miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: deep sequencing predictions



Please select library, species and/or miRNA sequence.


selected mature miRNA sequence: TGGACGGAGAACTGATAAGGGC

selected species: Drosophila melanogaster



21 records found  

#specieslibrarymiRNAmiRNA*armmismatchesbulges
1 Drosophila melanogaster GSM360257-14325 TGGACGGAGAACTGATAAGGGC CCTTATCATTCTCTCGCCCCG down 4 1


Secondary structure

GGGTTGGCCGGTGCATTCGTACCCTTATCATTCTCTCGCCCCGTGTGCACTTAAAGACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAATTCATCA
----------------------CCTTATCATTCTCTCGCCCCGT 	1
----------------------CCTTATCATTCTCTCGCCCCG 	1
-------------------------------------------------------------TGGACGGAGAACTGATAAGGG 	41
-------------------------------------------------------------TGGACGGAGAACTGATAAG 	8
-------------------------------------------------------------TGGACGGAGAACTGATAAGGGC 	260
-------------------------------------------------------------TGGACGGAGAACTGATAAGG 	13
--------------------------------------------------------------GGACGGAGAACTGATAAGGGC 	1
---------------------------------------------------------------GACGGAGAACTGATAAGGGC 	1
----------------------------------------------------------------ACGGAGAACTGATAAGGGC 	1

Overlaps with: MNEST036393 MNEST036394
Overlaps with miRBase pre-miRNAs: dme-mir-184
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
2 Drosophila melanogaster GSM399107-16288 TGGACGGAGAACTGATAAGGGC CCTTATCATTCTCTCGCCCCG down 4 1


Secondary structure

GGGTTGGCCGGTGCATTCGTACCCTTATCATTCTCTCGCCCCGTGTGCACTTAAAGACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAATTCATCA
----------------------CCTTATCATTCTCTCGCCCCGT 	44
----------------------CCTTATCATTCTCTCGCCCCG 	16
----------------------CCTTATCATTCTCTCGCCCC 	6
------------------------------------------------------------CTGGACGGAGAACTGATAAGGG 	2
------------------------------------------------------------CTGGACGGAGAACTGATAAGG 	1
-------------------------------------------------------------TGGACGGAGAACTGATAAGGG 	2951
-------------------------------------------------------------TGGACGGAGAACTGATAAG 	551
-------------------------------------------------------------TGGACGGAGAACTGATAAGGGCT 	74
-------------------------------------------------------------TGGACGGAGAACTGATAAGGGC 	5691
-------------------------------------------------------------TGGACGGAGAACTGATAAGG 	1840
--------------------------------------------------------------GGACGGAGAACTGATAAGGGC 	7
--------------------------------------------------------------GGACGGAGAACTGATAAGGG 	4
--------------------------------------------------------------GGACGGAGAACTGATAAGG 	3

Overlaps with: MNEST036393 MNEST036394
Overlaps with miRBase pre-miRNAs: dme-mir-184
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
3 Drosophila melanogaster GSM399106-16287 TGGACGGAGAACTGATAAGGGC CCTTATCATTCTCTCGCCCCG down 4 1


Secondary structure

GGGTTGGCCGGTGCATTCGTACCCTTATCATTCTCTCGCCCCGTGTGCACTTAAAGACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAATTCATCA
----------------------CCTTATCATTCTCTCGCCCCG 	18
----------------------CCTTATCATTCTCTCGCCCCGT 	78
----------------------CCTTATCATTCTCTCGCCCC 	1
--------------------------------------------GTGCACTTAAAGACAACTG 	1
------------------------------------------------------------CTGGACGGAGAACTGATAAGGG 	2
-------------------------------------------------------------TGGACGGAGAACTGATAAGGGC 	5176
-------------------------------------------------------------TGGACGGAGAACTGATAAGGG 	2103
-------------------------------------------------------------TGGACGGAGAACTGATAAG 	333
-------------------------------------------------------------TGGACGGAGAACTGATAAGGGCT 	68
-------------------------------------------------------------TGGACGGAGAACTGATAAGG 	1660
--------------------------------------------------------------GGACGGAGAACTGATAAGGGC 	11
--------------------------------------------------------------GGACGGAGAACTGATAAGGG 	5
---------------------------------------------------------------GACGGAGAACTGATAAGGGC 	6
---------------------------------------------------------------GACGGAGAACTGATAAGGG 	2

Overlaps with: MNEST036393 MNEST036394
Overlaps with miRBase pre-miRNAs: dme-mir-184
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
4 Drosophila melanogaster GSM466487_wt_total TGGACGGAGAACTGATAAGGGC CCTTATCATTCTCTCGCCCCG down 4 1


