miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: deep sequencing predictions



Please select library, species and/or miRNA sequence.


selected mature miRNA sequence: TGAGATGAAGCACTGTAGCTC

selected species: Homo sapiens



11 records found  

#specieslibrarymiRNAmiRNA*armmismatchesbulges
1 Homo sapiens GSM651905 TGAGATGAAGCACTGTAGCTC GGTGCAGTGCTGCATCTCTGG down 3 0


Secondary structure

GGAGCAGCGCAGCGCCCTGTCTCCCAGCCTGAGGTGCAGTGCTGCATCTCTGGTCAGTTGGGAGTCTGAGATGAAGCACTGTAGCTCAGGAAGAGAGAAGTTGTTCTGCAGCCATC
-------------------------------AGGTGCAGTGCTGCATCTCT 	3
--------------------------------GGTGCAGTGCTGCATCTCTGGTCA 	14
--------------------------------GGTGCAGTGCTGCATCTCTGG 	12
--------------------------------GGTGCAGTGCTGCATCTCT 	2667
--------------------------------GGTGCAGTGCTGCATCTCTG 	7
--------------------------------GGTGCAGTGCTGCATCTCTGGTCAGT 	1
--------------------------------GGTGCAGTGCTGCATCTCTGGT 	1
--------------------------------GGTGCAGTGCTGCATCTCTGGTC 	1
-----------------------------------------------------------GGGAGTCTGAGATGAAGCA 	1
----------------------------------------------------------------TCTGAGATGAAGCACTGTAGCTC 	8
----------------------------------------------------------------TCTGAGATGAAGCACTGTAGCT 	24
----------------------------------------------------------------TCTGAGATGAAGCACTGTAGC 	3
----------------------------------------------------------------TCTGAGATGAAGCACTGTA 	2
-----------------------------------------------------------------CTGAGATGAAGCACTGTAGCTC 	299
-----------------------------------------------------------------CTGAGATGAAGCACTGTAGCT 	311
-----------------------------------------------------------------CTGAGATGAAGCACTGTAGC 	39
-----------------------------------------------------------------CTGAGATGAAGCACTGTAGCTCA 	5
-----------------------------------------------------------------CTGAGATGAAGCACTGTAG 	4
------------------------------------------------------------------TGAGATGAAGCACTGTAGCTCAG 	9
------------------------------------------------------------------TGAGATGAAGCACTGTAGCTCA 	712
------------------------------------------------------------------TGAGATGAAGCACTGTAGCTC 	51477
------------------------------------------------------------------TGAGATGAAGCACTGTAGCT 	39279
------------------------------------------------------------------TGAGATGAAGCACTGTAGC 	3222
------------------------------------------------------------------TGAGATGAAGCACTGTAGCTCAGGA 	1
-------------------------------------------------------------------GAGATGAAGCACTGTAGCTC 	849
-------------------------------------------------------------------GAGATGAAGCACTGTAGCT 	406
-------------------------------------------------------------------GAGATGAAGCACTGTAGCTCA 	6
--------------------------------------------------------------------AGATGAAGCACTGTAGCTC 	157
--------------------------------------------------------------------AGATGAAGCACTGTAGCTCAGG 	2
--------------------------------------------------------------------AGATGAAGCACTGTAGCTCA 	2
-----------------------------------------------------------------------TGAAGCACTGTAGCTCAGGAA 	2
------------------------------------------------------------------------GAAGCACTGTAGCTCAGGAAGA 	1
-------------------------------------------------------------------------AAGCACTGTAGCTCAGGAAGA 	1
---------------------------------------------------------------------------------------AGGAAGAGAGAAGTTGTTC 	4
---------------------------------------------------------------------------------------AGGAAGAGAGAAGTTGTTCTGCAGCC 	1


Overlaps with: MNEST027577 MNEST028309 MNEST028463 MNEST030847
Overlaps with miRBase pre-miRNAs: cfa-mir-143 mmu-mir-143 lla-mir-143 hsa-mir-143 ggo-mir-143 ppy-mir-143
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
2 Homo sapiens GSM531974 TGAGATGAAGCACTGTAGCTC GGTGCAGTGCTGCATCTCTGG down 3 0


