miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: deep sequencing predictions



Please select library, species and/or miRNA sequence.


selected mature miRNA sequence: TGCCCACCAGGGTTCGATCCA

selected species: Brachypodium distachyon



1 records found  

#specieslibrarymiRNAmiRNA*armmismatchesbulges
1 Brachypodium distachyon GSM506620-12051 TGCCCACCAGGGTTCGATCCA GATCGGACCCTGGTGTGCAGC up 2 0


Secondary structure

CGAGCTTAGCTTGGGTGGTTAGCCCAGCGAGGTATGTTGGCTGCCCACCAGGGTTCGATCCAACAAGGTCGCATTCTATATAAATAATTTTCGTAAGGTGAGGCACCAAAATGCAATCCAATCACGCCTCTCCTACAAATATATATCTATAATTTTGTAAGGTGAGGCACCAGAATGCGACCCAATCACGCCTCTACTACAATATGTATATAATTTTCGTAAGGTGAGGCGCCAGAATGTGACCTTGTGGGATCGGACCCTGGTGTGCAGCCAGCATACCTCGCTGGGCTAACCTAACACCCAAGCTGA
---------------TGGTTAGCCCAGCGAGGTATGTTGGC 	1
-----------------------------------------TGCCCACCAGGGTTCGATCCA 	14
------------------------------------------GCCCACCAGGGTTCGATCCAA 	1
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATCGGACCCTGGTGTGCAGC 	2
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGCATACCTCGCTGGGCTAACCT 	1

Overlaps with: MNEST041835
Overlaps with miRBase pre-miRNAs: bdi-MIR5166
HuntMi prediction: true miRNA