Secondary structure

GGGTTGGCCGGTGCATTCGTACCCTTATCATTCTCTCGCCCCGTGTGCACTTAAAGACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAATTCATCA
----------------------CCTTATCATTCTCTCGCCCCG 	20
----------------------CCTTATCATTCTCTCGCCCCGT 	38
------------------------TTATCATTCTCTCGCCCCGTGTG 	1
--------------------------------------------------------ACAACTGGACGGAGAACTGAT 	1
----------------------------------------------------------AACTGGACGGAGAACTGATAAGG 	1
------------------------------------------------------------CTGGACGGAGAACTGATAAGG 	4
------------------------------------------------------------CTGGACGGAGAACTGATAAGGG 	6
-------------------------------------------------------------TGGACGGAGAACTGATAAGGG 	12675
-------------------------------------------------------------TGGACGGAGAACTGATAAGGGCTC 	1
-------------------------------------------------------------TGGACGGAGAACTGATAAGG 	5032
-------------------------------------------------------------TGGACGGAGAACTGATAAGGGC 	20022
-------------------------------------------------------------TGGACGGAGAACTGATAAG 	1831
-------------------------------------------------------------TGGACGGAGAACTGATAAGGGCT 	574
--------------------------------------------------------------GGACGGAGAACTGATAAGGGC 	289
--------------------------------------------------------------GGACGGAGAACTGATAAGGG 	171
--------------------------------------------------------------GGACGGAGAACTGATAAGGGCT 	7
--------------------------------------------------------------GGACGGAGAACTGATAAGG 	69
---------------------------------------------------------------GACGGAGAACTGATAAGGG 	16
---------------------------------------------------------------GACGGAGAACTGATAAGGGCT 	1
---------------------------------------------------------------GACGGAGAACTGATAAGGGC 	27
----------------------------------------------------------------ACGGAGAACTGATAAGGGC 	6

Overlaps with: MNEST036393 MNEST036394
Overlaps with miRBase pre-miRNAs: dme-mir-184
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
5 Drosophila melanogaster GSM399105-16286 TGGACGGAGAACTGATAAGGGC CCTTATCATTCTCTCGCCCCG down 4 1


Secondary structure

GGGTTGGCCGGTGCATTCGTACCCTTATCATTCTCTCGCCCCGTGTGCACTTAAAGACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAATTCATCA
----------------------CCTTATCATTCTCTCGCCCCGT 	22
----------------------CCTTATCATTCTCTCGCCCCG 	7
----------------------CCTTATCATTCTCTCGCCCC 	2
-------------------------------------------------------------TGGACGGAGAACTGATAAGGG 	684
-------------------------------------------------------------TGGACGGAGAACTGATAAG 	68
-------------------------------------------------------------TGGACGGAGAACTGATAAGGGCT 	18
-------------------------------------------------------------TGGACGGAGAACTGATAAGGGC 	3508
-------------------------------------------------------------TGGACGGAGAACTGATAAGG 	283
--------------------------------------------------------------GGACGGAGAACTGATAAGGGC 	13
--------------------------------------------------------------GGACGGAGAACTGATAAGGG 	1
--------------------------------------------------------------GGACGGAGAACTGATAAGG 	1
---------------------------------------------------------------GACGGAGAACTGATAAGGGC 	1
---------------------------------------------------------------GACGGAGAACTGATAAGGG 	2

Overlaps with: MNEST036393 MNEST036394
Overlaps with miRBase pre-miRNAs: dme-mir-184
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
6 Drosophila melanogaster GSM360262-14327 TGGACGGAGAACTGATAAGGGC CCTTATCATTCTCTCGCCCCG down 4 1


Secondary structure

GGGTTGGCCGGTGCATTCGTACCCTTATCATTCTCTCGCCCCGTGTGCACTTAAAGACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAATTCATCA
----------------------CCTTATCATTCTCTCGCCCCGT 	88
----------------------CCTTATCATTCTCTCGCCCCG 	12
------------------------TTATCATTCTCTCGCCCCG 	2
------------------------------------------------------------CTGGACGGAGAACTGATAAGGGC 	1
-------------------------------------------------------------TGGACGGAGAACTGATAAGGG 	3843
-------------------------------------------------------------TGGACGGAGAACTGATAAG 	353
-------------------------------------------------------------TGGACGGAGAACTGATAAGGGCT 	88
-------------------------------------------------------------TGGACGGAGAACTGATAAGGGC 	14461
-------------------------------------------------------------TGGACGGAGAACTGATAAGG 	1887
--------------------------------------------------------------GGACGGAGAACTGATAAGGGC 	33
--------------------------------------------------------------GGACGGAGAACTGATAAGGG 	13
--------------------------------------------------------------GGACGGAGAACTGATAAGG 	3
---------------------------------------------------------------GACGGAGAACTGATAAGGGC 	6
---------------------------------------------------------------GACGGAGAACTGATAAGGG 	2
----------------------------------------------------------------ACGGAGAACTGATAAGGGC 	2

