2
----------------------------------------------------------------------------------------------------------------AGGTCATGCTGTAGTTTCATC 	1


HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
36 Oryza sativa GSM571077-22529 TGAAGCTGCCAGCATGATCTGA AGATCATGCTGTGCAGTTTCATC up 0 1


Secondary structure

CCTTGATTGTTGAGGTGCAACCATTAGGAGCTGAAGCTGCCAGCATGATCTGATGAGTGCTTATTAGGTGAGGGCAGAATTGACTGCCAAAACAAAGATCAGATCATGCTGTGCAGTTTCATCTGCTTGTGGCTGCACAAAATTAAAGGGC
------------------------------CTGAAGCTGCCAGCATGATCTGA 	43
------------------------------CTGAAGCTGCCAGCATGATCTG 	3
------------------------------CTGAAGCTGCCAGCATGATCT 	1
-------------------------------TGAAGCTGCCAGCATGATCTGAT 	28
-------------------------------TGAAGCTGCCAGCATGATCTGA 	20166
-------------------------------TGAAGCTGCCAGCATGATCTG 	2221
-------------------------------TGAAGCTGCCAGCATGATCT 	298
-------------------------------TGAAGCTGCCAGCATGATC 	125
--------------------------------GAAGCTGCCAGCATGATCTGA 	426
--------------------------------GAAGCTGCCAGCATGATCTG 	11
--------------------------------GAAGCTGCCAGCATGATCT 	6
---------------------------------AAGCTGCCAGCATGATCTGA 	41
---------------------------------AAGCTGCCAGCATGATCTG 	2
---------------------------------------------------------------------------------------------------CAGATCATGCTGTGCAGTTTCA 	1
----------------------------------------------------------------------------------------------------AGATCATGCTGTGCAGTTTCATC 	1
----------------------------------------------------------------------------------------------------AGATCATGCTGTGCAGTTTCA 	1
----------------------------------------------------------------------------------------------------AGATCATGCTGTGCAGTTTC 	1
-----------------------------------------------------------------------------------------------------GATCATGCTGTGCAGTTTCATC 	3

Overlaps with: MNEST050424
Overlaps with miRBase pre-miRNAs: osa-MIR167d
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
37 Oryza sativa GSM571077-22529 TGAAGCTGCCAGCATGATCTG GATCATGTTGCAGCTTCACT up 0 1


Secondary structure

GTTCTTGCTGGTGTGAGAGGCTGAAGCTGCCAGCATGATCTGGTCCATGAGTTGCACTGCTGAATATATTGAATTCAGCCAGGAGCTGCTACTGCAGTTCTGATCTCGATCTGCATTCGTTGTTCTGAGCTATGTATGGATTTGATCGGTTTGAAGGCATCCATGTCTTTAATTTCATCGATCAGATCATGTTGCAGCTTCACTCTCTCACTACCAGCAAAA
--------------------CTGAAGCTGCCAGCATGATCTG 	3
--------------------CTGAAGCTGCCAGCATGATCT 	1
---------------------TGAAGCTGCCAGCATGATCTGG 	84
---------------------TGAAGCTGCCAGCATGATCTG 	2221
---------------------TGAAGCTGCCAGCATGATCT 	298
---------------------TGAAGCTGCCAGCATGATC 	125
----------------------GAAGCTGCCAGCATGATCTG 	11
----------------------GAAGCTGCCAGCATGATCT 	6
----------------------GAAGCTGCCAGCATGATCTGG 	1
-----------------------AAGCTGCCAGCATGATCTG 	2
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCAGATCATGTTGCAGCTTCA 	2
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCAGATCATGTTGCAGCTTCAC 	1
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGATCATGTTGCAGCTTCAC 	8
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATCATGTTGCAGCTTCACT 	88
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATCATGTTGCAGCTTCAC 	3
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCATGTTGCAGCTTCACTCTC 	1

Overlaps with: MNEST041959 MNEST048867
Overlaps with miRBase pre-miRNAs: osa-MIR167i
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
38 Oryza sativa GSM571077-22529 TGAAGCTGCCAGCATGATCTG GATCATGTTGCAGCTTCACT up 0 1


