miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: deep sequencing predictions



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selected mature miRNA sequence: TGACTAGAGCCTATTCTCTTCT

selected species: Caenorhabditis elegans



2 records found  

#specieslibrarymiRNAmiRNA*armmismatchesbulges
1 Caenorhabditis elegans GSM297751-9445 TGACTAGAGCCTATTCTCTTCT TAGAGAAAAGTTTCTAATTACC down 4 0


Secondary structure

AAATTACCAGCTATTTTCCAAGTAGAGAAAAGTTTCTAATTACCCATCATGCACAAATGTGGTGACTAGAGCCTATTCTCTTCTTGGAAAAGTGGCGACTCTT
----------------------TAGAGAAAAGTTTCTAATTACC 	13
--------------------------------------------------------------TGACTAGAGCCTATTCTCTTCT 	53
--------------------------------------------------------------TGACTAGAGCCTATTCTCTTC 	1

Overlaps with: MNEST038351
Overlaps with miRBase pre-miRNAs: cel-mir-247
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
2 Caenorhabditis elegans GSM297752-9446 TGACTAGAGCCTATTCTCTTCT TAGAGAAAAGTTTCTAATTACC down 4 0


Secondary structure

AAATTACCAGCTATTTTCCAAGTAGAGAAAAGTTTCTAATTACCCATCATGCACAAATGTGGTGACTAGAGCCTATTCTCTTCTTGGAAAAGTGGCGACTCTT
----------------------TAGAGAAAAGTTTCTAATTACC 	14
--------------------------------------------------------------TGACTAGAGCCTATTCTCTTCT 	62
--------------------------------------------------------------TGACTAGAGCCTATTCTCTTC 	1
-----------------------------------------------------------------CTAGAGCCTATTCTCTTCT 	1

Overlaps with: MNEST038351
Overlaps with miRBase pre-miRNAs: cel-mir-247
HuntMi prediction: true miRNA