miRNEST 2.0, an integrative microRNA resource :: deep sequencing predictions

miRNEST 2.0: an integrative microRNA resource

miRNEST 2.0, an integrative microRNA resource :: deep sequencing predictions

Please select library, species and/or miRNA sequence.

selected mature miRNA sequence: TGAGATTCTTCTATTCTACTTT

selected species: Drosophila melanogaster

18 records found

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
1	Drosophila melanogaster	GSM360257-14325	TGAGATTCTTCTATTCTACTTT	AAGTAGAATAGCAGGCTTATCACA	down	4	2

Secondary structure

CCACGATCGGCGTGTCTATGGCAAGTAGAATAGCAGGCTTATCACATGTTTAATTCAATCTGCTGTGAGATTCTTCTATTCTACTTTCGACAACACCCGTTAACAT
-----------------------AGTAGAATAGCAGGCTTATCACA 	4
-----------------------AGTAGAATAGCAGGCTTATC 	1
-----------------------AGTAGAATAGCAGGCTTATCAC 	1
-----------------------------------------------------------------TGAGATTCTTCTATTCTAC 	3
-----------------------------------------------------------------TGAGATTCTTCTATTCTACTTT 	287
-----------------------------------------------------------------TGAGATTCTTCTATTCTACTT 	5
-------------------------------------------------------------------AGATTCTTCTATTCTACTTT 	2
--------------------------------------------------------------------GATTCTTCTATTCTACTTT 	6

Overlaps with: MNEST036491 MNEST036492
Overlaps with miRBase pre-miRNAs: dme-mir-958
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
2	Drosophila melanogaster	GSM399107-16288	TGAGATTCTTCTATTCTACTTT	AAGTAGAATAGCAGGCTTATCACA	down	4	2

Secondary structure

CCACGATCGGCGTGTCTATGGCAAGTAGAATAGCAGGCTTATCACATGTTTAATTCAATCTGCTGTGAGATTCTTCTATTCTACTTTCGACAACACCCGTTAACAT
-----------------------AGTAGAATAGCAGGCTTATCACA 	119
-----------------------AGTAGAATAGCAGGCTTATCA 	42
-----------------------AGTAGAATAGCAGGCTTAT 	5
-----------------------AGTAGAATAGCAGGCTTATC 	3
-----------------------AGTAGAATAGCAGGCTTATCAC 	16
-------------------------TAGAATAGCAGGCTTATCAC 	3
-------------------------TAGAATAGCAGGCTTATCACATG 	1
-------------------------TAGAATAGCAGGCTTATCA 	11
-------------------------TAGAATAGCAGGCTTATCACA 	23
--------------------------AGAATAGCAGGCTTATCACATGT 	2
---------------------------GAATAGCAGGCTTATCACA 	1
----------------------------------------------TGTTTAATTCAATCTGCTG 	3
---------------------------------------------------------------TGTGAGATTCTTCTATTCTACT 	1
-----------------------------------------------------------------TGAGATTCTTCTATTCTAC 	9
-----------------------------------------------------------------TGAGATTCTTCTATTCTACTTT 	7350
-----------------------------------------------------------------TGAGATTCTTCTATTCTACT 	33
-----------------------------------------------------------------TGAGATTCTTCTATTCTACTT 	247
-----------------------------------------------------------------TGAGATTCTTCTATTCTACTTTC 	5
------------------------------------------------------------------GAGATTCTTCTATTCTACTT 	1
------------------------------------------------------------------GAGATTCTTCTATTCTACTTT 	13
-------------------------------------------------------------------AGATTCTTCTATTCTACTTT 	13
--------------------------------------------------------------------GATTCTTCTATTCTACTTT 	3

Overlaps with: MNEST036491 MNEST036492
Overlaps with miRBase pre-miRNAs: dme-mir-958
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
3	Drosophila melanogaster	GSM399106-16287	TGAGATTCTTCTATTCTACTTT	AAGTAGAATAGCAGGCTTATCACA	down	4	2