Secondary structure

AGTTTTGCTGGTGTGAGAGAATGAAGCTGCCAGCATGATCTGGTTGTCAGGCATGAGCCAAATCTATCCATGGTGTTGGTGGTACTGAAATTACCGCGTTTTCGAGGTTTTTCGTCGTGTCAACTTGCGAAGGGAATTACGGGTTCTTGATGAGCATTGGTGATAGGAGGTGTGGGCTTGGTTAGTAGAGGTAGAATTATGATTGTTCTTGTGAGTTTCAGTAAGAGGTGGGAGTGATTGGAATTTGGCTCCATCAGATCATGTTGCAGCTTCACTCTCTCACCACCAACAA
-----------TGTGAGAGAATGAAGCTGCC 	2
-------------------AATGAAGCTGCCAGCATGA 	1
--------------------ATGAAGCTGCCAGCATGATCTG 	1
---------------------TGAAGCTGCCAGCATGATCTGG 	84
---------------------TGAAGCTGCCAGCATGATCTG 	2221
---------------------TGAAGCTGCCAGCATGATCT 	298
---------------------TGAAGCTGCCAGCATGATC 	125
----------------------GAAGCTGCCAGCATGATCTG 	11
----------------------GAAGCTGCCAGCATGATCT 	6
----------------------GAAGCTGCCAGCATGATCTGG 	1
-----------------------AAGCTGCCAGCATGATCTG 	2
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCAGATCATGTTGCAGCTTCA 	2
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCAGATCATGTTGCAGCTTCAC 	1
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGATCATGTTGCAGCTTCAC 	8
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATCATGTTGCAGCTTCACT 	88
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATCATGTTGCAGCTTCAC 	3
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCATGTTGCAGCTTCACTCTC 	1

Overlaps with: MNEST041955 MNEST048863
Overlaps with miRBase pre-miRNAs: osa-MIR167e
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
39 Oryza sativa GSM571077-22529 TGAAGCTGCCAGCATGATCTGA AGATCATCCGGCAGCTTCATC up 2 1


Secondary structure

GATGGGCTGTTAATTCGCTTTGTTTGTGCGCCATAAGCAGGTGAAGCTGCCAGCATGATCTGAAAGCATCTCAAACCAGCGATCAGATCATCCGGCAGCTTCATCTTCTCATGGCAGCACACCAGCTTGATTGATTGATGATG
-----------------------------------------TGAAGCTGCCAGCATGATCTGAAA 	86
-----------------------------------------TGAAGCTGCCAGCATGATCTGAA 	383
-----------------------------------------TGAAGCTGCCAGCATGATCTGA 	20166
-----------------------------------------TGAAGCTGCCAGCATGATCTG 	2221
-----------------------------------------TGAAGCTGCCAGCATGATCT 	298
-----------------------------------------TGAAGCTGCCAGCATGATC 	125
------------------------------------------GAAGCTGCCAGCATGATCTGA 	426
------------------------------------------GAAGCTGCCAGCATGATCTG 	11
------------------------------------------GAAGCTGCCAGCATGATCT 	6
------------------------------------------GAAGCTGCCAGCATGATCTGAA 	2
-------------------------------------------AAGCTGCCAGCATGATCTGA 	41
-------------------------------------------AAGCTGCCAGCATGATCTG 	2
-------------------------------------------AAGCTGCCAGCATGATCTGAAA 	1
-------------------------------------------AAGCTGCCAGCATGATCTGAAAGCA 	1
----------------------------------------------------------------------------------TCAGATCATCCGGCAGCTTCA 	1
------------------------------------------------------------------------------------AGATCATCCGGCAGCTTCATC 	20
-------------------------------------------------------------------------------------GATCATCCGGCAGCTTCATC 	1
---------------------------------------------------------------------------------------TCATCCGGCAGCTTCATCTTC 	22
----------------------------------------------------------------------------------------CATCCGGCAGCTTCATCTTC 	1
-----------------------------------------------------------------------------------------ATCCGGCAGCTTCATCTTC 	1

Overlaps with: MNEST041957 MNEST048865
Overlaps with miRBase pre-miRNAs: osa-MIR167g
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
40 Oryza sativa GSM571077-22529 TGAAGCTGCCAGCATGATCTGA AGATCGTGCTGCGCAGTTTCATC up 0 1