Overlaps with: MNEST036393 MNEST036394
Overlaps with miRBase pre-miRNAs: dme-mir-184
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
7 Drosophila melanogaster GSM385822-16273 TGGACGGAGAACTGATAAGGGC CCTTATCATTCTCTCGCCCCG down 4 1


Secondary structure

GGGTTGGCCGGTGCATTCGTACCCTTATCATTCTCTCGCCCCGTGTGCACTTAAAGACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAATTCATCA
--------------------ACCCTTATCATTCTCTCGCCCCGT 	1
----------------------CCTTATCATTCTCTCGCCCCG 	14
----------------------CCTTATCATTCTCTCGCCC 	3
----------------------CCTTATCATTCTCTCGCCCC 	7
----------------------CCTTATCATTCTCTCGCCCCGT 	56
--------------------------ATCATTCTCTCGCCCCGTGTGCAC 	1
------------------------------------------------------------CTGGACGGAGAACTGATAAGGGC 	7
------------------------------------------------------------CTGGACGGAGAACTGATAAGGG 	1
-------------------------------------------------------------TGGACGGAGAACTGATAAGGG 	495
-------------------------------------------------------------TGGACGGAGAACTGATAAGG 	305
-------------------------------------------------------------TGGACGGAGAACTGATAAGGGC 	4102
-------------------------------------------------------------TGGACGGAGAACTGATAAG 	58
-------------------------------------------------------------TGGACGGAGAACTGATAAGGGCT 	95
--------------------------------------------------------------GGACGGAGAACTGATAAGGGC 	3
---------------------------------------------------------------GACGGAGAACTGATAAGGGC 	6

Overlaps with: MNEST036393 MNEST036394
Overlaps with miRBase pre-miRNAs: dme-mir-184
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
8 Drosophila melanogaster GSM360256-14324 TGGACGGAGAACTGATAAGGGC CCTTATCATTCTCTCGCCCCG down 4 1


Secondary structure

GGGTTGGCCGGTGCATTCGTACCCTTATCATTCTCTCGCCCCGTGTGCACTTAAAGACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAATTCATCA
----------------------CCTTATCATTCTCTCGCCCCGT 	6
-------------------------------------------------------------TGGACGGAGAACTGATAAGGG 	102
-------------------------------------------------------------TGGACGGAGAACTGATAAG 	9
-------------------------------------------------------------TGGACGGAGAACTGATAAGGGCT 	1
-------------------------------------------------------------TGGACGGAGAACTGATAAGGGC 	577
-------------------------------------------------------------TGGACGGAGAACTGATAAGG 	32
--------------------------------------------------------------GGACGGAGAACTGATAAGGGC 	1
---------------------------------------------------------------GACGGAGAACTGATAAGGGC 	2

Overlaps with: MNEST036393 MNEST036394
Overlaps with miRBase pre-miRNAs: dme-mir-184
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
9 Drosophila melanogaster GSM286605-9793 TGGACGGAGAACTGATAAGGGC CCTTATCATTCTCTCGCCCCG down 4 1


Secondary structure

GGGTTGGCCGGTGCATTCGTACCCTTATCATTCTCTCGCCCCGTGTGCACTTAAAGACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAATTCATCA
----------------------CCTTATCATTCTCTCGCCCCGTG 	2
----------------------CCTTATCATTCTCTCGCCCCG 	24
----------------------CCTTATCATTCTCTCGCCCCGT 	64
----------------------CCTTATCATTCTCTCGCCCC 	8
-------------------------------------------------------------TGGACGGAGAACTGATAAGGGC 	2714
-------------------------------------------------------------TGGACGGAGAACTGATAAGGG 	1057
-------------------------------------------------------------TGGACGGAGAACTGATAAG 	41
-------------------------------------------------------------TGGACGGAGAACTGATAAGGGCT 	15
-------------------------------------------------------------TGGACGGAGAACTGATAAGG 	319
--------------------------------------------------------------GGACGGAGAACTGATAAGGGC 	2
--------------------------------------------------------------GGACGGAGAACTGATAAGGG 	5

Overlaps with: MNEST036393 MNEST036394
Overlaps with miRBase pre-miRNAs: dme-mir-184
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
10 Drosophila melanogaster GSM343833-15151 TGGACGGAGAACTGATAAGGGC CCTTATCATTCTCTCGCCCCG down 4 1


