miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: deep sequencing predictions




selected mature miRNA sequence: TGCCTGGAACATAGTAGGGACT

selected species: Homo sapiens



2 records found  

#specieslibrarymiRNAmiRNA*armmismatchesbulges
1 Homo sapiens GSM565979-9647 TGCCTGGAACATAGTAGGGACT TCCCTACTATGTTCCAGGCACC down 0 0


Secondary structure

TCCTTTATTGAGTCCCTACTATGTTCCAGGCACCTACGATACCCAGTGCCTGGAACATAGTAGGGACTCAATAAAGT
----------------------------------------------TGCCTGGAACATAGTAGGGACT 	5
----------------------------------------------TGCCTGGAACATAGTAGGGA 	1

Overlaps with: MNEST029234 MNEST029233
Overlaps with miRBase pre-miRNAs: hsa-mir-3116-1 hsa-mir-3116-2
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
2 Homo sapiens GSM565978-9532 TGCCTGGAACATAGTAGGGACT TCCCTACTATGTTCCAGGCACC down 0 0


Secondary structure

TCCTTTATTGAGTCCCTACTATGTTCCAGGCACCTACGATACCCAGTGCCTGGAACATAGTAGGGACTCAATAAAGT
----------------------------------------------TGCCTGGAACATAGTAGGGACT 	6
----------------------------------------------TGCCTGGAACATAGTAGGGAC 	2

Overlaps with: MNEST029234 MNEST029233
Overlaps with miRBase pre-miRNAs: hsa-mir-3116-1 hsa-mir-3116-2
HuntMi prediction: true miRNA