miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: deep sequencing predictions



Please select library, species and/or miRNA sequence.


selected mature miRNA sequence: TGAGGTAGTAGGTTGTATAGT

selected species: Drosophila melanogaster



26 records found  

#specieslibrarymiRNAmiRNA*armmismatchesbulges
1 Drosophila melanogaster GSM360257-14325 TGAGGTAGTAGGTTGTATAGT TATACAATGTGCTAGCTTTCT up 3 0


Secondary structure

ACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTAGTAATTACACATCATACTATACAATGTGCTAGCTTTCTTTGCTTGACTACAAGCCG
---------------------TGAGGTAGTAGGTTGTATAGT 	7
---------------------TGAGGTAGTAGGTTGTATAGTA 	7

Overlaps with: MNEST036151 MNEST036317 MNEST036318 MNEST037110 MNEST037189 MNEST037479
Overlaps with miRBase pre-miRNAs: dsi-let-7 dse-let-7 der-let-7 dya-let-7 dme-let-7
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
2 Drosophila melanogaster GSM360257-14325 TGAGGTAGTAGGTTGTATAGTA CTATACAATGTGCTAGCTTTCT up 3 0


Secondary structure

ACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTAGTAATTACACATCATACTATACAATGTGCTAGCTTTCTTTGCTTGACTACAAGCCG
---------------------TGAGGTAGTAGGTTGTATAGT 	7
---------------------TGAGGTAGTAGGTTGTATAGTA 	7

Overlaps with: MNEST036151 MNEST036317 MNEST036318 MNEST037110 MNEST037189 MNEST037479
Overlaps with miRBase pre-miRNAs: dsi-let-7 dse-let-7 der-let-7 dya-let-7 dme-let-7
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
3 Drosophila melanogaster GSM399107-16288 TGAGGTAGTAGGTTGTATAGT TATACAATGTGCTAGCTTTCT up 3 0


Secondary structure

ACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTAGTAATTACACATCATACTATACAATGTGCTAGCTTTCTTTGCTTGACTACAAGCCG
ACCTTTTTCTCTCTGGCAAAT 	1
--CTTTTTCTCTCTGGCAAAT 	2
--------------------TTGAGGTAGTAGGTTGTATAG 	1
---------------------TGAGGTAGTAGGTTGTATAGT 	13103
---------------------TGAGGTAGTAGGTTGTATAGTAG 	7
---------------------TGAGGTAGTAGGTTGTATA 	266
---------------------TGAGGTAGTAGGTTGTATAGTA 	2654
---------------------TGAGGTAGTAGGTTGTATAG 	2872
----------------------GAGGTAGTAGGTTGTATAGT 	20
----------------------GAGGTAGTAGGTTGTATAGTA 	1
----------------------GAGGTAGTAGGTTGTATAG 	3
-----------------------AGGTAGTAGGTTGTATAGT 	1
-----------------------AGGTAGTAGGTTGTATAGTA 	1
------------------------GGTAGTAGGTTGTATAGTA 	2
----------------------------------------------------------ACTATACAATGTGCTAGCTTTCT 	1
-----------------------------------------------------------CTATACAATGTGCTAGCTT 	1
-----------------------------------------------------------CTATACAATGTGCTAGCTTTCTT 	2
-----------------------------------------------------------CTATACAATGTGCTAGCTTTCT 	147
-----------------------------------------------------------CTATACAATGTGCTAGCTTTC 	15
-----------------------------------------------------------CTATACAATGTGCTAGCTTT 	3
------------------------------------------------------------TATACAATGTGCTAGCTTTCT 	1

Overlaps with: MNEST036151 MNEST036317 MNEST036318 MNEST037110 MNEST037189 MNEST037479
Overlaps with miRBase pre-miRNAs: dsi-let-7 dse-let-7 der-let-7 dya-let-7 dme-let-7
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
4 Drosophila melanogaster GSM399106-16287 TGAGGTAGTAGGTTGTATAGT TATACAATGTGCTAGCTTTCT up 3 0