Secondary structure

GGGTTGGCCGGTGCATTCGTACCCTTATCATTCTCTCGCCCCGTGTGCACTTAAAGACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAATTCATCA
---------------------CCCTTATCATTCTCTCGCCCCG 	1
----------------------CCTTATCATTCTCTCGCCCCGTG 	3
----------------------CCTTATCATTCTCTCGCCCCG 	114
----------------------CCTTATCATTCTCTCGCCC 	4
----------------------CCTTATCATTCTCTCGCCCCGT 	133
----------------------CCTTATCATTCTCTCGCCCC 	8
-----------------------CTTATCATTCTCTCGCCCCGT 	1
-----------------------------------------------------------ACTGGACGGAGAACTGATAAGGGC 	2
------------------------------------------------------------CTGGACGGAGAACTGATAAGGG 	233
------------------------------------------------------------CTGGACGGAGAACTGATAAG 	3
------------------------------------------------------------CTGGACGGAGAACTGATAAGGGCT 	4
------------------------------------------------------------CTGGACGGAGAACTGATAAGG 	50
------------------------------------------------------------CTGGACGGAGAACTGATAAGGGC 	536
-------------------------------------------------------------TGGACGGAGAACTGATAAGGGC 	252215
-------------------------------------------------------------TGGACGGAGAACTGATAAGGG 	118529
-------------------------------------------------------------TGGACGGAGAACTGATAAG 	2075
-------------------------------------------------------------TGGACGGAGAACTGATAAGGGCTC 	10
-------------------------------------------------------------TGGACGGAGAACTGATAAGGGCT 	2753
-------------------------------------------------------------TGGACGGAGAACTGATAAGG 	20447
--------------------------------------------------------------GGACGGAGAACTGATAAGG 	15
--------------------------------------------------------------GGACGGAGAACTGATAAGGGC 	209
--------------------------------------------------------------GGACGGAGAACTGATAAGGG 	67
--------------------------------------------------------------GGACGGAGAACTGATAAGGGCT 	6
---------------------------------------------------------------GACGGAGAACTGATAAGGGC 	56
---------------------------------------------------------------GACGGAGAACTGATAAGGG 	24
----------------------------------------------------------------ACGGAGAACTGATAAGGGC 	20

Overlaps with: MNEST036393 MNEST036394
Overlaps with miRBase pre-miRNAs: dme-mir-184
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
11 Drosophila melanogaster GSM343832-15149 TGGACGGAGAACTGATAAGGGC CCTTATCATTCTCTCGCCCCG down 4 1


Secondary structure

GGGTTGGCCGGTGCATTCGTACCCTTATCATTCTCTCGCCCCGTGTGCACTTAAAGACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAATTCATCA
----------------------CCTTATCATTCTCTCGCCCCGTG 	1
----------------------CCTTATCATTCTCTCGCCCCG 	25
----------------------CCTTATCATTCTCTCGCCCCGT 	14
----------------------CCTTATCATTCTCTCGCCCC 	3
-----------------------------------------------------------ACTGGACGGAGAACTGATAAGGGC 	1
------------------------------------------------------------CTGGACGGAGAACTGATAAGGG 	261
------------------------------------------------------------CTGGACGGAGAACTGATAAG 	2
------------------------------------------------------------CTGGACGGAGAACTGATAAGGGCT 	10
------------------------------------------------------------CTGGACGGAGAACTGATAAGG 	79
------------------------------------------------------------CTGGACGGAGAACTGATAAGGGC 	1498
-------------------------------------------------------------TGGACGGAGAACTGATAAGGGC 	693630
-------------------------------------------------------------TGGACGGAGAACTGATAAGGG 	113415
-------------------------------------------------------------TGGACGGAGAACTGATAAG 	1523
-------------------------------------------------------------TGGACGGAGAACTGATAAGGGCTC 	26
-------------------------------------------------------------TGGACGGAGAACTGATAAGGGCT 	3232
-------------------------------------------------------------TGGACGGAGAACTGATAAGG 	19418
--------------------------------------------------------------GGACGGAGAACTGATAAGG 	10
--------------------------------------------------------------GGACGGAGAACTGATAAGGGC 	750
--------------------------------------------------------------GGACGGAGAACTGATAAGGG 	81
--------------------------------------------------------------GGACGGAGAACTGATAAGGGCT 	4
---------------------------------------------------------------GACGGAGAACTGATAAGGGC 	111
---------------------------------------------------------------GACGGAGAACTGATAAGGG 	19
---------------------------------------------------------------GACGGAGAACTGATAAGGGCT 	3
----------------------------------------------------------------ACGGAGAACTGATAAGGGC 	57

Overlaps with: MNEST036393 MNEST036394
Overlaps with miRBase pre-miRNAs: dme-mir-184
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
12 Drosophila melanogaster GSM399100-5263 TGGACGGAGAACTGATAAGGGC CCTTATCATTCTCTCGCCCCG down 4 1