Secondary structure

CCACGATCGGCGTGTCTATGGCAAGTAGAATAGCAGGCTTATCACATGTTTAATTCAATCTGCTGTGAGATTCTTCTATTCTACTTTCGACAACACCCGTTAACAT
-----------------------AGTAGAATAGCAGGCTTATCACA 	160
-----------------------AGTAGAATAGCAGGCTTATCA 	32
-----------------------AGTAGAATAGCAGGCTTATCAC 	21
-----------------------AGTAGAATAGCAGGCTTAT 	5
-----------------------AGTAGAATAGCAGGCTTATCACATG 	1
-----------------------AGTAGAATAGCAGGCTTATC 	4
------------------------GTAGAATAGCAGGCTTATCACA 	4
-------------------------TAGAATAGCAGGCTTATCA 	1
-------------------------TAGAATAGCAGGCTTATCAC 	3
-------------------------TAGAATAGCAGGCTTATCACAT 	1
-------------------------TAGAATAGCAGGCTTATCACA 	14
----------------------------------------------TGTTTAATTCAATCTGCTG 	1
-----------------------------------------------------------CTGCTGTGAGATTCTTCTATTCTAC 	1
---------------------------------------------------------------TGTGAGATTCTTCTATTCTACT 	1
-----------------------------------------------------------------TGAGATTCTTCTATTCTAC 	13
-----------------------------------------------------------------TGAGATTCTTCTATTCTACTTT 	4849
-----------------------------------------------------------------TGAGATTCTTCTATTCTACT 	25
-----------------------------------------------------------------TGAGATTCTTCTATTCTACTT 	189
------------------------------------------------------------------GAGATTCTTCTATTCTACTTT 	12
-------------------------------------------------------------------AGATTCTTCTATTCTACTTT 	7
--------------------------------------------------------------------GATTCTTCTATTCTACTTT 	1

Overlaps with: MNEST036491 MNEST036492
Overlaps with miRBase pre-miRNAs: dme-mir-958
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
4	Drosophila melanogaster	GSM466487_wt_total	TGAGATTCTTCTATTCTACTTT	AAGTAGAATAGCAGGCTTATCACA	down	4	2

Secondary structure

CCACGATCGGCGTGTCTATGGCAAGTAGAATAGCAGGCTTATCACATGTTTAATTCAATCTGCTGTGAGATTCTTCTATTCTACTTTCGACAACACCCGTTAACAT
-----------------------AGTAGAATAGCAGGCTTATCACA 	7
-----------------------AGTAGAATAGCAGGCTTATCA 	1
-----------------------AGTAGAATAGCAGGCTTAT 	1
-----------------------------------------------------------------TGAGATTCTTCTATTCTACTTT 	442
-----------------------------------------------------------------TGAGATTCTTCTATTCTACT 	3
-----------------------------------------------------------------TGAGATTCTTCTATTCTAC 	1
-----------------------------------------------------------------TGAGATTCTTCTATTCTACTT 	38
------------------------------------------------------------------GAGATTCTTCTATTCTACTT 	1
------------------------------------------------------------------GAGATTCTTCTATTCTACTTT 	5
-------------------------------------------------------------------AGATTCTTCTATTCTACTTT 	1
--------------------------------------------------------------------GATTCTTCTATTCTACTTT 	1

Overlaps with: MNEST036491 MNEST036492
Overlaps with miRBase pre-miRNAs: dme-mir-958
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
5	Drosophila melanogaster	GSM399105-16286	TGAGATTCTTCTATTCTACTTT	AAGTAGAATAGCAGGCTTATCACA	down	4	2

Secondary structure

CCACGATCGGCGTGTCTATGGCAAGTAGAATAGCAGGCTTATCACATGTTTAATTCAATCTGCTGTGAGATTCTTCTATTCTACTTTCGACAACACCCGTTAACAT
-----------------------AGTAGAATAGCAGGCTTATCACA 	40
-----------------------AGTAGAATAGCAGGCTTATCA 	10
-----------------------AGTAGAATAGCAGGCTTAT 	1
-----------------------AGTAGAATAGCAGGCTTATCAC 	12
-------------------------TAGAATAGCAGGCTTATCA 	1
-------------------------TAGAATAGCAGGCTTATCACA 	1
----------------------------------------------TGTTTAATTCAATCTGCTG 	1
-----------------------------------------------------------------TGAGATTCTTCTATTCTACTTT 	1736
-----------------------------------------------------------------TGAGATTCTTCTATTCTACTT 	31
-----------------------------------------------------------------TGAGATTCTTCTATTCTACT 	4
-----------------------------------------------------------------TGAGATTCTTCTATTCTACTTTC 	1
------------------------------------------------------------------GAGATTCTTCTATTCTACTTT 	2
-------------------------------------------------------------------AGATTCTTCTATTCTACTTT 	1