Secondary structure

GGAGCAGCGCAGCGCCCTGTCTCCCAGCCTGAGGTGCAGTGCTGCATCTCTGGTCAGTTGGGAGTCTGAGATGAAGCACTGTAGCTCAGGAAGAGAGAAGTTGTTCTGCAGCCATC
-------------------------------AGGTGCAGTGCTGCATCTCT 	12
-------------------------------AGGTGCAGTGCTGCATCTC 	1
--------------------------------GGTGCAGTGCTGCATCTCTGG 	15
--------------------------------GGTGCAGTGCTGCATCTCTG 	25
--------------------------------GGTGCAGTGCTGCATCTCT 	1173
--------------------------------GGTGCAGTGCTGCATCTCTGGT 	6
--------------------------------GGTGCAGTGCTGCATCTCTGGTCA 	2
--------------------------------GGTGCAGTGCTGCATCTCTGGTC 	1
---------------------------------------------------------------GTCTGAGATGAAGCACTGTAGCTC 	1
----------------------------------------------------------------TCTGAGATGAAGCACTGTAGCT 	4
----------------------------------------------------------------TCTGAGATGAAGCACTGTAGC 	3
----------------------------------------------------------------TCTGAGATGAAGCACTGTAGCTC 	2
-----------------------------------------------------------------CTGAGATGAAGCACTGTAGCTC 	24
-----------------------------------------------------------------CTGAGATGAAGCACTGTAGCT 	23
-----------------------------------------------------------------CTGAGATGAAGCACTGTAGCTCA 	2
------------------------------------------------------------------TGAGATGAAGCACTGTAGCTCA 	441
------------------------------------------------------------------TGAGATGAAGCACTGTAGCTC 	6184
------------------------------------------------------------------TGAGATGAAGCACTGTAGCT 	3324
------------------------------------------------------------------TGAGATGAAGCACTGTAGC 	192
------------------------------------------------------------------TGAGATGAAGCACTGTAGCTCAG 	3
-------------------------------------------------------------------GAGATGAAGCACTGTAGCTC 	19
-------------------------------------------------------------------GAGATGAAGCACTGTAGCT 	2
-------------------------------------------------------------------GAGATGAAGCACTGTAGCTCA 	1
--------------------------------------------------------------------AGATGAAGCACTGTAGCTC 	3


Overlaps with: MNEST027577 MNEST028309 MNEST028463 MNEST030847
Overlaps with miRBase pre-miRNAs: cfa-mir-143 mmu-mir-143 lla-mir-143 hsa-mir-143 ggo-mir-143 ppy-mir-143
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
3 Homo sapiens GSM494809_Normal_1 TGAGATGAAGCACTGTAGCTC GGTGCAGTGCTGCATCTCTGG down 3 0


Secondary structure

GGAGCAGCGCAGCGCCCTGTCTCCCAGCCTGAGGTGCAGTGCTGCATCTCTGGTCAGTTGGGAGTCTGAGATGAAGCACTGTAGCTCAGGAAGAGAGAAGTTGTTCTGCAGCCATC
------------------------------------------------------------------TGAGATGAAGCACTGTAGCTC 	46
------------------------------------------------------------------TGAGATGAAGCACTGTAGCT 	21
------------------------------------------------------------------TGAGATGAAGCACTGTAGCTCA 	4


Overlaps with: MNEST027577 MNEST028309 MNEST028463 MNEST030847
Overlaps with miRBase pre-miRNAs: cfa-mir-143 mmu-mir-143 lla-mir-143 hsa-mir-143 ggo-mir-143 ppy-mir-143
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
4 Homo sapiens GSM569187 TGAGATGAAGCACTGTAGCTC GGTGCAGTGCTGCATCTCTGG down 3 0


Secondary structure

GGAGCAGCGCAGCGCCCTGTCTCCCAGCCTGAGGTGCAGTGCTGCATCTCTGGTCAGTTGGGAGTCTGAGATGAAGCACTGTAGCTCAGGAAGAGAGAAGTTGTTCTGCAGCCATC
------------------------------------------------------------------TGAGATGAAGCACTGTAGCTC 	6
------------------------------------------------------------------TGAGATGAAGCACTGTAGCT 	5