Secondary structure

GATGTGTGCACCTTAAGCAGCTGAAGCTGCCAGCATGATCTGATCTTTTGCGATCTCTTTTTTTATCTGAATAAGTTGATGGAAATATTGGGTTCCTAAGATTCAGATCGTGCTGCGCAGTTTCATCTGCTAATCGATGCACTAC
--------------------CTGAAGCTGCCAGCATGATCTGA 	43
--------------------CTGAAGCTGCCAGCATGATCTG 	3
--------------------CTGAAGCTGCCAGCATGATCT 	1
---------------------TGAAGCTGCCAGCATGATCTGAT 	28
---------------------TGAAGCTGCCAGCATGATCTGA 	20166
---------------------TGAAGCTGCCAGCATGATCTG 	2221
---------------------TGAAGCTGCCAGCATGATCT 	298
---------------------TGAAGCTGCCAGCATGATC 	125
----------------------GAAGCTGCCAGCATGATCTGA 	426
----------------------GAAGCTGCCAGCATGATCTG 	11
----------------------GAAGCTGCCAGCATGATCT 	6
-----------------------AAGCTGCCAGCATGATCTGA 	41
-----------------------AAGCTGCCAGCATGATCTG 	2
--------------------------------------------------------------------------------------------------------AGATCGTGCTGCGCAGTTTCA 	3
--------------------------------------------------------------------------------------------------------AGATCGTGCTGCGCAGTTTCATC 	1
---------------------------------------------------------------------------------------------------------GATCGTGCTGCGCAGTTTCATC 	1


HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
41 Oryza sativa GSM686039-31370 TGAAGCTGCCAGCATGATCTGA AGATCATCTGGCAGTTTCATC up 0 1


Secondary structure

TCTCTCATATGTATGGTGCACCACAAGTGGATGAAGCTGCCAGCATGATCTGATCACAGTAGTTCTCTAGCTGATGATGATTTACAAAACCTAGAGACATGCATCAGATCATCTGGCAGTTTCATCTTCTCATGGCAGCACAAAAAGAGCTTAC
-------------------------------TGAAGCTGCCAGCATGATCTGAT 	9
-------------------------------TGAAGCTGCCAGCATGATCTGA 	13368
-------------------------------TGAAGCTGCCAGCATGATCTG 	114
-------------------------------TGAAGCTGCCAGCATGATCT 	4306
-------------------------------TGAAGCTGCCAGCATGATC 	373
--------------------------------GAAGCTGCCAGCATGATCTGA 	68
--------------------------------GAAGCTGCCAGCATGATCT 	9
---------------------------------AAGCTGCCAGCATGATCTGA 	15

Overlaps with: MNEST041956 MNEST048864
Overlaps with miRBase pre-miRNAs: osa-MIR167f
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
42 Oryza sativa GSM686039-31370 TGAAGCTGCCAGCATGATCTGA AGGTCATGCTGTAGTTTCATC up 0 1


Secondary structure

TAACTAAGGGCAGTGGTGCACCACAAGTTGGTGAAGCTGCCAGCATGATCTGATGATGATGATGATCCACCTCTCTCATCTGTGTTCTTGATTAATTACGGATCAATCGATCAGGTCATGCTGTAGTTTCATCTGCTGGTTGGGAGCACAGCAAAAAAAAA
-------------------------------TGAAGCTGCCAGCATGATCTGAT 	9
-------------------------------TGAAGCTGCCAGCATGATCTGA 	13368
-------------------------------TGAAGCTGCCAGCATGATCTG 	114
-------------------------------TGAAGCTGCCAGCATGATCT 	4306
-------------------------------TGAAGCTGCCAGCATGATC 	373
--------------------------------GAAGCTGCCAGCATGATCTGA 	68
--------------------------------GAAGCTGCCAGCATGATCT 	9
---------------------------------AAGCTGCCAGCATGATCTGA 	15
----------------------------------------------------------------------------------------------------------------AGGTCATGCTGTAGTTTCATC 	3


HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
43 Oryza sativa GSM686039-31370 TGAAGCTGCCAGCATGATCTGA AGATCATGCTGTGCAGTTTCATC up 0 1


