miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: deep sequencing predictions



Please select library, species and/or miRNA sequence.


selected mature miRNA sequence: TGAGGCACGAGGCGGCTCTGA

selected species: Bombyx mori



1 records found  

#specieslibrarymiRNAmiRNA*armmismatchesbulges
1 Bombyx mori GSM449726_Anterior_silkgland_clean TGAGGCACGAGGCGGCTCTGA AGAGTCACCTAGTACCTGAGG up 4 0


Secondary structure

NNNNNNNNNNNNNNNGGCGGACGTGTCGGCGGAGCCCGCGCTGAGGCACGAGGCGGCTCTGAGACCGGCACCACTCAGAGTCACCTAGTACCTGAGGCGGCCGCCCGCCTCCGTCTCCCGCGGCGACGAGTTCCA
---------------------------------------GCTGAGGCACGAGGCGGCTCTGA 	1
----------------------------------------CTGAGGCACGAGGCGGCTCTGA 	1
-----------------------------------------TGAGGCACGAGGCGGCTCTGAG 	11
-----------------------------------------TGAGGCACGAGGCGGCTCTGA 	14
-----------------------------------------TGAGGCACGAGGCGGCTCTGAGA 	1
-----------------------------------------TGAGGCACGAGGCGGCTCTG 	1
------------------------------------------GAGGCACGAGGCGGCTCTGA 	1

Overlaps with: MNEST035563
Overlaps with miRBase pre-miRNAs: bmo-mir-306b
HuntMi prediction: not a miRNA