Overlaps with: MNEST027577 MNEST028309 MNEST028463 MNEST030847
Overlaps with miRBase pre-miRNAs: cfa-mir-143 mmu-mir-143 lla-mir-143 hsa-mir-143 ggo-mir-143 ppy-mir-143
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
5 Homo sapiens GSM651908 TGAGATGAAGCACTGTAGCTC GGTGCAGTGCTGCATCTCTGG down 3 0


Secondary structure

GGAGCAGCGCAGCGCCCTGTCTCCCAGCCTGAGGTGCAGTGCTGCATCTCTGGTCAGTTGGGAGTCTGAGATGAAGCACTGTAGCTCAGGAAGAGAGAAGTTGTTCTGCAGCCATC
-------------------------------AGGTGCAGTGCTGCATCTCT 	2
--------------------------------GGTGCAGTGCTGCATCTCTGGTCA 	19
--------------------------------GGTGCAGTGCTGCATCTCT 	1462
--------------------------------GGTGCAGTGCTGCATCTCTGGTC 	7
--------------------------------GGTGCAGTGCTGCATCTCTGG 	4
--------------------------------GGTGCAGTGCTGCATCTCTGGT 	2
--------------------------------GGTGCAGTGCTGCATCTCTG 	2
----------------------------------------------------------TGGGAGTCTGAGATGAAGCAC 	1
----------------------------------------------------------------TCTGAGATGAAGCACTGTAGCT 	23
----------------------------------------------------------------TCTGAGATGAAGCACTGTAGCTC 	5
----------------------------------------------------------------TCTGAGATGAAGCACTGTAGC 	6
-----------------------------------------------------------------CTGAGATGAAGCACTGTAGCTC 	245
-----------------------------------------------------------------CTGAGATGAAGCACTGTAGCT 	262
-----------------------------------------------------------------CTGAGATGAAGCACTGTAGC 	30
-----------------------------------------------------------------CTGAGATGAAGCACTGTAGCTCA 	5
-----------------------------------------------------------------CTGAGATGAAGCACTGTAG 	4
------------------------------------------------------------------TGAGATGAAGCACTGTAGCTCAG 	11
------------------------------------------------------------------TGAGATGAAGCACTGTAGCTCA 	740
------------------------------------------------------------------TGAGATGAAGCACTGTAGCTC 	44990
------------------------------------------------------------------TGAGATGAAGCACTGTAGCT 	42197
------------------------------------------------------------------TGAGATGAAGCACTGTAGC 	2446
------------------------------------------------------------------TGAGATGAAGCACTGTAGCTCAGGAA 	1
-------------------------------------------------------------------GAGATGAAGCACTGTAGCTCA 	18
-------------------------------------------------------------------GAGATGAAGCACTGTAGCTC 	485
-------------------------------------------------------------------GAGATGAAGCACTGTAGCT 	277
--------------------------------------------------------------------AGATGAAGCACTGTAGCTC 	88
--------------------------------------------------------------------AGATGAAGCACTGTAGCTCAGG 	1
--------------------------------------------------------------------AGATGAAGCACTGTAGCTCA 	1
---------------------------------------------------------------------------------------AGGAAGAGAGAAGTTGTTCT 	2
---------------------------------------------------------------------------------------AGGAAGAGAGAAGTTGTTC 	2


Overlaps with: MNEST027577 MNEST028309 MNEST028463 MNEST030847
Overlaps with miRBase pre-miRNAs: cfa-mir-143 mmu-mir-143 lla-mir-143 hsa-mir-143 ggo-mir-143 ppy-mir-143
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
6 Homo sapiens GSM651906 TGAGATGAAGCACTGTAGCTC GGTGCAGTGCTGCATCTCTGG down 3 0