Overlaps with: MNEST036491 MNEST036492
Overlaps with miRBase pre-miRNAs: dme-mir-958
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
6	Drosophila melanogaster	GSM360262-14327	TGAGATTCTTCTATTCTACTTT	AAGTAGAATAGCAGGCTTATCACA	down	4	2

Secondary structure

CCACGATCGGCGTGTCTATGGCAAGTAGAATAGCAGGCTTATCACATGTTTAATTCAATCTGCTGTGAGATTCTTCTATTCTACTTTCGACAACACCCGTTAACAT
-----------------------AGTAGAATAGCAGGCTTATCACA 	251
-----------------------AGTAGAATAGCAGGCTTATCA 	25
-----------------------AGTAGAATAGCAGGCTTAT 	4
-----------------------AGTAGAATAGCAGGCTTATC 	2
-----------------------AGTAGAATAGCAGGCTTATCAC 	32
------------------------GTAGAATAGCAGGCTTATCACA 	12
------------------------GTAGAATAGCAGGCTTATCAC 	6
-------------------------TAGAATAGCAGGCTTATCACA 	22
---------------------------GAATAGCAGGCTTATCACA 	3
----------------------------------------------TGTTTAATTCAATCTGCTG 	2
---------------------------------------------------------------TGTGAGATTCTTCTATTCTACT 	1
-----------------------------------------------------------------TGAGATTCTTCTATTCTAC 	4
-----------------------------------------------------------------TGAGATTCTTCTATTCTACTTT 	3644
-----------------------------------------------------------------TGAGATTCTTCTATTCTACT 	15
-----------------------------------------------------------------TGAGATTCTTCTATTCTACTT 	205
------------------------------------------------------------------GAGATTCTTCTATTCTACTTT 	6
-------------------------------------------------------------------AGATTCTTCTATTCTACTTT 	1

Overlaps with: MNEST036491 MNEST036492
Overlaps with miRBase pre-miRNAs: dme-mir-958
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
7	Drosophila melanogaster	GSM360256-14324	TGAGATTCTTCTATTCTACTTT	AAGTAGAATAGCAGGCTTATCACA	down	4	2

Secondary structure

CCACGATCGGCGTGTCTATGGCAAGTAGAATAGCAGGCTTATCACATGTTTAATTCAATCTGCTGTGAGATTCTTCTATTCTACTTTCGACAACACCCGTTAACAT
-----------------------AGTAGAATAGCAGGCTTATCACA 	13
-----------------------AGTAGAATAGCAGGCTTATCA 	1
-------------------------TAGAATAGCAGGCTTATCAC 	1
-------------------------TAGAATAGCAGGCTTATCACA 	5
-----------------------------------------------------------------TGAGATTCTTCTATTCTAC 	1
-----------------------------------------------------------------TGAGATTCTTCTATTCTACTTT 	590
-----------------------------------------------------------------TGAGATTCTTCTATTCTACTT 	8
-------------------------------------------------------------------AGATTCTTCTATTCTACTTT 	3
--------------------------------------------------------------------GATTCTTCTATTCTACTTT 	5

Overlaps with: MNEST036491 MNEST036492
Overlaps with miRBase pre-miRNAs: dme-mir-958
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
8	Drosophila melanogaster	GSM466496_r2d2_homozygotes_untreated	TGAGATTCTTCTATTCTACTTT	AAGTAGAATAGCAGGCTTATCACA	down	4	2

Secondary structure

CCACGATCGGCGTGTCTATGGCAAGTAGAATAGCAGGCTTATCACATGTTTAATTCAATCTGCTGTGAGATTCTTCTATTCTACTTTCGACAACACCCGTTAACAT
-----------------------AGTAGAATAGCAGGCTTATCACA 	4
----------------------------------------------TGTTTAATTCAATCTGCTG 	1
-----------------------------------------------------------------TGAGATTCTTCTATTCTACTTT 	79
-----------------------------------------------------------------TGAGATTCTTCTATTCTACT 	4
-----------------------------------------------------------------TGAGATTCTTCTATTCTAC 	1
-----------------------------------------------------------------TGAGATTCTTCTATTCTACTT 	14
------------------------------------------------------------------GAGATTCTTCTATTCTACTTT 	1