Secondary structure

GGGTTGGCCGGTGCATTCGTACCCTTATCATTCTCTCGCCCCGTGTGCACTTAAAGACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAATTCATCA
----------------------CCTTATCATTCTCTCGCCCCG 	4
----------------------CCTTATCATTCTCTCGCCCCGT 	3
------------------------TTATCATTCTCTCGCCCCGTGT 	1
------------------------TTATCATTCTCTCGCCCCGT 	1
----------------------------------------------------------AACTGGACGGAGAACTGATAAGGGC 	1
-----------------------------------------------------------ACTGGACGGAGAACTGATAAGGGC 	1
------------------------------------------------------------CTGGACGGAGAACTGATAAGGG 	261
------------------------------------------------------------CTGGACGGAGAACTGATAAG 	4
------------------------------------------------------------CTGGACGGAGAACTGATAAGGGCT 	17
------------------------------------------------------------CTGGACGGAGAACTGATAAGG 	54
------------------------------------------------------------CTGGACGGAGAACTGATAAGGGC 	2245
-------------------------------------------------------------TGGACGGAGAACTGATAAGGGC 	1016230
-------------------------------------------------------------TGGACGGAGAACTGATAAGGG 	133672
-------------------------------------------------------------TGGACGGAGAACTGATAAG 	1391
-------------------------------------------------------------TGGACGGAGAACTGATAAGGGCTC 	127
-------------------------------------------------------------TGGACGGAGAACTGATAAGGGCT 	5648
-------------------------------------------------------------TGGACGGAGAACTGATAAGG 	16902
--------------------------------------------------------------GGACGGAGAACTGATAAGG 	8
--------------------------------------------------------------GGACGGAGAACTGATAAGGGC 	636
--------------------------------------------------------------GGACGGAGAACTGATAAGGG 	76
--------------------------------------------------------------GGACGGAGAACTGATAAGGGCT 	1
---------------------------------------------------------------GACGGAGAACTGATAAGGGC 	157
---------------------------------------------------------------GACGGAGAACTGATAAGGG 	10
---------------------------------------------------------------GACGGAGAACTGATAAGGGCTC 	2
----------------------------------------------------------------ACGGAGAACTGATAAGGGC 	57
----------------------------------------------------------------ACGGAGAACTGATAAGGGCTC 	1

Overlaps with: MNEST036393 MNEST036394
Overlaps with miRBase pre-miRNAs: dme-mir-184
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
13 Drosophila melanogaster GSM360260-14326 TGGACGGAGAACTGATAAGGGC CCTTATCATTCTCTCGCCCCG down 4 1


Secondary structure

GGGTTGGCCGGTGCATTCGTACCCTTATCATTCTCTCGCCCCGTGTGCACTTAAAGACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAATTCATCA
----------------------CCTTATCATTCTCTCGCCCCGT 	50
----------------------CCTTATCATTCTCTCGCCCCG 	5
------------------------TTATCATTCTCTCGCCCCGT 	2
------------------------------------------------------------CTGGACGGAGAACTGATAAGGG 	1
------------------------------------------------------------CTGGACGGAGAACTGATAAGG 	1
-------------------------------------------------------------TGGACGGAGAACTGATAAGGG 	2593
-------------------------------------------------------------TGGACGGAGAACTGATAAG 	106
-------------------------------------------------------------TGGACGGAGAACTGATAAGGGCT 	34
-------------------------------------------------------------TGGACGGAGAACTGATAAGGGC 	9074
-------------------------------------------------------------TGGACGGAGAACTGATAAGG 	853
--------------------------------------------------------------GGACGGAGAACTGATAAGGGC 	20
--------------------------------------------------------------GGACGGAGAACTGATAAGGG 	3
--------------------------------------------------------------GGACGGAGAACTGATAAGG 	5
---------------------------------------------------------------GACGGAGAACTGATAAGGGC 	3
---------------------------------------------------------------GACGGAGAACTGATAAGGG 	1
----------------------------------------------------------------ACGGAGAACTGATAAGGGC 	1

Overlaps with: MNEST036393 MNEST036394
Overlaps with miRBase pre-miRNAs: dme-mir-184
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
14 Drosophila melanogaster GSM322543-14323 TGGACGGAGAACTGATAAGGGC CCTTATCATTCTCTCGCCCCG down 4 1


Secondary structure

GGGTTGGCCGGTGCATTCGTACCCTTATCATTCTCTCGCCCCGTGTGCACTTAAAGACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAATTCATCA
----------------------CCTTATCATTCTCTCGCCCCGT 	302
----------------------CCTTATCATTCTCTCGCCCCG 	96
----------------------CCTTATCATTCTCTCGCCCC 	3
------------------------TTATCATTCTCTCGCCCCGT 	2
------------------------------------------------------------CTGGACGGAGAACTGATAAGGG 	5
------------------------------------------------------------CTGGACGGAGAACTGATAAGG 	6
-------------------------------------------------------------TGGACGGAGAACTGATAAGGGCT 	233
-------------------------------------------------------------TGGACGGAGAACTGATAAGGG 	14745
-------------------------------------------------------------TGGACGGAGAACTGATAAGGGC 	34338
-------------------------------------------------------------TGGACGGAGAACTGATAAG 	1253
-------------------------------------------------------------TGGACGGAGAACTGATAAGG 	6769
--------------------------------------------------------------GGACGGAGAACTGATAAGGGC 	107
--------------------------------------------------------------GGACGGAGAACTGATAAGGG 	10
--------------------------------------------------------------GGACGGAGAACTGATAAGG 	44
---------------------------------------------------------------GACGGAGAACTGATAAGGG 	1
---------------------------------------------------------------GACGGAGAACTGATAAGGGC 	8