Secondary structure

GGAGCAGCGCAGCGCCCTGTCTCCCAGCCTGAGGTGCAGTGCTGCATCTCTGGTCAGTTGGGAGTCTGAGATGAAGCACTGTAGCTCAGGAAGAGAGAAGTTGTTCTGCAGCCATC
-------------------------------AGGTGCAGTGCTGCATCTCT 	6
--------------------------------GGTGCAGTGCTGCATCTCT 	915
--------------------------------GGTGCAGTGCTGCATCTCTGGTCA 	5
--------------------------------GGTGCAGTGCTGCATCTCTGG 	7
--------------------------------GGTGCAGTGCTGCATCTCTGGTC 	3
--------------------------------GGTGCAGTGCTGCATCTCTG 	3
--------------------------------GGTGCAGTGCTGCATCTCTGGTCAGT 	1
--------------------------------GGTGCAGTGCTGCATCTCTGGT 	1
---------------------------------------------------------------GTCTGAGATGAAGCACTGTAGCTC 	1
----------------------------------------------------------------TCTGAGATGAAGCACTGTAGCTC 	9
----------------------------------------------------------------TCTGAGATGAAGCACTGTAGCT 	18
----------------------------------------------------------------TCTGAGATGAAGCACTGTAGC 	2
-----------------------------------------------------------------CTGAGATGAAGCACTGTAGCTC 	180
-----------------------------------------------------------------CTGAGATGAAGCACTGTAGCT 	161
-----------------------------------------------------------------CTGAGATGAAGCACTGTAGC 	27
-----------------------------------------------------------------CTGAGATGAAGCACTGTAGCTCA 	3
-----------------------------------------------------------------CTGAGATGAAGCACTGTAG 	1
------------------------------------------------------------------TGAGATGAAGCACTGTAGCTCA 	421
------------------------------------------------------------------TGAGATGAAGCACTGTAGCTC 	26145
------------------------------------------------------------------TGAGATGAAGCACTGTAGCT 	23051
------------------------------------------------------------------TGAGATGAAGCACTGTAGC 	1658
------------------------------------------------------------------TGAGATGAAGCACTGTAGCTCAG 	6
-------------------------------------------------------------------GAGATGAAGCACTGTAGCTC 	322
-------------------------------------------------------------------GAGATGAAGCACTGTAGCT 	179
-------------------------------------------------------------------GAGATGAAGCACTGTAGCTCA 	4
--------------------------------------------------------------------AGATGAAGCACTGTAGCTC 	83
--------------------------------------------------------------------AGATGAAGCACTGTAGCTCA 	1
-----------------------------------------------------------------------TGAAGCACTGTAGCTCAGGAAGA 	2
---------------------------------------------------------------------------------------AGGAAGAGAGAAGTTGTTC 	3
---------------------------------------------------------------------------------------AGGAAGAGAGAAGTTGTTCTGCAG 	1
---------------------------------------------------------------------------------------AGGAAGAGAGAAGTTGTTCT 	1


Overlaps with: MNEST027577 MNEST028309 MNEST028463 MNEST030847
Overlaps with miRBase pre-miRNAs: cfa-mir-143 mmu-mir-143 lla-mir-143 hsa-mir-143 ggo-mir-143 ppy-mir-143
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
7 Homo sapiens GSM531982 TGAGATGAAGCACTGTAGCTC GGTGCAGTGCTGCATCTCTGG down 3 0