Secondary structure

CCTTGATTGTTGAGGTGCAACCATTAGGAGCTGAAGCTGCCAGCATGATCTGATGAGTGCTTATTAGGTGAGGGCAGAATTGACTGCCAAAACAAAGATCAGATCATGCTGTGCAGTTTCATCTGCTTGTGGCTGCACAAAATTAAAGGGC
----------TGAGGTGCAACCATTAGGAGCTGA 	1
-----------GAGGTGCAACCATTAGGAGCTGAA 	2
------------------------------CTGAAGCTGCCAGCATGATCTGA 	8
------------------------------CTGAAGCTGCCAGCATGATCT 	1
-------------------------------TGAAGCTGCCAGCATGATCTGAT 	9
-------------------------------TGAAGCTGCCAGCATGATCTGA 	13368
-------------------------------TGAAGCTGCCAGCATGATCTG 	114
-------------------------------TGAAGCTGCCAGCATGATCT 	4306
-------------------------------TGAAGCTGCCAGCATGATC 	373
--------------------------------GAAGCTGCCAGCATGATCTGA 	68
--------------------------------GAAGCTGCCAGCATGATCT 	9
---------------------------------AAGCTGCCAGCATGATCTGA 	15
---------------------------------------------------------------------------AGAATTGACTGCCAAAACAAAGAT 	1
---------------------------------------------------------------------------AGAATTGACTGCCAAAACAAAGA 	1

Overlaps with: MNEST050424
Overlaps with miRBase pre-miRNAs: osa-MIR167d
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
44 Oryza sativa GSM686039-31370 TGAAGCTGCCAGCATGATCTGA AGATCATCCGGCAGCTTCATC up 2 1


Secondary structure

GATGGGCTGTTAATTCGCTTTGTTTGTGCGCCATAAGCAGGTGAAGCTGCCAGCATGATCTGAAAGCATCTCAAACCAGCGATCAGATCATCCGGCAGCTTCATCTTCTCATGGCAGCACACCAGCTTGATTGATTGATGATG
-----------------------------------------TGAAGCTGCCAGCATGATCTGAAA 	1
-----------------------------------------TGAAGCTGCCAGCATGATCTGAA 	17
-----------------------------------------TGAAGCTGCCAGCATGATCTGA 	13368
-----------------------------------------TGAAGCTGCCAGCATGATCTG 	114
-----------------------------------------TGAAGCTGCCAGCATGATCT 	4306
-----------------------------------------TGAAGCTGCCAGCATGATC 	373
------------------------------------------GAAGCTGCCAGCATGATCTGA 	68
------------------------------------------GAAGCTGCCAGCATGATCT 	9
-------------------------------------------AAGCTGCCAGCATGATCTGA 	15

Overlaps with: MNEST041957 MNEST048865
Overlaps with miRBase pre-miRNAs: osa-MIR167g
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
45 Oryza sativa GSM686039-31370 TGAAGCTGCCAGCATGATCTGA AGATCGTGCTGCGCAGTTTCATC up 0 1


Secondary structure

GATGTGTGCACCTTAAGCAGCTGAAGCTGCCAGCATGATCTGATCTTTTGCGATCTCTTTTTTTATCTGAATAAGTTGATGGAAATATTGGGTTCCTAAGATTCAGATCGTGCTGCGCAGTTTCATCTGCTAATCGATGCACTAC
--------------------CTGAAGCTGCCAGCATGATCTGA 	8
--------------------CTGAAGCTGCCAGCATGATCT 	1
---------------------TGAAGCTGCCAGCATGATCTGAT 	9
---------------------TGAAGCTGCCAGCATGATCTGA 	13368
---------------------TGAAGCTGCCAGCATGATCTG 	114
---------------------TGAAGCTGCCAGCATGATCT 	4306
---------------------TGAAGCTGCCAGCATGATC 	373
----------------------GAAGCTGCCAGCATGATCTGA 	68
----------------------GAAGCTGCCAGCATGATCT 	9
-----------------------AAGCTGCCAGCATGATCTGA 	15


HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
46 Oryza sativa GSM520634-18667 TGAAGCTGCCAGCATGATCTGA AGATCATCTGGCAGTTTCATC up 0 1


Secondary structure

TCTCTCATATGTATGGTGCACCACAAGTGGATGAAGCTGCCAGCATGATCTGATCACAGTAGTTCTCTAGCTGATGATGATTTACAAAACCTAGAGACATGCATCAGATCATCTGGCAGTTTCATCTTCTCATGGCAGCACAAAAAGAGCTTAC
-------------------------------TGAAGCTGCCAGCATGATCT 	5
-------------------------------TGAAGCTGCCAGCATGATCTGA 	402
-------------------------------TGAAGCTGCCAGCATGATCTG 	43