Overlaps with: MNEST036491 MNEST036492
Overlaps with miRBase pre-miRNAs: dme-mir-958
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
9	Drosophila melanogaster	GSM385821-16268	TGAGATTCTTCTATTCTACTTT	AAGTAGAATAGCAGGCTTATCACA	down	4	2

Secondary structure

CCACGATCGGCGTGTCTATGGCAAGTAGAATAGCAGGCTTATCACATGTTTAATTCAATCTGCTGTGAGATTCTTCTATTCTACTTTCGACAACACCCGTTAACAT
-----------------------------------------------------------------TGAGATTCTTCTATTCTACTTT 	7

Overlaps with: MNEST036491 MNEST036492
Overlaps with miRBase pre-miRNAs: dme-mir-958
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
10	Drosophila melanogaster	GSM286605-9793	TGAGATTCTTCTATTCTACTTT	AAGTAGAATAGCAGGCTTATCACA	down	4	2

Secondary structure

CCACGATCGGCGTGTCTATGGCAAGTAGAATAGCAGGCTTATCACATGTTTAATTCAATCTGCTGTGAGATTCTTCTATTCTACTTTCGACAACACCCGTTAACAT
-----------------------AGTAGAATAGCAGGCTTATCACA 	76
-----------------------AGTAGAATAGCAGGCTTATCA 	1
-----------------------AGTAGAATAGCAGGCTTATCAC 	4
-------------------------TAGAATAGCAGGCTTATCACA 	3
-----------------------------------------------------------------TGAGATTCTTCTATTCTACTTT 	619
-----------------------------------------------------------------TGAGATTCTTCTATTCTACT 	4
-----------------------------------------------------------------TGAGATTCTTCTATTCTACTT 	11

Overlaps with: MNEST036491 MNEST036492
Overlaps with miRBase pre-miRNAs: dme-mir-958
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
11	Drosophila melanogaster	GSM360260-14326	TGAGATTCTTCTATTCTACTTT	AAGTAGAATAGCAGGCTTATCACA	down	4	2

Secondary structure

CCACGATCGGCGTGTCTATGGCAAGTAGAATAGCAGGCTTATCACATGTTTAATTCAATCTGCTGTGAGATTCTTCTATTCTACTTTCGACAACACCCGTTAACAT
-----------------------AGTAGAATAGCAGGCTTATCACA 	85
-----------------------AGTAGAATAGCAGGCTTATCA 	3
-----------------------AGTAGAATAGCAGGCTTAT 	2
-----------------------AGTAGAATAGCAGGCTTATCAC 	6
------------------------GTAGAATAGCAGGCTTATCACA 	2
-------------------------TAGAATAGCAGGCTTATCACA 	7
-----------------------------------------------------------------TGAGATTCTTCTATTCTACTTT 	917
-----------------------------------------------------------------TGAGATTCTTCTATTCTACT 	3
-----------------------------------------------------------------TGAGATTCTTCTATTCTACTT 	38
------------------------------------------------------------------GAGATTCTTCTATTCTACTT 	2
------------------------------------------------------------------GAGATTCTTCTATTCTACTTT 	1
-------------------------------------------------------------------AGATTCTTCTATTCTACTTT 	2
--------------------------------------------------------------------GATTCTTCTATTCTACTTT 	2

Overlaps with: MNEST036491 MNEST036492
Overlaps with miRBase pre-miRNAs: dme-mir-958
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
12	Drosophila melanogaster	GSM322543-14323	TGAGATTCTTCTATTCTACTTT	AAGTAGAATAGCAGGCTTATCACA	down	4	2

Secondary structure

CCACGATCGGCGTGTCTATGGCAAGTAGAATAGCAGGCTTATCACATGTTTAATTCAATCTGCTGTGAGATTCTTCTATTCTACTTTCGACAACACCCGTTAACAT
-----------------------AGTAGAATAGCAGGCTTATCACA 	13
-----------------------AGTAGAATAGCAGGCTTATCAC 	7
-----------------------------------------------------------------TGAGATTCTTCTATTCTACT 	4
-----------------------------------------------------------------TGAGATTCTTCTATTCTACTT 	17
-----------------------------------------------------------------TGAGATTCTTCTATTCTACTTT 	290
------------------------------------------------------------------GAGATTCTTCTATTCTACTTT 	3