Secondary structure

GGAGCAGCGCAGCGCCCTGTCTCCCAGCCTGAGGTGCAGTGCTGCATCTCTGGTCAGTTGGGAGTCTGAGATGAAGCACTGTAGCTCAGGAAGAGAGAAGTTGTTCTGCAGCCATC
-------------------------------AGGTGCAGTGCTGCATCTCT 	5
--------------------------------GGTGCAGTGCTGCATCTCTGG 	6
--------------------------------GGTGCAGTGCTGCATCTCTG 	8
--------------------------------GGTGCAGTGCTGCATCTCT 	557
--------------------------------GGTGCAGTGCTGCATCTCTGGT 	4
--------------------------------GGTGCAGTGCTGCATCTCTGGTCA 	1
-------------------------------------------------------AGTTGGGAGTCTGAGATGAAGCA 	1
----------------------------------------------------------------TCTGAGATGAAGCACTGTAGCT 	2
----------------------------------------------------------------TCTGAGATGAAGCACTGTAG 	1
-----------------------------------------------------------------CTGAGATGAAGCACTGTAGCTC 	19
-----------------------------------------------------------------CTGAGATGAAGCACTGTAGCT 	9
------------------------------------------------------------------TGAGATGAAGCACTGTAGCTCA 	45
------------------------------------------------------------------TGAGATGAAGCACTGTAGCTC 	2001
------------------------------------------------------------------TGAGATGAAGCACTGTAGCT 	1441
------------------------------------------------------------------TGAGATGAAGCACTGTAGC 	69
-------------------------------------------------------------------GAGATGAAGCACTGTAGCTC 	15
-------------------------------------------------------------------GAGATGAAGCACTGTAGCT 	1
--------------------------------------------------------------------AGATGAAGCACTGTAGCTC 	1


Overlaps with: MNEST027577 MNEST028309 MNEST028463 MNEST030847
Overlaps with miRBase pre-miRNAs: cfa-mir-143 mmu-mir-143 lla-mir-143 hsa-mir-143 ggo-mir-143 ppy-mir-143
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
8 Homo sapiens GSM531978 TGAGATGAAGCACTGTAGCTC GGTGCAGTGCTGCATCTCTGG down 3 0


Secondary structure

GGAGCAGCGCAGCGCCCTGTCTCCCAGCCTGAGGTGCAGTGCTGCATCTCTGGTCAGTTGGGAGTCTGAGATGAAGCACTGTAGCTCAGGAAGAGAGAAGTTGTTCTGCAGCCATC
-------------------------------AGGTGCAGTGCTGCATCTCT 	40
-------------------------------AGGTGCAGTGCTGCATCTC 	3
--------------------------------GGTGCAGTGCTGCATCTCTGGTCA 	8
--------------------------------GGTGCAGTGCTGCATCTCTGGTC 	20
--------------------------------GGTGCAGTGCTGCATCTCTGGT 	20
--------------------------------GGTGCAGTGCTGCATCTCTGG 	153
--------------------------------GGTGCAGTGCTGCATCTCTG 	105
--------------------------------GGTGCAGTGCTGCATCTCT 	6783
----------------------------------------------------------------TCTGAGATGAAGCACTGTAGCTC 	32
----------------------------------------------------------------TCTGAGATGAAGCACTGTAGCT 	21
----------------------------------------------------------------TCTGAGATGAAGCACTGTAGC 	20
----------------------------------------------------------------TCTGAGATGAAGCACTGTA 	2
----------------------------------------------------------------TCTGAGATGAAGCACTGTAG 	1
-----------------------------------------------------------------CTGAGATGAAGCACTGTAGCTCA 	11
-----------------------------------------------------------------CTGAGATGAAGCACTGTAGCTC 	857
-----------------------------------------------------------------CTGAGATGAAGCACTGTAGCT 	242
-----------------------------------------------------------------CTGAGATGAAGCACTGTAGC 	32
-----------------------------------------------------------------CTGAGATGAAGCACTGTAG 	11
------------------------------------------------------------------TGAGATGAAGCACTGTAGCTCAG 	28
------------------------------------------------------------------TGAGATGAAGCACTGTAGCTCA 	6314
------------------------------------------------------------------TGAGATGAAGCACTGTAGCTC 	166590
------------------------------------------------------------------TGAGATGAAGCACTGTAGCT 	42825
------------------------------------------------------------------TGAGATGAAGCACTGTAGC 	2613
------------------------------------------------------------------TGAGATGAAGCACTGTAGCTCAGGA 	4
-------------------------------------------------------------------GAGATGAAGCACTGTAGCTCA 	17
-------------------------------------------------------------------GAGATGAAGCACTGTAGCTC 	640
-------------------------------------------------------------------GAGATGAAGCACTGTAGCT 	69
--------------------------------------------------------------------AGATGAAGCACTGTAGCTC 	138
--------------------------------------------------------------------AGATGAAGCACTGTAGCTCA 	4
--------------------------------------------------------------------AGATGAAGCACTGTAGCTCAGG 	2
-----------------------------------------------------------------------TGAAGCACTGTAGCTCAGGAAGA 	5
---------------------------------------------------------------------------------------AGGAAGAGAGAAGTTGTTCT 	2


