miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: deep sequencing predictions



Please select library, species and/or miRNA sequence.


selected mature miRNA sequence: TGGACGGAGAACTGATAAAGGA

selected species: Acyrthosiphon pisum



1 records found  

#specieslibrarymiRNAmiRNA*armmismatchesbulges
1 Acyrthosiphon pisum GSM502519_unique_quant TGGACGGAGAACTGATAAAGGA CTTTATCATTCTCTGGTCTTGT down 1 2


Secondary structure

TTCAGATTTTCCAATTACACTCCTTTATCATTCTCTGGTCTTGTGTGAATTTTATACTACTGGACGGAGAACTGATAAAGGAAAGTGATGTGGAACAAATG
----------------------CTTTATCATTCTCTGGTCTTGT 	5
----------------------CTTTATCATTCTCTGGTCTTG 	3
-----------------------------------------------------------CTGGACGGAGAACTGATAAAGGA 	1
-----------------------------------------------------------CTGGACGGAGAACTGATAAAGG 	1
------------------------------------------------------------TGGACGGAGAACTGATAAAGGA 	469
------------------------------------------------------------TGGACGGAGAACTGATAAAGG 	58
------------------------------------------------------------TGGACGGAGAACTGATAAAG 	142
------------------------------------------------------------TGGACGGAGAACTGATAAAGGAAA 	15
------------------------------------------------------------TGGACGGAGAACTGATAAAGGAA 	31
------------------------------------------------------------TGGACGGAGAACTGATAAA 	24

Overlaps with: MNEST035066
Overlaps with miRBase pre-miRNAs: api-mir-184b
HuntMi prediction: true miRNA