Overlaps with: MNEST036393 MNEST036394
Overlaps with miRBase pre-miRNAs: dme-mir-184
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
15 Drosophila melanogaster GSM286607-9796 TGGACGGAGAACTGATAAGGGC CCTTATCATTCTCTCGCCCCG down 4 1


Secondary structure

GGGTTGGCCGGTGCATTCGTACCCTTATCATTCTCTCGCCCCGTGTGCACTTAAAGACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAATTCATCA
----------------------CCTTATCATTCTCTCGCCCCGTG 	2
----------------------CCTTATCATTCTCTCGCCCCGT 	192
----------------------CCTTATCATTCTCTCGCCCCG 	11
-------------------------------------------------------------TGGACGGAGAACTGATAAGGG 	638
-------------------------------------------------------------TGGACGGAGAACTGATAAG 	15
-------------------------------------------------------------TGGACGGAGAACTGATAAGGGCT 	17
-------------------------------------------------------------TGGACGGAGAACTGATAAGGGC 	8041
-------------------------------------------------------------TGGACGGAGAACTGATAAGG 	87
--------------------------------------------------------------GGACGGAGAACTGATAAGGGC 	18
---------------------------------------------------------------GACGGAGAACTGATAAGGGC 	1

Overlaps with: MNEST036393 MNEST036394
Overlaps with miRBase pre-miRNAs: dme-mir-184
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
16 Drosophila melanogaster GSM399101-5265 TGGACGGAGAACTGATAAGGGC CCTTATCATTCTCTCGCCCCG down 4 1


Secondary structure

GGGTTGGCCGGTGCATTCGTACCCTTATCATTCTCTCGCCCCGTGTGCACTTAAAGACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAATTCATCA
----------------------CCTTATCATTCTCTCGCCCCG 	34
----------------------CCTTATCATTCTCTCGCCCCGT 	44
----------------------CCTTATCATTCTCTCGCCCC 	2
-----------------------CTTATCATTCTCTCGCCCCGT 	1
----------------------------------------------------------AACTGGACGGAGAACTGATAAGG 	1
-----------------------------------------------------------ACTGGACGGAGAACTGATAAGGGC 	1
------------------------------------------------------------CTGGACGGAGAACTGATAAGGG 	260
------------------------------------------------------------CTGGACGGAGAACTGATAAG 	3
------------------------------------------------------------CTGGACGGAGAACTGATAAGGGCT 	10
------------------------------------------------------------CTGGACGGAGAACTGATAAGG 	44
------------------------------------------------------------CTGGACGGAGAACTGATAAGGGC 	651
-------------------------------------------------------------TGGACGGAGAACTGATAAGGGC 	307684
-------------------------------------------------------------TGGACGGAGAACTGATAAGGG 	138863
-------------------------------------------------------------TGGACGGAGAACTGATAAG 	2346
-------------------------------------------------------------TGGACGGAGAACTGATAAGGGCTC 	54
-------------------------------------------------------------TGGACGGAGAACTGATAAGGGCT 	3942
-------------------------------------------------------------TGGACGGAGAACTGATAAGG 	16783
--------------------------------------------------------------GGACGGAGAACTGATAAGG 	10
--------------------------------------------------------------GGACGGAGAACTGATAAGGGC 	167
--------------------------------------------------------------GGACGGAGAACTGATAAGGG 	77
--------------------------------------------------------------GGACGGAGAACTGATAAGGGCT 	4
---------------------------------------------------------------GACGGAGAACTGATAAGGGC 	36
---------------------------------------------------------------GACGGAGAACTGATAAGGG 	9
----------------------------------------------------------------ACGGAGAACTGATAAGGGC 	18
----------------------------------------------------------------ACGGAGAACTGATAAGGGCT 	1

Overlaps with: MNEST036393 MNEST036394
Overlaps with miRBase pre-miRNAs: dme-mir-184
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
17 Drosophila melanogaster GSM286604-9792 TGGACGGAGAACTGATAAGGGC CCTTATCATTCTCTCGCCCCG down 4 1