Overlaps with: MNEST041956 MNEST048864
Overlaps with miRBase pre-miRNAs: osa-MIR167f
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
47 Oryza sativa GSM520634-18667 TGAAGCTGCCAGCATGATCTGA AGGTCATGCTGTAGTTTCATC up 0 1


Secondary structure

TAACTAAGGGCAGTGGTGCACCACAAGTTGGTGAAGCTGCCAGCATGATCTGATGATGATGATGATCCACCTCTCTCATCTGTGTTCTTGATTAATTACGGATCAATCGATCAGGTCATGCTGTAGTTTCATCTGCTGGTTGGGAGCACAGCAAAAAAAAA
-------------------------------TGAAGCTGCCAGCATGATCT 	5
-------------------------------TGAAGCTGCCAGCATGATCTGA 	402
-------------------------------TGAAGCTGCCAGCATGATCTG 	43


HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
48 Oryza sativa GSM520634-18667 TGAAGCTGCCAGCATGATCTGA AGATCATGCTGTGCAGTTTCATC up 0 1


Secondary structure

CCTTGATTGTTGAGGTGCAACCATTAGGAGCTGAAGCTGCCAGCATGATCTGATGAGTGCTTATTAGGTGAGGGCAGAATTGACTGCCAAAACAAAGATCAGATCATGCTGTGCAGTTTCATCTGCTTGTGGCTGCACAAAATTAAAGGGC
-------------------------------TGAAGCTGCCAGCATGATCT 	5
-------------------------------TGAAGCTGCCAGCATGATCTGA 	402
-------------------------------TGAAGCTGCCAGCATGATCTG 	43
----------------------------------------------------------------------------------------------------AGATCATGCTGTGCAGTTTCATCTG 	2

Overlaps with: MNEST050424
Overlaps with miRBase pre-miRNAs: osa-MIR167d
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
49 Oryza sativa GSM520634-18667 TGAAGCTGCCAGCATGATCTG GATCATGTTGCAGCTTCACT up 0 1


Secondary structure

GTTCTTGCTGGTGTGAGAGGCTGAAGCTGCCAGCATGATCTGGTCCATGAGTTGCACTGCTGAATATATTGAATTCAGCCAGGAGCTGCTACTGCAGTTCTGATCTCGATCTGCATTCGTTGTTCTGAGCTATGTATGGATTTGATCGGTTTGAAGGCATCCATGTCTTTAATTTCATCGATCAGATCATGTTGCAGCTTCACTCTCTCACTACCAGCAAAA
---------------------TGAAGCTGCCAGCATGATCT 	5
---------------------TGAAGCTGCCAGCATGATCTGG 	23
---------------------TGAAGCTGCCAGCATGATCTG 	43
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATCATGTTGCAGCTTCACT 	1

Overlaps with: MNEST041959 MNEST048867
Overlaps with miRBase pre-miRNAs: osa-MIR167i
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
50 Oryza sativa GSM520634-18667 TGAAGCTGCCAGCATGATCTG GATCATGTTGCAGCTTCACT up 0 1


Secondary structure

AGTTTTGCTGGTGTGAGAGAATGAAGCTGCCAGCATGATCTGGTTGTCAGGCATGAGCCAAATCTATCCATGGTGTTGGTGGTACTGAAATTACCGCGTTTTCGAGGTTTTTCGTCGTGTCAACTTGCGAAGGGAATTACGGGTTCTTGATGAGCATTGGTGATAGGAGGTGTGGGCTTGGTTAGTAGAGGTAGAATTATGATTGTTCTTGTGAGTTTCAGTAAGAGGTGGGAGTGATTGGAATTTGGCTCCATCAGATCATGTTGCAGCTTCACTCTCTCACCACCAACAA
-----------------AGAATGAAGCTGCCAGCATGATCTG 	1
---------------------TGAAGCTGCCAGCATGATCT 	5
---------------------TGAAGCTGCCAGCATGATCTGG 	23
---------------------TGAAGCTGCCAGCATGATCTG 	43
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATCATGTTGCAGCTTCACT 	1

Overlaps with: MNEST041955 MNEST048863
Overlaps with miRBase pre-miRNAs: osa-MIR167e
HuntMi prediction: true miRNA