Secondary structure

ACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTAGTAATTACACATCATACTATACAATGTGCTAGCTTTCTTTGCTTGACTACAAGCCG
-CCTTTTTCTCTCTGGCAAAT 	1
--------------------TTGAGGTAGTAGGTTGTATAG 	1
---------------------TGAGGTAGTAGGTTGTATAGT 	5023
---------------------TGAGGTAGTAGGTTGTATAGTAG 	2
---------------------TGAGGTAGTAGGTTGTATA 	131
---------------------TGAGGTAGTAGGTTGTATAGTA 	1060
---------------------TGAGGTAGTAGGTTGTATAG 	1669
----------------------GAGGTAGTAGGTTGTATAGT 	12
----------------------GAGGTAGTAGGTTGTATAG 	2
----------------------GAGGTAGTAGGTTGTATAGTA 	2
-----------------------------------------------------------CTATACAATGTGCTAGCTTTCT 	83
-----------------------------------------------------------CTATACAATGTGCTAGCTTTC 	7
-----------------------------------------------------------CTATACAATGTGCTAGCTTTCTT 	2

Overlaps with: MNEST036151 MNEST036317 MNEST036318 MNEST037110 MNEST037189 MNEST037479
Overlaps with miRBase pre-miRNAs: dsi-let-7 dse-let-7 der-let-7 dya-let-7 dme-let-7
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
5 Drosophila melanogaster GSM466487_wt_total TGAGGTAGTAGGTTGTATAGT TATACAATGTGCTAGCTTTCT up 3 0


Secondary structure

ACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTAGTAATTACACATCATACTATACAATGTGCTAGCTTTCTTTGCTTGACTACAAGCCG
---------------------TGAGGTAGTAGGTTGTATAGT 	13824
---------------------TGAGGTAGTAGGTTGTATAGTAG 	8
---------------------TGAGGTAGTAGGTTGTATAGTA 	3877
---------------------TGAGGTAGTAGGTTGTATAG 	5057
-----------------------------------------------------------CTATACAATGTGCTAGCTTTC 	31
-----------------------------------------------------------CTATACAATGTGCTAGCTTTCTT 	1
-----------------------------------------------------------CTATACAATGTGCTAGCTTTCT 	258
-----------------------------------------------------------CTATACAATGTGCTAGCTTT 	1
------------------------------------------------------------TATACAATGTGCTAGCTTTCT 	4

Overlaps with: MNEST036151 MNEST036317 MNEST036318 MNEST037110 MNEST037189 MNEST037479
Overlaps with miRBase pre-miRNAs: dsi-let-7 dse-let-7 der-let-7 dya-let-7 dme-let-7
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
6 Drosophila melanogaster GSM399105-16286 TGAGGTAGTAGGTTGTATAGTA CTATACAATGTGCTAGCTTTCT up 3 0


Secondary structure

ACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTAGTAATTACACATCATACTATACAATGTGCTAGCTTTCTTTGCTTGACTACAAGCCG
-CCTTTTTCTCTCTGGCAAAT 	1
--CTTTTTCTCTCTGGCAAAT 	1
---------------------TGAGGTAGTAGGTTGTATAGT 	185
---------------------TGAGGTAGTAGGTTGTATAGTAG 	1
---------------------TGAGGTAGTAGGTTGTATA 	2
---------------------TGAGGTAGTAGGTTGTATAGTA 	235
---------------------TGAGGTAGTAGGTTGTATAG 	18
----------------------GAGGTAGTAGGTTGTATAGT 	2
-----------------------------------------------------------CTATACAATGTGCTAGCTTTCT 	3
-----------------------------------------------------------CTATACAATGTGCTAGCTTTC 	1

Overlaps with: MNEST036151 MNEST036317 MNEST036318 MNEST037110 MNEST037189 MNEST037479
Overlaps with miRBase pre-miRNAs: dsi-let-7 dse-let-7 der-let-7 dya-let-7 dme-let-7
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
7 Drosophila melanogaster GSM360262-14327 TGAGGTAGTAGGTTGTATAGTA CTATACAATGTGCTAGCTTTCT up 3 0


Secondary structure

ACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTAGTAATTACACATCATACTATACAATGTGCTAGCTTTCTTTGCTTGACTACAAGCCG
---------------------TGAGGTAGTAGGTTGTATAGT 	4155
---------------------TGAGGTAGTAGGTTGTATA 	15
---------------------TGAGGTAGTAGGTTGTATAGTA 	6460
---------------------TGAGGTAGTAGGTTGTATAG 	494
----------------------GAGGTAGTAGGTTGTATAGT 	1
----------------------GAGGTAGTAGGTTGTATAGTA 	12
----------------------GAGGTAGTAGGTTGTATAG 	4
-----------------------AGGTAGTAGGTTGTATAGTA 	3
------------------------GGTAGTAGGTTGTATAGTA 	5
-----------------------------------------------------------CTATACAATGTGCTAGCTTTCT 	163
-----------------------------------------------------------CTATACAATGTGCTAGCTTTC 	13
-----------------------------------------------------------CTATACAATGTGCTAGCTTT 	3
------------------------------------------------------------TATACAATGTGCTAGCTTTCT 	3