Secondary structure

GGGTTGGCCGGTGCATTCGTACCCTTATCATTCTCTCGCCCCGTGTGCACTTAAAGACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAATTCATCA
----------------------CCTTATCATTCTCTCGCCC 	1
----------------------CCTTATCATTCTCTCGCCCCGT 	29
----------------------CCTTATCATTCTCTCGCCCCG 	19
----------------------CCTTATCATTCTCTCGCCCC 	1
-------------------------------------------------------------TGGACGGAGAACTGATAAGGG 	4779
-------------------------------------------------------------TGGACGGAGAACTGATAAG 	336
-------------------------------------------------------------TGGACGGAGAACTGATAAGGGCT 	45
-------------------------------------------------------------TGGACGGAGAACTGATAAGGGC 	7489
-------------------------------------------------------------TGGACGGAGAACTGATAAGG 	2059
--------------------------------------------------------------GGACGGAGAACTGATAAGGGC 	11
--------------------------------------------------------------GGACGGAGAACTGATAAGGG 	19
--------------------------------------------------------------GGACGGAGAACTGATAAGG 	15
---------------------------------------------------------------GACGGAGAACTGATAAGGGC 	4
---------------------------------------------------------------GACGGAGAACTGATAAGGG 	3
----------------------------------------------------------------ACGGAGAACTGATAAGGGC 	4

Overlaps with: MNEST036393 MNEST036394
Overlaps with miRBase pre-miRNAs: dme-mir-184
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
18 Drosophila melanogaster GSM385744-16261 TGGACGGAGAACTGATAAGGGC CCTTATCATTCTCTCGCCCCG down 4 1


Secondary structure

GGGTTGGCCGGTGCATTCGTACCCTTATCATTCTCTCGCCCCGTGTGCACTTAAAGACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAATTCATCA
--------------------ACCCTTATCATTCTCTCGCCCCGT 	1
----------------------CCTTATCATTCTCTCGCCCCG 	15
----------------------CCTTATCATTCTCTCGCCC 	6
----------------------CCTTATCATTCTCTCGCCCC 	4
----------------------CCTTATCATTCTCTCGCCCCGT 	50
-----------------------CTTATCATTCTCTCGCCCC 	1
-----------------------CTTATCATTCTCTCGCCCCGT 	1
-----------------------CTTATCATTCTCTCGCCCCG 	1
------------------------------------------------------------CTGGACGGAGAACTGATAAGGGC 	12
------------------------------------------------------------CTGGACGGAGAACTGATAA 	1
------------------------------------------------------------CTGGACGGAGAACTGATAAGGG 	2
-------------------------------------------------------------TGGACGGAGAACTGATAAGGG 	924
-------------------------------------------------------------TGGACGGAGAACTGATAAGG 	589
-------------------------------------------------------------TGGACGGAGAACTGATAAGGGC 	9337
-------------------------------------------------------------TGGACGGAGAACTGATAAG 	141
-------------------------------------------------------------TGGACGGAGAACTGATAAGGGCT 	160
--------------------------------------------------------------GGACGGAGAACTGATAAGGGC 	9
--------------------------------------------------------------GGACGGAGAACTGATAAGGGCT 	1
---------------------------------------------------------------GACGGAGAACTGATAAGGGC 	4
----------------------------------------------------------------------------TAAGGGCTCGTATCACCAATT 	1

Overlaps with: MNEST036393 MNEST036394
Overlaps with miRBase pre-miRNAs: dme-mir-184
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
19 Drosophila melanogaster GSM322208-14317 TGGACGGAGAACTGATAAGGGC CCTTATCATTCTCTCGCCCCG down 4 1


Secondary structure

GGGTTGGCCGGTGCATTCGTACCCTTATCATTCTCTCGCCCCGTGTGCACTTAAAGACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAATTCATCA
----------------------CCTTATCATTCTCTCGCCCCG 	8
----------------------CCTTATCATTCTCTCGCCCCGT 	23
------------------------------------------------------------CTGGACGGAGAACTGATAAGGG 	1
-------------------------------------------------------------TGGACGGAGAACTGATAAGGGC 	1715
-------------------------------------------------------------TGGACGGAGAACTGATAAGGGCTCGT 	2
-------------------------------------------------------------TGGACGGAGAACTGATAAGGG 	818
-------------------------------------------------------------TGGACGGAGAACTGATAAG 	266
-------------------------------------------------------------TGGACGGAGAACTGATAAGGGCTCG 	1
-------------------------------------------------------------TGGACGGAGAACTGATAAGGGCT 	17
-------------------------------------------------------------TGGACGGAGAACTGATAAGG 	634
--------------------------------------------------------------GGACGGAGAACTGATAAGG 	3
--------------------------------------------------------------GGACGGAGAACTGATAAGGGC 	8
--------------------------------------------------------------GGACGGAGAACTGATAAGGG 	1
---------------------------------------------------------------GACGGAGAACTGATAAGGGC 	2
----------------------------------------------------------------ACGGAGAACTGATAAGGGC 	1

Overlaps with: MNEST036393 MNEST036394
Overlaps with miRBase pre-miRNAs: dme-mir-184
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
20 Drosophila melanogaster GSM385748-16264 TGGACGGAGAACTGATAAGGGC CCTTATCATTCTCTCGCCCCG down 4 1


