miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: deep sequencing predictions



Please select library, species and/or miRNA sequence.


selected mature miRNA sequence: TGACCTGGGACTCGGACAGCTG

selected species: Homo sapiens



2 records found  

#specieslibrarymiRNAmiRNA*armmismatchesbulges
1 Homo sapiens GSM569185 TGACCTGGGACTCGGACAGCTG GCTGCTCGATCCACTGGTCCAG up 4 2


Secondary structure

TCACCTTCTCGCAGAGGCTCTTGACCTGGGACTCGGACAGCTGCTTGCACTCGTTCAGCTGCTCGATCCACTGGTCCAGCTCCTTGGTGAACACCTT
-----------------CTCTTGACCTGGGACTCGGAC 	1
---------------------TGACCTGGGACTCGGACAGCTG 	5
---------------------TGACCTGGGACTCGGACAGCTGC 	1
---------------------TGACCTGGGACTCGGACAGCT 	2
----------------------------------------------------------CTGCTCGATCCACTGGTCCAG 	1

Overlaps with: MNEST008011
Overlaps with miRBase pre-miRNAs: hsa-mir-3661
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
2 Homo sapiens GSM531982 TGACCTGGGACTCGGACAGCTG GCTGCTCGATCCACTGGTCCAG up 4 2


Secondary structure

TCACCTTCTCGCAGAGGCTCTTGACCTGGGACTCGGACAGCTGCTTGCACTCGTTCAGCTGCTCGATCCACTGGTCCAGCTCCTTGGTGAACACCTT
---------------------TGACCTGGGACTCGGACAGCTG 	6
---------------------TGACCTGGGACTCGGACAGCT 	1

Overlaps with: MNEST008011
Overlaps with miRBase pre-miRNAs: hsa-mir-3661
HuntMi prediction: true miRNA