Overlaps with: MNEST036151 MNEST036317 MNEST036318 MNEST037110 MNEST037189 MNEST037479
Overlaps with miRBase pre-miRNAs: dsi-let-7 dse-let-7 der-let-7 dya-let-7 dme-let-7
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
8 Drosophila melanogaster GSM385822-16273 TGAGGTAGTAGGTTGTATAGT TATACAATGTGCTAGCTTTCT up 3 0


Secondary structure

ACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTAGTAATTACACATCATACTATACAATGTGCTAGCTTTCTTTGCTTGACTACAAGCCG
---------------------TGAGGTAGTAGGTTGTATAGT 	122
---------------------TGAGGTAGTAGGTTGTATA 	1
---------------------TGAGGTAGTAGGTTGTATAGTA 	24
---------------------TGAGGTAGTAGGTTGTATAG 	23
---------------------TGAGGTAGTAGGTTGTATAGTAGT 	1
------------------------GGTAGTAGGTTGTATAGTA 	1
-----------------------------------------------------------CTATACAATGTGCTAGCTTTCT 	1

Overlaps with: MNEST036151 MNEST036317 MNEST036318 MNEST037110 MNEST037189 MNEST037479
Overlaps with miRBase pre-miRNAs: dsi-let-7 dse-let-7 der-let-7 dya-let-7 dme-let-7
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
9 Drosophila melanogaster GSM360256-14324 TGAGGTAGTAGGTTGTATAGT TATACAATGTGCTAGCTTTCT up 3 0


Secondary structure

ACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTAGTAATTACACATCATACTATACAATGTGCTAGCTTTCTTTGCTTGACTACAAGCCG
---------------------TGAGGTAGTAGGTTGTATAGT 	40
---------------------TGAGGTAGTAGGTTGTATA 	2
---------------------TGAGGTAGTAGGTTGTATAGTA 	13
---------------------TGAGGTAGTAGGTTGTATAG 	20

Overlaps with: MNEST036151 MNEST036317 MNEST036318 MNEST037110 MNEST037189 MNEST037479
Overlaps with miRBase pre-miRNAs: dsi-let-7 dse-let-7 der-let-7 dya-let-7 dme-let-7
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
10 Drosophila melanogaster GSM466494_r2d2_heterozygotes_untreated TGAGGTAGTAGGTTGTATAGT TATACAATGTGCTAGCTTTCT up 3 0


Secondary structure

ACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTAGTAATTACACATCATACTATACAATGTGCTAGCTTTCTTTGCTTGACTACAAGCCG
---------------------TGAGGTAGTAGGTTGTATAGT 	18837
---------------------TGAGGTAGTAGGTTGTATAGTA 	4755
---------------------TGAGGTAGTAGGTTGTATAG 	358
-----------------------------------------------------------CTATACAATGTGCTAGCTTTC 	42
-----------------------------------------------------------CTATACAATGTGCTAGCTTTCT 	316
-----------------------------------------------------------CTATACAATGTGCTAGCTTT 	6
------------------------------------------------------------TATACAATGTGCTAGCTTTCT 	3
------------------------------------------------------------TATACAATGTGCTAGCTTTC 	1
-------------------------------------------------------------ATACAATGTGCTAGCTTTCT 	1

Overlaps with: MNEST036151 MNEST036317 MNEST036318 MNEST037110 MNEST037189 MNEST037479
Overlaps with miRBase pre-miRNAs: dsi-let-7 dse-let-7 der-let-7 dya-let-7 dme-let-7
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
11 Drosophila melanogaster GSM466496_r2d2_homozygotes_untreated TGAGGTAGTAGGTTGTATAGT TATACAATGTGCTAGCTTTCT up 3 0


