miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: deep sequencing predictions



Please select library, species and/or miRNA sequence.


selected mature miRNA sequence: TGAGTATTACATGGCCAATCTC

selected species: Homo sapiens



2 records found  

#specieslibrarymiRNAmiRNA*armmismatchesbulges
1 Homo sapiens GSM494810_Normal_2 TGAGTATTACATGGCCAATCTC GGTTGTCCATGGTGTGTTCATT down 3 0


Secondary structure

CCAAGTCAGGTACTCGAATGGAGGTTGTCCATGGTGTGTTCATTTTATTTATGATGAGTATTACATGGCCAATCTCCTTTCGGTACTCAATTCTT
----------------------GGTTGTCCATGGTGTGTTCATT 	1
------------------------------------------------------TGAGTATTACATGGCCAATCTC 	7
------------------------------------------------------TGAGTATTACATGGCCAATCT 	6
--------------------------------------------------------AGTATTACATGGCCAATCTCC 	2

Overlaps with: MNEST028687
Overlaps with miRBase pre-miRNAs: ptr-mir-496 hsa-mir-496
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
2 Homo sapiens GSM531978 TGAGTATTACATGGCCAATCTC GGTTGTCCATGGTGTGTTCATT down 3 0


Secondary structure

CCAAGTCAGGTACTCGAATGGAGGTTGTCCATGGTGTGTTCATTTTATTTATGATGAGTATTACATGGCCAATCTCCTTTCGGTACTCAATTCTT
------------------------------------------------------TGAGTATTACATGGCCAATCTC 	6
------------------------------------------------------TGAGTATTACATGGCCAATCT 	3
------------------------------------------------------TGAGTATTACATGGCCAATC 	1
-------------------------------------------------------GAGTATTACATGGCCAATCTC 	1

Overlaps with: MNEST028687
Overlaps with miRBase pre-miRNAs: ptr-mir-496 hsa-mir-496
HuntMi prediction: true miRNA