Overlaps with: MNEST027577 MNEST028309 MNEST028463 MNEST030847
Overlaps with miRBase pre-miRNAs: cfa-mir-143 mmu-mir-143 lla-mir-143 hsa-mir-143 ggo-mir-143 ppy-mir-143
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
9 Homo sapiens GSM651907 TGAGATGAAGCACTGTAGCTC GGTGCAGTGCTGCATCTCTGG down 3 0


Secondary structure

GGAGCAGCGCAGCGCCCTGTCTCCCAGCCTGAGGTGCAGTGCTGCATCTCTGGTCAGTTGGGAGTCTGAGATGAAGCACTGTAGCTCAGGAAGAGAGAAGTTGTTCTGCAGCCATC
-------------------------------AGGTGCAGTGCTGCATCTCT 	5
--------------------------------GGTGCAGTGCTGCATCTCTGGTCA 	8
--------------------------------GGTGCAGTGCTGCATCTCTGG 	8
--------------------------------GGTGCAGTGCTGCATCTCTG 	7
--------------------------------GGTGCAGTGCTGCATCTCT 	2330
--------------------------------GGTGCAGTGCTGCATCTCTGGTC 	5
--------------------------------GGTGCAGTGCTGCATCTCTGGT 	5
------------------------------------------------------CAGTTGGGAGTCTGAGATGAAGCA 	1
----------------------------------------------------------------TCTGAGATGAAGCACTGTAGCTC 	7
----------------------------------------------------------------TCTGAGATGAAGCACTGTAGCT 	24
----------------------------------------------------------------TCTGAGATGAAGCACTGTA 	2
----------------------------------------------------------------TCTGAGATGAAGCACTGTAGC 	2
-----------------------------------------------------------------CTGAGATGAAGCACTGTAGCTC 	257
-----------------------------------------------------------------CTGAGATGAAGCACTGTAGCT 	195
-----------------------------------------------------------------CTGAGATGAAGCACTGTAGC 	25
-----------------------------------------------------------------CTGAGATGAAGCACTGTAGCTCA 	6
-----------------------------------------------------------------CTGAGATGAAGCACTGTAG 	1
------------------------------------------------------------------TGAGATGAAGCACTGTAGCTCAG 	9
------------------------------------------------------------------TGAGATGAAGCACTGTAGCTCA 	788
------------------------------------------------------------------TGAGATGAAGCACTGTAGCTC 	38910
------------------------------------------------------------------TGAGATGAAGCACTGTAGCT 	28465
------------------------------------------------------------------TGAGATGAAGCACTGTAGC 	1984
------------------------------------------------------------------TGAGATGAAGCACTGTAGCTCAGGAA 	2
------------------------------------------------------------------TGAGATGAAGCACTGTAGCTCAGGA 	2
-------------------------------------------------------------------GAGATGAAGCACTGTAGCTC 	495
-------------------------------------------------------------------GAGATGAAGCACTGTAGCT 	243
-------------------------------------------------------------------GAGATGAAGCACTGTAGCTCA 	2
--------------------------------------------------------------------AGATGAAGCACTGTAGCTC 	97
-----------------------------------------------------------------------TGAAGCACTGTAGCTCAGGAAGA 	1
---------------------------------------------------------------------------------------AGGAAGAGAGAAGTTGTTCT 	2
---------------------------------------------------------------------------------------AGGAAGAGAGAAGTTGTTC 	1


Overlaps with: MNEST027577 MNEST028309 MNEST028463 MNEST030847
Overlaps with miRBase pre-miRNAs: cfa-mir-143 mmu-mir-143 lla-mir-143 hsa-mir-143 ggo-mir-143 ppy-mir-143
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
10 Homo sapiens GSM494812_HL60 TGAGATGAAGCACTGTAGCTC GGTGCAGTGCTGCATCTCTGG down 3 0