Secondary structure

ACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTAGTAATTACACATCATACTATACAATGTGCTAGCTTTCTTTGCTTGACTACAAGCCG
--CTTTTTCTCTCTGGCAAAT 	1
---------------------TGAGGTAGTAGGTTGTATAGT 	25432
---------------------TGAGGTAGTAGGTTGTATAGTAG 	13
---------------------TGAGGTAGTAGGTTGTATAGTA 	6154
---------------------TGAGGTAGTAGGTTGTATAG 	14387
-----------------------------------------------------------CTATACAATGTGCTAGCTTTC 	24
-----------------------------------------------------------CTATACAATGTGCTAGCTTTCT 	204
------------------------------------------------------------TATACAATGTGCTAGCTTTCT 	1
--------------------------------------------------------------TACAATGTGCTAGCTTTCT 	1

Overlaps with: MNEST036151 MNEST036317 MNEST036318 MNEST037110 MNEST037189 MNEST037479
Overlaps with miRBase pre-miRNAs: dsi-let-7 dse-let-7 der-let-7 dya-let-7 dme-let-7
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
12 Drosophila melanogaster GSM371638-15389 TGAGGTAGTAGGTTGTATAGT TATACAATGTGCTAGCTTTCT up 3 0


Secondary structure

ACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTAGTAATTACACATCATACTATACAATGTGCTAGCTTTCTTTGCTTGACTACAAGCCG
---------------------TGAGGTAGTAGGTTGTATAGT 	11
---------------------TGAGGTAGTAGGTTGTATA 	1
---------------------TGAGGTAGTAGGTTGTATAGTA 	3

Overlaps with: MNEST036151 MNEST036317 MNEST036318 MNEST037110 MNEST037189 MNEST037479
Overlaps with miRBase pre-miRNAs: dsi-let-7 dse-let-7 der-let-7 dya-let-7 dme-let-7
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
13 Drosophila melanogaster GSM286605-9793 TGAGGTAGTAGGTTGTATAGT TATACAATGTGCTAGCTTTCT up 3 0


Secondary structure

ACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTAGTAATTACACATCATACTATACAATGTGCTAGCTTTCTTTGCTTGACTACAAGCCG
---------------------TGAGGTAGTAGGTTGTATAGT 	556
---------------------TGAGGTAGTAGGTTGTATAGTAG 	1
---------------------TGAGGTAGTAGGTTGTATA 	16
---------------------TGAGGTAGTAGGTTGTATAGTA 	217
---------------------TGAGGTAGTAGGTTGTATAG 	156
-----------------------------------------------------------CTATACAATGTGCTAGCTTTCT 	2

Overlaps with: MNEST036151 MNEST036317 MNEST036318 MNEST037110 MNEST037189 MNEST037479
Overlaps with miRBase pre-miRNAs: dsi-let-7 dse-let-7 der-let-7 dya-let-7 dme-let-7
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
14 Drosophila melanogaster GSM343833-15151 TGAGGTAGTAGGTTGTATAGT TATACAATGTGCTAGCTTTCT up 3 0


Secondary structure

ACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTAGTAATTACACATCATACTATACAATGTGCTAGCTTTCTTTGCTTGACTACAAGCCG
---------------------TGAGGTAGTAGGTTGTATAGT 	17
---------------------TGAGGTAGTAGGTTGTATAGTA 	8
---------------------TGAGGTAGTAGGTTGTATAG 	2
-----------------------------------------------------------CTATACAATGTGCTAGCTTTCT 	1

Overlaps with: MNEST036151 MNEST036317 MNEST036318 MNEST037110 MNEST037189 MNEST037479
Overlaps with miRBase pre-miRNAs: dsi-let-7 dse-let-7 der-let-7 dya-let-7 dme-let-7
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
15 Drosophila melanogaster GSM343832-15149 TGAGGTAGTAGGTTGTATAGT TATACAATGTGCTAGCTTTCT up 3 0


Secondary structure

ACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTAGTAATTACACATCATACTATACAATGTGCTAGCTTTCTTTGCTTGACTACAAGCCG
---------------------TGAGGTAGTAGGTTGTATAGT 	39
---------------------TGAGGTAGTAGGTTGTATA 	2
---------------------TGAGGTAGTAGGTTGTATAGTA 	13
---------------------TGAGGTAGTAGGTTGTATAG 	6
-----------------------------------------------------------CTATACAATGTGCTAGCTTTC 	1