Secondary structure

GGGTTGGCCGGTGCATTCGTACCCTTATCATTCTCTCGCCCCGTGTGCACTTAAAGACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAATTCATCA
--------------------ACCCTTATCATTCTCTCGCCCCGT 	2
----------------------CCTTATCATTCTCTCGCCCCG 	35
----------------------CCTTATCATTCTCTCGCCC 	12
----------------------CCTTATCATTCTCTCGCCCC 	13
----------------------CCTTATCATTCTCTCGCCCCGT 	109
-----------------------CTTATCATTCTCTCGCCCCGT 	1
-----------------------CTTATCATTCTCTCGCCCCG 	1
-----------------------CTTATCATTCTCTCGCCCC 	2
------------------------------------------------------------CTGGACGGAGAACTGATAA 	1
------------------------------------------------------------CTGGACGGAGAACTGATAAGGG 	7
------------------------------------------------------------CTGGACGGAGAACTGATAAG 	2
------------------------------------------------------------CTGGACGGAGAACTGATAAGG 	1
------------------------------------------------------------CTGGACGGAGAACTGATAAGGGC 	29
-------------------------------------------------------------TGGACGGAGAACTGATAAGGG 	1899
-------------------------------------------------------------TGGACGGAGAACTGATAAGGGCTC 	1
-------------------------------------------------------------TGGACGGAGAACTGATAAGG 	1174
-------------------------------------------------------------TGGACGGAGAACTGATAAGGGC 	18074
-------------------------------------------------------------TGGACGGAGAACTGATAAG 	289
-------------------------------------------------------------TGGACGGAGAACTGATAAGGGCT 	294
--------------------------------------------------------------GGACGGAGAACTGATAAGGGC 	15
--------------------------------------------------------------GGACGGAGAACTGATAAGGG 	1
--------------------------------------------------------------GGACGGAGAACTGATAAGGGCT 	2
---------------------------------------------------------------GACGGAGAACTGATAAGGG 	2
---------------------------------------------------------------GACGGAGAACTGATAAGGGC 	8
----------------------------------------------------------------ACGGAGAACTGATAAGGGC 	1
----------------------------------------------------------------------------TAAGGGCTCGTATCACCAATT 	1

Overlaps with: MNEST036393 MNEST036394
Overlaps with miRBase pre-miRNAs: dme-mir-184
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
21 Drosophila melanogaster GSM399110-16285 TGGACGGAGAACTGATAAGGGC CCTTATCATTCTCTCGCCCCG down 4 1


Secondary structure

GGGTTGGCCGGTGCATTCGTACCCTTATCATTCTCTCGCCCCGTGTGCACTTAAAGACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAATTCATCA
-------------------TACCCTTATCATTCTCTCGCCCCG 	2
--------------------ACCCTTATCATTCTCTCGCCCC 	2
--------------------ACCCTTATCATTCTCTCGCCC 	1
----------------------CCTTATCATTCTCTCGCCC 	143
----------------------CCTTATCATTCTCTCGCCCCGTG 	10
----------------------CCTTATCATTCTCTCGCCCCGT 	2086
----------------------CCTTATCATTCTCTCGCCCCG 	4158
----------------------CCTTATCATTCTCTCGCCCC 	574
-----------------------CTTATCATTCTCTCGCCCCG 	5
-----------------------CTTATCATTCTCTCGCCCCGT 	2
------------------------TTATCATTCTCTCGCCCCG 	2
------------------------TTATCATTCTCTCGCCCCGT 	1
--------------------------------------------------------ACAACTGGACGGAGAACTGATAAGG 	1
------------------------------------------------------------CTGGACGGAGAACTGATAAGGG 	11
------------------------------------------------------------CTGGACGGAGAACTGATAAGGGC 	2
------------------------------------------------------------CTGGACGGAGAACTGATAAG 	8
------------------------------------------------------------CTGGACGGAGAACTGATAAGG 	6
-------------------------------------------------------------TGGACGGAGAACTGATAAGGG 	90499
-------------------------------------------------------------TGGACGGAGAACTGATAAG 	6009
-------------------------------------------------------------TGGACGGAGAACTGATAAGGGCT 	1209
-------------------------------------------------------------TGGACGGAGAACTGATAAGGGC 	134637
-------------------------------------------------------------TGGACGGAGAACTGATAAGG 	39614
--------------------------------------------------------------GGACGGAGAACTGATAAGGGC 	649
--------------------------------------------------------------GGACGGAGAACTGATAAGGG 	365
--------------------------------------------------------------GGACGGAGAACTGATAAGG 	116
--------------------------------------------------------------GGACGGAGAACTGATAAGGGCT 	10
---------------------------------------------------------------GACGGAGAACTGATAAGGGC 	64
---------------------------------------------------------------GACGGAGAACTGATAAGGG 	23
----------------------------------------------------------------ACGGAGAACTGATAAGGGC 	31

Overlaps with: MNEST036393 MNEST036394
Overlaps with miRBase pre-miRNAs: dme-mir-184
HuntMi prediction: true miRNA