Secondary structure

GGAGCAGCGCAGCGCCCTGTCTCCCAGCCTGAGGTGCAGTGCTGCATCTCTGGTCAGTTGGGAGTCTGAGATGAAGCACTGTAGCTCAGGAAGAGAGAAGTTGTTCTGCAGCCATC
--------------------------------GGTGCAGTGCTGCATCTCTGG 	1
--------------------------------GGTGCAGTGCTGCATCTCTGGT 	1
------------------------------------------------------------------TGAGATGAAGCACTGTAGCTCA 	5
------------------------------------------------------------------TGAGATGAAGCACTGTAGCTC 	43
------------------------------------------------------------------TGAGATGAAGCACTGTAGCT 	17
------------------------------------------------------------------TGAGATGAAGCACTGTAGC 	2


Overlaps with: MNEST027577 MNEST028309 MNEST028463 MNEST030847
Overlaps with miRBase pre-miRNAs: cfa-mir-143 mmu-mir-143 lla-mir-143 hsa-mir-143 ggo-mir-143 ppy-mir-143
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
11 Homo sapiens GSM531975 TGAGATGAAGCACTGTAGCTC GGTGCAGTGCTGCATCTCTGG down 3 0


Secondary structure

GGAGCAGCGCAGCGCCCTGTCTCCCAGCCTGAGGTGCAGTGCTGCATCTCTGGTCAGTTGGGAGTCTGAGATGAAGCACTGTAGCTCAGGAAGAGAGAAGTTGTTCTGCAGCCATC
-------------------------------AGGTGCAGTGCTGCATCTCT 	12
--------------------------------GGTGCAGTGCTGCATCTCTGG 	47
--------------------------------GGTGCAGTGCTGCATCTCTG 	36
--------------------------------GGTGCAGTGCTGCATCTCT 	2910
--------------------------------GGTGCAGTGCTGCATCTCTGGTCA 	4
--------------------------------GGTGCAGTGCTGCATCTCTGGT 	6
--------------------------------GGTGCAGTGCTGCATCTCTGGTC 	2
----------------------------------------------------------------TCTGAGATGAAGCACTGTAGCT 	7
----------------------------------------------------------------TCTGAGATGAAGCACTGTAGCTC 	5
----------------------------------------------------------------TCTGAGATGAAGCACTGTAGC 	4
-----------------------------------------------------------------CTGAGATGAAGCACTGTAGCTC 	89
-----------------------------------------------------------------CTGAGATGAAGCACTGTAGCT 	97
-----------------------------------------------------------------CTGAGATGAAGCACTGTAGC 	20
-----------------------------------------------------------------CTGAGATGAAGCACTGTAGCTCA 	4
-----------------------------------------------------------------CTGAGATGAAGCACTGTAG 	1
------------------------------------------------------------------TGAGATGAAGCACTGTAGCTCA 	502
------------------------------------------------------------------TGAGATGAAGCACTGTAGCTC 	7757
------------------------------------------------------------------TGAGATGAAGCACTGTAGCT 	5167
------------------------------------------------------------------TGAGATGAAGCACTGTAGC 	384
------------------------------------------------------------------TGAGATGAAGCACTGTAGCTCAG 	3
------------------------------------------------------------------TGAGATGAAGCACTGTAGCTCAGGA 	1
-------------------------------------------------------------------GAGATGAAGCACTGTAGCTC 	106
-------------------------------------------------------------------GAGATGAAGCACTGTAGCT 	34
-------------------------------------------------------------------GAGATGAAGCACTGTAGCTCA 	3
--------------------------------------------------------------------AGATGAAGCACTGTAGCTC 	20
--------------------------------------------------------------------AGATGAAGCACTGTAGCTCAGG 	1


Overlaps with: MNEST027577 MNEST028309 MNEST028463 MNEST030847
Overlaps with miRBase pre-miRNAs: cfa-mir-143 mmu-mir-143 lla-mir-143 hsa-mir-143 ggo-mir-143 ppy-mir-143
HuntMi prediction: true miRNA