miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: deep sequencing predictions



Please select library, species and/or miRNA sequence.


selected mature miRNA sequence: TGACTAGAGTTACACTCGTCA

selected species: Acyrthosiphon pisum



1 records found  

#specieslibrarymiRNAmiRNA*armmismatchesbulges
1 Acyrthosiphon pisum GSM502519_unique_quant TGACTAGAGTTACACTCGTCA ACGGGTGTAGTCTTTAGTGCACG down 1 2


Secondary structure

TCATAGCATTTAACGGGTGTAGTCTTTAGTGCACGTTAATATTTATAGTCGTGACTAGAGTTACACTCGTCAAATTCTAAA
-----------AACGGGTGTAGTCTTTAGTGCACG 	2
-----------AACGGGTGTAGTCTTTAGTGCA 	6
-----------AACGGGTGTAGTCTTTAGTGCACGT 	1
-----------AACGGGTGTAGTCTTTAGTGC 	1
---------------------------------------------------TGACTAGAGTTACACTCGTCA 	69
---------------------------------------------------TGACTAGAGTTACACTCGTC 	3
---------------------------------------------------TGACTAGAGTTACACTCGT 	1

Overlaps with: MNEST035095 MNEST035096
Overlaps with miRBase pre-miRNAs: api-mir-996
HuntMi prediction: true miRNA