Overlaps with: MNEST036151 MNEST036317 MNEST036318 MNEST037110 MNEST037189 MNEST037479
Overlaps with miRBase pre-miRNAs: dsi-let-7 dse-let-7 der-let-7 dya-let-7 dme-let-7
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
16 Drosophila melanogaster GSM399100-5263 TGAGGTAGTAGGTTGTATAGT TATACAATGTGCTAGCTTTCT up 3 0


Secondary structure

ACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTAGTAATTACACATCATACTATACAATGTGCTAGCTTTCTTTGCTTGACTACAAGCCG
---------------------TGAGGTAGTAGGTTGTATAGT 	288
---------------------TGAGGTAGTAGGTTGTATAGTAG 	1
---------------------TGAGGTAGTAGGTTGTATA 	5
---------------------TGAGGTAGTAGGTTGTATAGTA 	70
---------------------TGAGGTAGTAGGTTGTATAG 	38
-----------------------------------------------------------CTATACAATGTGCTAGCTTTCT 	7

Overlaps with: MNEST036151 MNEST036317 MNEST036318 MNEST037110 MNEST037189 MNEST037479
Overlaps with miRBase pre-miRNAs: dsi-let-7 dse-let-7 der-let-7 dya-let-7 dme-let-7
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
17 Drosophila melanogaster GSM360260-14326 TGAGGTAGTAGGTTGTATAGTA CTATACAATGTGCTAGCTTTCT up 3 0


Secondary structure

ACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTAGTAATTACACATCATACTATACAATGTGCTAGCTTTCTTTGCTTGACTACAAGCCG
--CTTTTTCTCTCTGGCAAAT 	2
---------------------TGAGGTAGTAGGTTGTATAGT 	5234
---------------------TGAGGTAGTAGGTTGTATAGTAG 	1
---------------------TGAGGTAGTAGGTTGTATA 	20
---------------------TGAGGTAGTAGGTTGTATAGTA 	5736
---------------------TGAGGTAGTAGGTTGTATAG 	568
----------------------GAGGTAGTAGGTTGTATAGT 	7
----------------------GAGGTAGTAGGTTGTATAGTA 	9
----------------------GAGGTAGTAGGTTGTATAG 	1
------------------------GGTAGTAGGTTGTATAGTA 	5
-------------------------------------------------------CATACTATACAATGTGCTAGC 	3
-----------------------------------------------------------CTATACAATGTGCTAGCTTTCTT 	2
-----------------------------------------------------------CTATACAATGTGCTAGCTTTCT 	212
-----------------------------------------------------------CTATACAATGTGCTAGCTTTC 	24
--------------------------------------------------------------TACAATGTGCTAGCTTTCT 	2

Overlaps with: MNEST036151 MNEST036317 MNEST036318 MNEST037110 MNEST037189 MNEST037479
Overlaps with miRBase pre-miRNAs: dsi-let-7 dse-let-7 der-let-7 dya-let-7 dme-let-7
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
18 Drosophila melanogaster GSM322543-14323 TGAGGTAGTAGGTTGTATAGT TATACAATGTGCTAGCTTTCT up 3 0


Secondary structure

ACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTAGTAATTACACATCATACTATACAATGTGCTAGCTTTCTTTGCTTGACTACAAGCCG
--CTTTTTCTCTCTGGCAAAT 	1
--------------------TTGAGGTAGTAGGTTGTATAG 	2
---------------------TGAGGTAGTAGGTTGTATAGT 	35329
---------------------TGAGGTAGTAGGTTGTATAGTAG 	7
---------------------TGAGGTAGTAGGTTGTATA 	1165
---------------------TGAGGTAGTAGGTTGTATAGTA 	10278
---------------------TGAGGTAGTAGGTTGTATAG 	14700
----------------------GAGGTAGTAGGTTGTATAGTA 	4
----------------------GAGGTAGTAGGTTGTATAG 	3
----------------------GAGGTAGTAGGTTGTATAGT 	77
-----------------------AGGTAGTAGGTTGTATAGT 	1
------------------------GGTAGTAGGTTGTATAGTA 	60
-----------------------------------------------------------CTATACAATGTGCTAGCTTTCT 	399
-----------------------------------------------------------CTATACAATGTGCTAGCTTTC 	65
-----------------------------------------------------------CTATACAATGTGCTAGCTTT 	1
------------------------------------------------------------TATACAATGTGCTAGCTTTCT 	3