Overlaps with: MNEST036491 MNEST036492
Overlaps with miRBase pre-miRNAs: dme-mir-958
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
13	Drosophila melanogaster	GSM286607-9796	TGAGATTCTTCTATTCTACTTT	AAGTAGAATAGCAGGCTTATCACA	down	4	2

Secondary structure

CCACGATCGGCGTGTCTATGGCAAGTAGAATAGCAGGCTTATCACATGTTTAATTCAATCTGCTGTGAGATTCTTCTATTCTACTTTCGACAACACCCGTTAACAT
-----------------------AGTAGAATAGCAGGCTTATCACA 	650
-----------------------AGTAGAATAGCAGGCTTATCA 	15
-----------------------AGTAGAATAGCAGGCTTAT 	6
-----------------------AGTAGAATAGCAGGCTTATCAC 	21
------------------------GTAGAATAGCAGGCTTATCACA 	8
------------------------GTAGAATAGCAGGCTTATCA 	2
-------------------------TAGAATAGCAGGCTTATCACA 	29
-----------------------------------------------------------------TGAGATTCTTCTATTCTACTTT 	976
-----------------------------------------------------------------TGAGATTCTTCTATTCTACTTTCG 	1
-----------------------------------------------------------------TGAGATTCTTCTATTCTACTT 	5

Overlaps with: MNEST036491 MNEST036492
Overlaps with miRBase pre-miRNAs: dme-mir-958
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
14	Drosophila melanogaster	GSM286604-9792	TGAGATTCTTCTATTCTACTTT	AAGTAGAATAGCAGGCTTATCACA	down	4	2

Secondary structure

CCACGATCGGCGTGTCTATGGCAAGTAGAATAGCAGGCTTATCACATGTTTAATTCAATCTGCTGTGAGATTCTTCTATTCTACTTTCGACAACACCCGTTAACAT
-----------------------AGTAGAATAGCAGGCTTATCACA 	55
-----------------------AGTAGAATAGCAGGCTTATCA 	22
-----------------------AGTAGAATAGCAGGCTTATCAC 	13
------------------------GTAGAATAGCAGGCTTATCACA 	4
-------------------------TAGAATAGCAGGCTTATCACA 	9
-----------------------------------------------------------------TGAGATTCTTCTATTCTAC 	7
-----------------------------------------------------------------TGAGATTCTTCTATTCTACTTT 	4602
-----------------------------------------------------------------TGAGATTCTTCTATTCTACTT 	268
-----------------------------------------------------------------TGAGATTCTTCTATTCTACT 	10
-----------------------------------------------------------------TGAGATTCTTCTATTCTACTTTC 	5
------------------------------------------------------------------GAGATTCTTCTATTCTACTT 	1
------------------------------------------------------------------GAGATTCTTCTATTCTACTTT 	18
-------------------------------------------------------------------AGATTCTTCTATTCTACTTT 	8
--------------------------------------------------------------------GATTCTTCTATTCTACTTT 	4

Overlaps with: MNEST036491 MNEST036492
Overlaps with miRBase pre-miRNAs: dme-mir-958
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
15	Drosophila melanogaster	GSM322208-14317	TGAGATTCTTCTATTCTACTTT	AAGTAGAATAGCAGGCTTATCACA	down	4	2

