miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: deep sequencing predictions



Please select library, species and/or miRNA sequence.


selected mature miRNA sequence: TGATGATACAGGTGGAGGTAG

selected species: Homo sapiens



2 records found  

#specieslibrarymiRNAmiRNA*armmismatchesbulges
1 Homo sapiens GSM494809_Normal_1 TGATGATACAGGTGGAGGTAG ACTTCTACCTGTGTTATCATA down 0 0


Secondary structure

TCTTCGTAAGTTATATATGTCTACTTCTACCTGTGTTATCATAATAAAGGTGTCATGATGATACAGGTGGAGGTAGAAATATATAACTTATCTCT
-------------------------------------------------------TGATGATACAGGTGGAGGTAG 	8
-------------------------------------------------------TGATGATACAGGTGGAGGTAGA 	1
--------------------------------------------------------GATGATACAGGTGGAGGTAGAA 	1
--------------------------------------------------------GATGATACAGGTGGAGGTAG 	1
---------------------------------------------------------ATGATACAGGTGGAGGTAGAAA 	1

Overlaps with: MNEST029451 MNEST029452
Overlaps with miRBase pre-miRNAs: hsa-mir-3682
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
2 Homo sapiens GSM569187 TGATGATACAGGTGGAGGTAG ACTTCTACCTGTGTTATCATA down 0 0


Secondary structure

TCTTCGTAAGTTATATATGTCTACTTCTACCTGTGTTATCATAATAAAGGTGTCATGATGATACAGGTGGAGGTAGAAATATATAACTTATCTCT
-------------------------------------------------------TGATGATACAGGTGGAGGTAG 	5
--------------------------------------------------------GATGATACAGGTGGAGGTAGA 	2
--------------------------------------------------------GATGATACAGGTGGAGGTAGAA 	2

Overlaps with: MNEST029451 MNEST029452
Overlaps with miRBase pre-miRNAs: hsa-mir-3682
HuntMi prediction: true miRNA