Overlaps with: MNEST036151 MNEST036317 MNEST036318 MNEST037110 MNEST037189 MNEST037479
Overlaps with miRBase pre-miRNAs: dsi-let-7 dse-let-7 der-let-7 dya-let-7 dme-let-7
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
19 Drosophila melanogaster GSM286607-9796 TGAGGTAGTAGGTTGTATAGT TATACAATGTGCTAGCTTTCT up 3 0


Secondary structure

ACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTAGTAATTACACATCATACTATACAATGTGCTAGCTTTCTTTGCTTGACTACAAGCCG
---------------------TGAGGTAGTAGGTTGTATAGT 	21
---------------------TGAGGTAGTAGGTTGTATAGTA 	20
---------------------TGAGGTAGTAGGTTGTATAG 	1

Overlaps with: MNEST036151 MNEST036317 MNEST036318 MNEST037110 MNEST037189 MNEST037479
Overlaps with miRBase pre-miRNAs: dsi-let-7 dse-let-7 der-let-7 dya-let-7 dme-let-7
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
20 Drosophila melanogaster GSM399101-5265 TGAGGTAGTAGGTTGTATAGT TATACAATGTGCTAGCTTTCT up 3 0


Secondary structure

ACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTAGTAATTACACATCATACTATACAATGTGCTAGCTTTCTTTGCTTGACTACAAGCCG
---------------------TGAGGTAGTAGGTTGTATAGT 	242
---------------------TGAGGTAGTAGGTTGTATA 	2
---------------------TGAGGTAGTAGGTTGTATAGTA 	70
---------------------TGAGGTAGTAGGTTGTATAG 	40
-----------------------------------------------------------CTATACAATGTGCTAGCTTTCT 	4
-----------------------------------------------------------CTATACAATGTGCTAGCTTTC 	2
-----------------------------------------------------------CTATACAATGTGCTAGCTTT 	1

Overlaps with: MNEST036151 MNEST036317 MNEST036318 MNEST037110 MNEST037189 MNEST037479
Overlaps with miRBase pre-miRNAs: dsi-let-7 dse-let-7 der-let-7 dya-let-7 dme-let-7
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
21 Drosophila melanogaster GSM286604-9792 TGAGGTAGTAGGTTGTATAGT TATACAATGTGCTAGCTTTCT up 3 0


Secondary structure

ACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTAGTAATTACACATCATACTATACAATGTGCTAGCTTTCTTTGCTTGACTACAAGCCG
---------------------TGAGGTAGTAGGTTGTATAGT 	5846
---------------------TGAGGTAGTAGGTTGTATAGTAG 	4
---------------------TGAGGTAGTAGGTTGTATA 	178
---------------------TGAGGTAGTAGGTTGTATAGTA 	1965
---------------------TGAGGTAGTAGGTTGTATAG 	2153
----------------------GAGGTAGTAGGTTGTATAGT 	9
----------------------GAGGTAGTAGGTTGTATAG 	4
-----------------------------------------------------------CTATACAATGTGCTAGCTTTCT 	83
-----------------------------------------------------------CTATACAATGTGCTAGCTTTC 	2

Overlaps with: MNEST036151 MNEST036317 MNEST036318 MNEST037110 MNEST037189 MNEST037479
Overlaps with miRBase pre-miRNAs: dsi-let-7 dse-let-7 der-let-7 dya-let-7 dme-let-7
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
22 Drosophila melanogaster GSM385744-16261 TGAGGTAGTAGGTTGTATAGT TATACAATGTGCTAGCTTTCT up 3 0


Secondary structure

ACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTAGTAATTACACATCATACTATACAATGTGCTAGCTTTCTTTGCTTGACTACAAGCCG
---------------------TGAGGTAGTAGGTTGTATAGT 	192
---------------------TGAGGTAGTAGGTTGTATA 	1
---------------------TGAGGTAGTAGGTTGTATAGTA 	32
---------------------TGAGGTAGTAGGTTGTATAG 	34
-----------------------------------------------------------CTATACAATGTGCTAGCTTTCT 	4

Overlaps with: MNEST036151 MNEST036317 MNEST036318 MNEST037110 MNEST037189 MNEST037479
Overlaps with miRBase pre-miRNAs: dsi-let-7 dse-let-7 der-let-7 dya-let-7 dme-let-7
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
23 Drosophila melanogaster GSM322208-14317 TGAGGTAGTAGGTTGTATAGTA CTATACAATGTGCTAGCTTTCT up 3 0