Secondary structure

CCACGATCGGCGTGTCTATGGCAAGTAGAATAGCAGGCTTATCACATGTTTAATTCAATCTGCTGTGAGATTCTTCTATTCTACTTTCGACAACACCCGTTAACAT
-----------------------AGTAGAATAGCAGGCTTATCACA 	89
-----------------------AGTAGAATAGCAGGCTTATCA 	21
-----------------------AGTAGAATAGCAGGCTTATCACATGT 	1
-----------------------AGTAGAATAGCAGGCTTATCAC 	29
-----------------------AGTAGAATAGCAGGCTTAT 	3
-----------------------AGTAGAATAGCAGGCTTATCACATG 	2
-----------------------AGTAGAATAGCAGGCTTATC 	1
------------------------GTAGAATAGCAGGCTTATC 	1
-------------------------TAGAATAGCAGGCTTATCA 	1
-------------------------TAGAATAGCAGGCTTATCACA 	5
----------------------------------------------TGTTTAATTCAATCTGCTG 	1
-----------------------------------------------------------------TGAGATTCTTCTATTCTAC 	109
-----------------------------------------------------------------TGAGATTCTTCTATTCTACTTT 	2181
-----------------------------------------------------------------TGAGATTCTTCTATTCTACTT 	439
-----------------------------------------------------------------TGAGATTCTTCTATTCTACT 	198
-----------------------------------------------------------------TGAGATTCTTCTATTCTACTTTCGA 	3
-----------------------------------------------------------------TGAGATTCTTCTATTCTACTTTC 	33
-----------------------------------------------------------------TGAGATTCTTCTATTCTACTTTCG 	5
------------------------------------------------------------------GAGATTCTTCTATTCTACTTTC 	1
------------------------------------------------------------------GAGATTCTTCTATTCTACTT 	2
------------------------------------------------------------------GAGATTCTTCTATTCTACTTT 	6
-------------------------------------------------------------------AGATTCTTCTATTCTACTTT 	6
--------------------------------------------------------------------GATTCTTCTATTCTACTTT 	4

Overlaps with: MNEST036491 MNEST036492
Overlaps with miRBase pre-miRNAs: dme-mir-958
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
16	Drosophila melanogaster	GSM385748-16264	TGAGATTCTTCTATTCTACTTT	AAGTAGAATAGCAGGCTTATCACA	down	4	2

Secondary structure

CCACGATCGGCGTGTCTATGGCAAGTAGAATAGCAGGCTTATCACATGTTTAATTCAATCTGCTGTGAGATTCTTCTATTCTACTTTCGACAACACCCGTTAACAT
-----------------------------------------------------------------TGAGATTCTTCTATTCTACTTT 	5

Overlaps with: MNEST036491 MNEST036492
Overlaps with miRBase pre-miRNAs: dme-mir-958
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
17	Drosophila melanogaster	GSM399110-16285	TGAGATTCTTCTATTCTACTTT	AAGTAGAATAGCAGGCTTATCACA	down	4	2

Secondary structure

CCACGATCGGCGTGTCTATGGCAAGTAGAATAGCAGGCTTATCACATGTTTAATTCAATCTGCTGTGAGATTCTTCTATTCTACTTTCGACAACACCCGTTAACAT
-----------------------------------------------------------------TGAGATTCTTCTATTCTACTTT 	47
-----------------------------------------------------------------TGAGATTCTTCTATTCTACTT 	1
-------------------------------------------------------------------AGATTCTTCTATTCTACTTT 	1

Overlaps with: MNEST036491 MNEST036492
Overlaps with miRBase pre-miRNAs: dme-mir-958
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
18	Drosophila melanogaster	GSM466492_dcr-2_homozygotes_untreated	TGAGATTCTTCTATTCTACTTT	AAGTAGAATAGCAGGCTTATCACA	down	4	2

Secondary structure

CCACGATCGGCGTGTCTATGGCAAGTAGAATAGCAGGCTTATCACATGTTTAATTCAATCTGCTGTGAGATTCTTCTATTCTACTTTCGACAACACCCGTTAACAT
-----------------------AGTAGAATAGCAGGCTTATCACA 	6
-----------------------AGTAGAATAGCAGGCTTATCA 	2
-----------------------AGTAGAATAGCAGGCTTAT 	1
-----------------------AGTAGAATAGCAGGCTTATCAC 	1
-----------------------------------------------------------------TGAGATTCTTCTATTCTACT 	4
-----------------------------------------------------------------TGAGATTCTTCTATTCTACTT 	30
-----------------------------------------------------------------TGAGATTCTTCTATTCTACTTT 	255
------------------------------------------------------------------GAGATTCTTCTATTCTACTTT 	4
--------------------------------------------------------------------GATTCTTCTATTCTACTTT 	1

Overlaps with: MNEST036491 MNEST036492
Overlaps with miRBase pre-miRNAs: dme-mir-958
HuntMi prediction: true miRNA