miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: deep sequencing predictions



Please select library, species and/or miRNA sequence.


selected mature miRNA sequence: TGCCAAAGGAGATTTGCCCCG

selected species: Arabidopsis thaliana



1 records found  

#specieslibrarymiRNAmiRNA*armmismatchesbulges
1 Arabidopsis thaliana GSM424847-4989 TGCCAAAGGAGATTTGCCCCG GGGCGAATACTCCTATGGCAGA down 3 1


Secondary structure

AGTGAAGATGCATGTTTATGAAGACAGAGAGATAATGTATGGTTGGATTACTGGGCGAATACTCCTATGGCAGATCGCATTGGCTAGATATGCAAGTAAAATGCTTCTCTGCCAAAGGAGATTTGCCCCGCAATTCATCCCATGCAAAACAATATATCTTTCTTTATAGTCTCTAGGCA
----------------------------------------------------GGGCGAATACTCCTATGGCAGA 	2
-------------------------------------------------------------------------------------------------------------TGCCAAAGGAGATTTGCCCCG 	5

Overlaps with: MNEST040095 MNEST047018
Overlaps with miRBase pre-miRNAs: ath-MIR399d
HuntMi prediction: true miRNA