Secondary structure

ACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTAGTAATTACACATCATACTATACAATGTGCTAGCTTTCTTTGCTTGACTACAAGCCG
---------------------TGAGGTAGTAGGTTGTATAGT 	122
---------------------TGAGGTAGTAGGTTGTATAGTAG 	1
---------------------TGAGGTAGTAGGTTGTATA 	7
---------------------TGAGGTAGTAGGTTGTATAGTA 	263
---------------------TGAGGTAGTAGGTTGTATAG 	17
-----------------------AGGTAGTAGGTTGTATAGTA 	1
-----------------------------------------------------------CTATACAATGTGCTAGCTTTCT 	5
-----------------------------------------------------------CTATACAATGTGCTAGCTTT 	1

Overlaps with: MNEST036151 MNEST036317 MNEST036318 MNEST037110 MNEST037189 MNEST037479
Overlaps with miRBase pre-miRNAs: dsi-let-7 dse-let-7 der-let-7 dya-let-7 dme-let-7
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
24 Drosophila melanogaster GSM385748-16264 TGAGGTAGTAGGTTGTATAGT TATACAATGTGCTAGCTTTCT up 3 0


Secondary structure

ACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTAGTAATTACACATCATACTATACAATGTGCTAGCTTTCTTTGCTTGACTACAAGCCG
---------------------TGAGGTAGTAGGTTGTATAGTA 	59
---------------------TGAGGTAGTAGGTTGTATAG 	72
---------------------TGAGGTAGTAGGTTGTATAGT 	394
---------------------TGAGGTAGTAGGTTGTATA 	2
-----------------------------------------------------------CTATACAATGTGCTAGCTTTCT 	5
-----------------------------------------------------------CTATACAATGTGCTAGCTTT 	1

Overlaps with: MNEST036151 MNEST036317 MNEST036318 MNEST037110 MNEST037189 MNEST037479
Overlaps with miRBase pre-miRNAs: dsi-let-7 dse-let-7 der-let-7 dya-let-7 dme-let-7
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
25 Drosophila melanogaster GSM399110-16285 TGAGGTAGTAGGTTGTATAGT TATACAATGTGCTAGCTTTCT up 3 0


Secondary structure

ACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTAGTAATTACACATCATACTATACAATGTGCTAGCTTTCTTTGCTTGACTACAAGCCG
---------------------TGAGGTAGTAGGTTGTATAGT 	89
---------------------TGAGGTAGTAGGTTGTATAGTA 	9
---------------------TGAGGTAGTAGGTTGTATAG 	35

Overlaps with: MNEST036151 MNEST036317 MNEST036318 MNEST037110 MNEST037189 MNEST037479
Overlaps with miRBase pre-miRNAs: dsi-let-7 dse-let-7 der-let-7 dya-let-7 dme-let-7
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
26 Drosophila melanogaster GSM466492_dcr-2_homozygotes_untreated TGAGGTAGTAGGTTGTATAGT TATACAATGTGCTAGCTTTCT up 3 0


Secondary structure

ACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTAGTAATTACACATCATACTATACAATGTGCTAGCTTTCTTTGCTTGACTACAAGCCG
---------------------TGAGGTAGTAGGTTGTATAGTAG 	9
---------------------TGAGGTAGTAGGTTGTATAGT 	9726
---------------------TGAGGTAGTAGGTTGTATAGTA 	2984
---------------------TGAGGTAGTAGGTTGTATAG 	3480
---------------------TGAGGTAGTAGGTTGTATAGTAGT 	2
----------------------------------------------------------ACTATACAATGTGCTAGCTTTCT 	1
-----------------------------------------------------------CTATACAATGTGCTAGCTTTCT 	92
-----------------------------------------------------------CTATACAATGTGCTAGCTTTC 	5
-----------------------------------------------------------CTATACAATGTGCTAGCTTT 	1
------------------------------------------------------------TATACAATGTGCTAGCTTTCT 	3
-------------------------------------------------------------ATACAATGTGCTAGCTTTC 	1
--------------------------------------------------------------TACAATGTGCTAGCTTTCT 	1

Overlaps with: MNEST036151 MNEST036317 MNEST036318 MNEST037110 MNEST037189 MNEST037479
Overlaps with miRBase pre-miRNAs: dsi-let-7 dse-let-7 der-let-7 dya-let-7 dme-let-7
HuntMi prediction: true miRNA